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* [svn-r29903] merge from trunk.Mohamad Chaarawi2016-05-094-121/+239
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| * [svn-r29531] Normalization w/ revise_chunks in preparation for big merge.Dana Robinson2016-03-231-1/+1
| | | | | | | | | | | | | | hl and bin directories Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial w/ Java, Fortran, & C++
| * [svn-r29379] Add individual LT_VERS_* variables for wrapper libraries: c++, ↵Larry Knox2016-03-091-7/+11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | fortran, java, hl, hl/c++, hl/fortran to so that the shared object version numbers can be incremented independently. Disabled auto-increment of shared object version numbers by h5vers. Files modified: config/lt_vers.am java/src/jni/Makefile.am hl/src/Makefile.am hl/c++/src/Makefile.am hl/fortran/src/Makefile.am c++/src/Makefile.am bin/h5vers fortran/src/Makefile.am
| * [svn-r29350] Revert h5check_version change to check LT_VERS_XXXX numbers ↵Larry Knox2016-03-081-40/+20
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | rather than HDF5 library version numbers. Svn revisions reverted: 29341, 29326 Branch features/h5check_version was created for further development. Files changed test/tcheck_version.c test/testcheck_version.sh.in src/H5public.h src/H5.c config/lt_vers.am bin/h5vers Tested with h5committest.new
| * [svn-r29326] HDFFV-9536: Changed H5check_version() to use libtool shared ↵Albert Cheng2016-03-071-20/+40
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | library version numbers instead of the library version numbers. bin/h5vers: Changed to copy the shared lib version from lt_vers.am to H5public.h (Thanks to Larry who made the changes.) config/lt_vers.am: cosmetic change, nothing material. src/H5public.h: Changed by bin/h5vers. src/H5.c: Changed H5check_version() to use shared library version for compatibility checking. test/tcheck_version.c: test/testcheck_version.sh.in: Changed to use shared library version numbers instead of the HDF5 library version numbers for testing. Tested: tested in Jam (C only), platypus and osx1010dev (enable fortran and C++).
| * [svn-r28949] HDFFV-9660: add an option to enable threadsafe feature in cmakehdf5Albert Cheng2016-01-211-0/+10
| | | | | | | | | | | | | | Tested: platypus. There are still something strange messages during the configure step. Waiting for Allen to response.
| * [svn-r28881] Merged r28880 from revise_chunks. Adds a script to flip maint mode.Dana Robinson2016-01-131-0/+83
| | | | | | | | Tested on: linux VM
| * [svn-r28853] HDFFV-9649: cmakehdf5 needs a proper implementation to verify ↵Albert Cheng2016-01-111-2/+11
| | | | | | | | | | | | | | | | | | the installation images created for Mac OSX. The current implementation for Mac OSX platform is a kludge that sometimes left behind mounted volumes. Temporary screen out the checking of installtion_check step (so that daily test may pass). Tested: by hand running cmakehdf5 in platypus and osx1010test.
| * [svn-r28841] indentations were messed up by some previous commit.Albert Cheng2016-01-071-111/+111
| | | | | | | | | | | | Restored them to more readable spacing. No code change. Test: visual inspection.
| * [svn-r28788] Added extern C block to H5Epubgen.h (via bin/make_err).Dana Robinson2016-01-041-0/+12
| | | | | | | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
* | [svn-r28715] - merge from trunkMohamad Chaarawi2015-12-215-368/+425
|\ \ | |/ | | | | - fix farray, earray, and btree test to use correct function to retrieve internal file struct.
| * [svn-r28638] HDFFV-9273: cmakehdf5 --script failed in linux platypusAlbert Cheng2015-12-141-266/+0
| | | | | | | | | | | | Solution: remove --script option from cmakehdf5. Tested: platypus
| * [svn-r28565] Normalization of bin/trace with revise_chunks in preparationDana Robinson2015-12-111-0/+4
| | | | | | | | | | | | | | for merge. Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) bin/trace run only
| * [svn-r28563] HDFFV-9612: added ability to run multiple make commands.Albert Cheng2015-12-101-3/+18
| | | | | | | | | | | | | | Added --njobs option to special number of jobs (-j N) to allow multiple commands during build (cmamke) and testing (ctest). Tested: platypus.
