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* Purpose: Fix HDFFV-9532Binh-Minh Ribler2016-10-231-4/+0
| | | | | | | | | | | | | Description: Removed obsolete macros from C++ API library and tests: H5_NO_NAMESPACE and __cplusplus Leave OLD_HEADER_FILENAME because iostream.h might still be in use, until further checking is done. Leave H5_NO_STD to consider retiring H5std_string first. Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* [svn-r30280] Purpose: Code improvement (HDFFR-9725)Binh-Minh Ribler2016-08-121-1/+3
| | | | | | | | | | | | | Description: - Added "const" to arguments that should be const - Added "const" to const functions, i.e., function that don't change the objects they operate on. - Removed deprecated functions in previous releases due to missing const. Merged from trunk: 30272 and 30279 Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29764] Purpose: Code cleanupBinh-Minh Ribler2016-04-221-2/+0
| | | | | | | | | | Description: Removed obsolete overloaded functions which had parameters that should be const but were not. They have been replaced by the correct version since 2014. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r26731] Purpose: Fixed HDFFV-7947Binh-Minh Ribler2015-04-061-5/+10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: When copy constructor or constructor that takes an existing id is invoked, the C ref counter stays the same but there is an extra C++ object which later is destroyed and may cause the HDF5 id to be closed prematurely. The C++ library needs to increment the ref counter in these situations, so that the C library will not close the id when it is still being referenced. However, the incrementing of ref count left some objects opened at the end of the program, perhaps, due to compiler's optimization on cons/destructors. The constructor, that takes an existing id, needs to increment the counter but it seems that the matching destructor wasn't invoked. The workaround is to have a function for each class that has "id" that only sets the id and not increment the ref count for the library to use in these situations. These functions are "friend" and not public. The friend functions are: void f_Attribute_setId(Attribute *, hid_t) void f_DataSet_setId(DataSet *, hid_t) void f_DataSpace_setId(DataSpace *, hid_t) void f_DataType_setId(DataType *, hid_t) Merged from trunk: r26655 Platforms tested: Linux/64 (platypus) Linux/32 2.6 (jam Intel 15.0) SunOS 5.11 (emu)
* [svn-r25062] Description:Binh-Minh Ribler2014-04-181-2/+6
| | | | | | | | | | | | Put back overloaded functions for backward compatibility: - were replaced by better prototyped versions, such as Attribute::getNam. - were modified to add const to constant arguments. Added notes for future removal in documentation. (Elena approved.) Merged from trunk r25061. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r25029] Purpose: Fixed HDFFV-3384Binh-Minh Ribler2014-04-121-3/+3
| | | | | | | | | | | Description: - Added const to const arguments - Fixed miscellaneous comments (merged from trunk-24991) Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24290] Description:Binh-Minh Ribler2013-10-141-2/+7
| | | | | | | | | - Added a lot of documentation to classes for Reference Manual. - Fixed some format inconsistencies Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) Linux/64 2.6 (koala)/PGI compilers
* [svn-r24216] Purpose: Merged changes from trunkBinh-Minh Ribler2013-09-291-16/+7
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description from trunk, r22836 In this bug, H5File doesn't have the ability to create attribute. The following changes will provide that functionality and several others that were also missing: - Added an abstract class H5Location in between IdComponent and H5Object. - New class structure of IdComponent, H5Location, H5Object, H5File IdComponent | H5Location / \ H5Object H5File - Wrappers in H5Object were moved to H5Location because the related C functions take either file, group, dataset, or named datatype ID. - Added wrapper for H5Rget_obj_type2 - Added tests for file attributes and H5Rget_obj_type2 wrapper Description from trunk, r22845 Fixed miscellaneous inconsistencies and typos, which also took care of the failure in Packet Table test on daily test today. Description from trunk, r24143 Fixed comments, documentation, and mis-matched DOXYGEN_SHOULD_SKIP_THIS pairs. Description from trunk, r24188 - The failure in daily test was caused by missing initialization of member "id" in a few constructors. This is now fixed. - Added two overloaded H5Location::setComment - Improved some error reporting in H5Location - Improved error reporting in tests Description from trunk, r24189 Changed header guards from single underscore to double underscore. Platforms tested: SunOS 5.11 (emu) Linux/32 2.6 (jam) Linux/64 2.6 (koala)/PGI compilers
* [svn-r17239] Purpose: Fix bug and improve readabilityBinh-Minh Ribler2009-07-271-1/+8
| | | | | | | | | | | | | | | Description: - Revised DataSet::write to pass in correct string buffer - Added member function DataSet::getInMemDataSize() to simplify getting the dataset's data size in memory. - Added private functions for reading fixed- and variable-len string data: p_read_fixed_len and p_read_variable_len. - Added tests to write/read array of strings to datasets. Platforms tested: Linux/32 2.6 (jam) FreeBSD/64 6.3 (liberty) SunOS 5.10 (linew)
* [svn-r15998] Description:Binh-Minh Ribler2008-10-301-1/+3
| | | | | | | Fixed various comments/headers to update the C++ reference manual. Platforms tested: Linux 2.6 (kagiso) - to make certain no typo introduced
* [svn-r15960] Description:Binh-Minh Ribler2008-10-271-2/+3
| | | | | | | Oops, I accidentally only did "svn commit" instead of "svn commit -m" as instructed. "ported revisions 15958 to 15959 (Added missing wrappers for H5Rdereference) from trunk."
* [svn-r15404] Purpose: Code correctionBinh-Minh Ribler2008-07-251-1/+4
| | | | | | | | | | | Description: Accidentally left p_setId in public section in the previous checkin. Moved it to "protected:" section. Platforms tested: Linux 2.6 (kagiso) SunOS 5.10 (linew) FreeBSD (duty)
* [svn-r15401] Purpose: Fix bugBinh-Minh Ribler2008-07-241-1/+1
| | | | | | | | | | | | | | | | | | | | Description: Changed all subclasses' setId to p_setId and put back setId in IdComponent. p_setId is used in the library where the id provided by a C API passed on to user's application in the form of a C++ API object, which will be destroyed properly, and so p_setId does not call incRefCount. On the other hand, the public version setId is used by other applications, in which the id passed to setId needs to be closed properly by the application, so setId must call incRefCount for the new object to prevent prematurely closing of the id. Platforms tested: Linux 2.6 (kagiso) Still on going with these two platforms, but needed to check in before daily tests start. SunOS 5.10 (linew) FreeBSD (duty)
* [svn-r15046] Purpose: Fixed bugsBinh-Minh Ribler2008-05-201-10/+9
| | | | | | | | | | | | | | | | | | | Description: The class hierarchy was revised to address the problem reported in bugzilla #1068. Classes AbstractDS and Attribute are moved out of H5Object. Class Attribute now multiply inherits from IdComponent and AbstractDs and class DataSet from H5Object and AbstractDs. In addition, data member IdComponent::id was moved into subclasses: Attribute, DataSet, DataSpace, DataType, H5File, Group, and PropList. Also fixed bugzilla 1045: revised Attribute::write and Attribute::read wrappers to handle memory allocation/deallocation properly. (bugzilla 1045) Platforms tested: SunOS 5.10 (linew) Linux 2.6 (kagiso) FreeBSD (duty)
* [svn-r14148] Description:Quincey Koziol2007-09-141-0/+2
| | | | | | | | | | | | | | | | Add H5Rget_obj_type() to the API versioning and switch internal routines to use H5Rget_obj_type2() Misc. other code cleanups, etc. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 2.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r13253] Updated all C and C++ style source code files with the THG ↵Albert Cheng2007-02-071-2/+3
| | | | | | | | | copyright notice. Tested platform: Kagiso only since it is only a comment block change. If it works in one machine, it should work in all, I hope. Still need to check the parallel build on copper.