| * [svn-r28553] Merge of r28436 from revise_chunks. Cleans up warnings exposedDana Robinson2015-12-101-1/+3
| | | | | | | | | | | | | | by gcc 5.2 in the flex/bison code. Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
| * [svn-r28393] HDFFV-9573: bin/h5vers failure, claiming reconfigure failed.Albert Cheng2015-11-181-3/+3
| | | | | | | | | | | | | | | | bin/reconfigure is replaced by autogen.sh. Fixed h5vers to call autogen.sh instead. Tested: Jam
| * [svn-r28388] HDFFV-9573: bin/chkmanifest did not like the missing generated ↵Albert Cheng2015-11-181-0/+16
| | | | | | | | | | | | | | | | file. Changed bin/chkmanifest to generate the files if configure is missing. Tested: jam
| * [svn-r28371] Update script mode order of commandsAllen Byrne2015-11-171-135/+140
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| * [svn-r28342] DAILYTEST-195: Osx1010test has culmulated a lot of mounted ↵Albert Cheng2015-11-131-2/+33
| | | | | | | | | | | | | | | | | | | | | | | | | | | | volumes from cmakehdf5 installation. Tried to find out what went wrong but all output files were deleted already. Added a verbose option to display all cmake process output in order to see what might have gone wrong. Default is on. Using --disable-verbose will turn it off. Tested: osx1010dev, osx1010test, playtypus.
| * [svn-r28332] Updated autogen.sh to not run flex/bison.Dana Robinson2015-11-131-0/+250
| | | | | | | | | | | | | | | | | | This was giving a lot of users headaches and the parser code rarely changes. There is now a new script (bin/genparser) which can be run as needed. Tested on: Ubuntu 15.10 (x86_64 Linux 4.2.0) gcc 5.2.1, flex 2.5.39, bison 3.0.2
* | [svn-r28288] merge from trunk.Mohamad Chaarawi2015-11-051-1/+0
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| * [svn-r27997] Autogen.sh is no longer marked _DO_NOT_DISTRIBUTE_ in the ↵Larry Knox2015-10-071-1/+0
| | | | | | | | MANIFEST file. Therefore bbrelease does not need to expressly add it to the source tar file.
* | [svn-r27972] merge from trunk.Mohamad Chaarawi2015-10-061-0/+1
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| * [svn-r27918] Brought in sync with the trunk:Dana Robinson2015-09-301-1/+1
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | r27860-27883 r27892-27916 Tested on: - h5committest - jam (parallel) fails with an existing, unrelated MPI config error - platypus fails with due to an existing, unrelated cmakehdf5 error where it does not recognize --enable-fortran2003.
| * \ [svn-r27842] Description:Quincey Koziol2015-09-211-2/+20
| |\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | Sync w/trunk. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (although not CMake) (h5committest not required on this branch)
| * \ \ [svn-r27835] Description:Quincey Koziol2015-09-2114-14716/+17
| |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Sync w/trunk. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
| * \ \ \ [svn-r27630] Description:Quincey Koziol2015-08-311-1/+1
| |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring in changes from the trunk, through r27628. Tested on: MacOSX/64 10.10.5 (amazon) w/serial (h5committest not required on this branch)
| * \ \ \ \ [svn-r27593] Merge revisions 27453 through 27592 from trunk to vds branch.Neil Fortner2015-08-272-44/+1
| |\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| * \ \ \ \ \ [svn-r27397] Merge revisions 27255 through 27393 from trunk to vds branch.Neil Fortner2015-07-151-0/+394
| |\ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| * \ \ \ \ \ \ [svn-r27191] Merged r26781 to r27185 from trunkDana Robinson2015-06-111-1/+1
| |\ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested on: 64-bit Ubuntu Linux VM w/ gcc 4.8.2 (C++ and Fortran 2003 also tested)
| * | | | | | | | [svn-r27152] Updated bin/trace and src/H5trace.c to handle the H5D_vds_view_tDana Robinson2015-06-041-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | enum type. Tested on: jam
* | | | | | | | | [svn-r27959] - merge from trunk (pre-VDS)Mohamad Chaarawi2015-10-0514-14719/+38
|\ \ \ \ \ \ \ \ \ | | |_|_|_|_|_|_|/ | |/| | | | | | | | | | | | | | | | - fix VOL initialization and Native plugin registration with new FAPL changes
| * | | | | | | | [svn-r27900] Modify bbrelease to use "Revision:" number from svn info, not ↵Larry Knox2015-09-281-1/+1
| | |_|_|_|_|_|/ | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | "Last Changed Rev:" number. Tested on jam
| * | | | | | | [svn-r27836] HDFFV-8932: added option --with-szlib to support szip library ↵Albert Cheng2015-09-211-2/+20
| | |_|_|_|_|/ | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | support. Tested: platypus 32 or 64bit, with or without zlib.