* [svn-r13092] Purpose: MaintenanceBinh-Minh Ribler2007-01-021-3/+6
| | | | | | | | | | | Description: Added overloaded method DataSet::vlenReclaim, that has better prototype. Fixed some typos. Platforms tested AIX 5.1 (copper) SunOS 5.8 64-bit (sol) Linux 2.6 (kagiso)
* [svn-r12799] Purpose: Fixed typoBinh-Minh Ribler2006-10-221-3/+0
| | | | | | | | Description: Removed a leftover prototype. Platform tested: Linux 2.6 (kagiso) - very minor
* [svn-r12795] Purpose: Fixing bugBinh-Minh Ribler2006-10-221-6/+12
| | | | | | | | | | | | | | | | | | | | | | | | | Description: Wrappers of H5Rcreate had incorrect prototypes. Solution: Added these overloaded functions for H5Rcreate wrapper to IdComponent: void reference(void* ref, const char* name, DataSpace& dataspace, H5R_type_t ref_type = H5R_DATASET_REGION) const; void reference(void* ref, const char* name) const; void reference(void* ref, const H5std_string& name) const; Added these overloaded functions for H5Rdereference: void dereference(IdComponent& obj, void* ref); DataSet(IdComponent& obj, void* ref); Group(IdComponent& obj, void* ref); DataType(IdComponent& obj, void* ref); The incorrect wrappers will be removed after announcing. Platform tested: Linux 2.4 (heping) AIX 5.1 (copper) SunOS 5.8 64-bit (sol)
* [svn-r12200] Purpose: MaintenanceBinh-Minh Ribler2006-04-051-4/+4
| | | | | | | | | | | | Description: Changed to alias string instead of std, i.e. H5std_string instead of H5std, because the old way wasn't working when std didn't exist. Platforms tested: Linux 2.4 (heping) SunOS 5.8 64-bit (sol) HPUX 11.00 (kelgia) - this was the problematic platform but I wasn't able to test before.
* [svn-r12180] Purpose: MaintenanceBinh-Minh Ribler2006-03-301-4/+4
| | | | | | | | | | | Description: Added alias H5_std so either the global or std namespace can be used, depending on H5_NO_STD. Platforms tested: Linux 2.4 (heping) SunOS 5.8 64-bit (sol) AIX 5.1 (copper)
* [svn-r11755] Purpose: Code improvementBinh-Minh Ribler2005-12-031-1/+1
| | | | | | | | | | | | | | | | | Description: There was a workaround for predefined types, in the C++ library, implemented when the C++ library was handling the reference counting of the object ids on its own. Currently, the C++ library is using the available APIs from the C library for that purpose, and there were bugs reported involving that part of the C++ library. So, I decided to remove the workaround completely. Also, improved the use of std members. Platforms tested: Linux 2.4 (heping) SunOS 5.8 64-bit (sol) Linux 2.4 w/PGI (colonelk)
* [svn-r11487] Purpose:Quincey Koziol2005-10-011-12/+12
| | | | | | | | | | | Code cleanup Description: Tweak copyright on C++ source files to reduce whining by copyright checking script. Platforms tested: FreeBSD 4.11 (sleipnir) w/C++
* [svn-r11245] Purpose:Quincey Koziol2005-08-131-3/+3
| | | | | | | | | | | | | | | | | | | | Code cleanup Description: Trim trailing whitespace, which is making 'diff'ing the two branches difficult. Solution: Ran this script in each directory: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r11206] Purpose: Additional wrapper/Code improvementBinh-Minh Ribler2005-08-081-0/+4
| | | | | | | | | | | | | | | | Description: Added wrapper for H5Iget_type. Added try/catch to many APIs that call private functions so that more specific information can be provided at failure. Added IdComponent::inMemFunc to help providing specific info. Added const to parameters of several functions that missed that. Platforms tested: Linux 2.4 (heping) SunOS 5.8 64-bit (sol) AIX 5.1 (copper) IRIX64 with -n32 (modi4) HPUX 11.00 (kelgia)