| * | | | | | [svn-r27831] HDF5-0: Removed enable-fortran2003 which is no longer needed.Albert Cheng2015-09-181-11/+7
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | HDFFV-8932: added option to specify which zlib to use. Tested: platypus 32 or 64bit, with or without zlib.
| * | | | | | [svn-r27826] Modify bbrelease to add autogen.sh to the source tarball.Larry Knox2015-09-181-0/+1
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| * | | | | | [svn-r27819] bbrelease is a modified copy of the release script, which ↵Larry Knox2015-09-171-1/+9
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | checks for the "configure" file to verify that it is in the top level HDF5 directory. bbrelease creates a tar file for buildbot testing, and since configure is no longer checked in, the script failed. configure.ac should always be present in the top level source directory, even before running autogen.sh, so it should be a workable substitute for the verification. Tested with h5committest.
| * | | | | | [svn-r27775] Undo of r27655Dana Robinson2015-09-1416-12/+12
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Removes .pl extension from Perl scripts. This may be returned in the future, but it's best to keep the script names unchanged while we merge with the trunk. Tested on: h5committest
| * | | | | | [svn-r27655] Add .pl extension to Perl scripts in bin (part of HDFFV-9513)Dana Robinson2015-09-0116-12/+12
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This makes things easier on Windows, where we will have to run Perl scripts as a part of CMake. Tested on: jam
| * | | | | | [svn-r27638] Merged r27500-27631 from trunk.Dana Robinson2015-09-012-44/+1
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| * | | | | | [svn-r27507] Merge of r27237-27500 from the trunk.Dana Robinson2015-08-142-1/+395
| |\ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested w/ h5committest NOTES: - The manifest may still be messed up. - Cmake fails since the dual binary work needs to be merged with this repo's CMake externals.
| * \ \ \ \ \ \ [svn-r27222] Merge of r27035-27221 from the trunk.Dana Robinson2015-06-171-1/+1
| |\ \ \ \ \ \ \ | | | |_|_|/ / / | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested on 64-bit linux VM: Serial: C++ and Fortran 2003 Parallel: Fortran
| * | | | | | | [svn-r27038] Merge of r26393-27031 from the trunk.Dana Robinson2015-05-074-20/+140
| |\ \ \ \ \ \ \ | | | |_|_|/ / / | | |/| | | | | | | | | | | | | Tested on 64-bit linux VM w/ C++ and Fortran 2003
| * | | | | | | [svn-r26435] Remove DEFAULT_LIBS from configure.ac and irix6.x config file whichJerome Soumagne2015-03-112-70/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | was using it. Remove references to IRIX/irix* platform.
| * | | | | | | [svn-r26424] Made the chkmanifest script a little more sh-friendly.Dana Robinson2015-03-111-5/+7
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested on: Manually on local Linux by modifying svn-controlled files.
| * | | | | | | [svn-r26350] Merge of r26273-26348 from the trunk.Dana Robinson2015-03-043-15/+10
| |\ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested on: h5committest
| * \ \ \ \ \ \ \ [svn-r26274] Merge of r26096 to r26271 from trunk.Dana Robinson2015-02-222-4/+5
| |\ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested on: jam - serial: C++/Fortran parallel: Fortran
| * | | | | | | | | [svn-r26267] Added comments to the bin/chkmanifest script.Dana Robinson2015-02-211-3/+15
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fixed an issue with missing 'svn ls' code.
| * | | | | | | | | [svn-r26266] Updated bin/chkmanifest to use 'svn stat' and 'svn ls' insteadDana Robinson2015-02-211-90/+34
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | of hacking at the .svn/entries file that changes format all the time.
| * | | | | | | | | [svn-r26229] Removed NO TRACE notifications from bin/trace script.Dana Robinson2015-02-191-6/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fixes: HDFFV-9098 Tested on: 64-bit linux VM (autogen only)