* [svn-r10212] Purpose: Added more wrappersBinh-Minh Ribler2005-03-141-1/+4
| | | | | | | | | | | | | | | Description: Added the following to the C++ library + overloaded functions: string CommonFG::getObjnameByIdx(hsize_t idx) H5T_order_t AtomType::getOrder() + wrappers for H5*close + wrappers for H5Arename, H5Aget_storage_size, and H5Dget_storage_size Platforms tested: Linux 2.4 (heping) AIX 5.1 (copper) SunOS 5.8 64-bit (sol)
* [svn-r9129] Purpose: Updating documentationBinh-Minh Ribler2004-08-201-20/+21
| | | | | | | | | | Description: Updated various function headers for the RM as reviewing progresses. Rearranged functions in header files for more sensible look of the RM. Platforms tested: SunOS 5.7 (arabica) Linux 2.4 (eirene)
* [svn-r9049] Purpose: Clean up codeBinh-Minh Ribler2004-08-071-3/+0
| | | | | | | | | | | | | Description: Removed private functions p_close, that were left over from the removal of the reference counting mechanism. Platforms tested: SunOS 5.7 (arabica) Linux 2.4 (eirene) Misc. update: release_docs/RELEASE will be updated soon.
* [svn-r8593] Purpose:Binh-Minh Ribler2004-05-271-7/+5
| | | | | | | | | | | | | | | | | | Add more C++ wrapper and documentation - incrementally check-in Description Added another overloaded constructor to StrType. Added doxygen documentation to H5IdComponent.cpp. Corrected some comments. This is an incremental check-in to preserve the code, corresponding tests will follow in a few weeks. Platforms: SunOS 5.7 (arabica) Linux 2.4 (eirene) Misc. update:
* [svn-r8588] Purpose:Binh-Minh Ribler2004-05-271-0/+13
| | | | | | | | | | | | | | | | | | | Add C++ wrappers - incrementally check-in Description Added wrapper for these C APIs: H5Rcreate H5Rget_obj_type H5Rget_region This is an incremental check-in to preserve the code, corresponding tests will follow in a few weeks. Platforms: Linux 2.4 (eirene) I'm checking the code out and test on arabica too. Misc. update:
* [svn-r8587] Purpose:Binh-Minh Ribler2004-05-261-0/+6
| | | | | | | | | | | | | | | Add C++ wrappers - incrementally check-in Description Added wrapper for these C APIs: H5Dget_offset H5Dget_space_status Platforms: SunOS 5.7 (arabica) Linux 2.4 (eirene) Misc. update:
* [svn-r6990] Purpose:Binh-Minh Ribler2003-06-071-1/+3
| | | | | | | | | | | | | | | | | | | | | | | | Bug fix and minor code enhancement Description: Missing methods to read/write C++ String for an attribute and a dataset. Solution: Added overloaded functions read and write to H5::Attribute and H5::DataSet. Also, added another constructor StrType so the need to separately set the length of the string type can be eliminated. It's minor but convenient. Made some minor changes to make error messages more readable. Platforms: SunOS 5.7 (arabica) Linux 2.4 (eirene) IRIX 6.5.11 (modi4) HPUX 11.00 (kelgia)
* [svn-r6236] Purpose: CopyrightBinh-Minh Ribler2003-01-071-0/+14
| | | | | | | | | Description: Added copyright notice to C++ API files, including *.h, *.cpp, and Makefile.in Platforms: Linux 6.2 (eirene)
* [svn-r5932] MuQun Yang2002-09-201-1/+1
| | | | | | | | | Purpose: use H5_DLLCPP to replacer __DLLCPP__ for c++ interfaces. Description: Solution: Platforms tested: linux 2.2.18smp, IRIX64, solaris 2.7, windows 2000
* [svn-r5427] Purpose:Binh-Minh Ribler2002-05-161-3/+7
| | | | | | | | | | | | | | | | | | New Feature - per library change Description: Added new member function DataSet::fillMemBuf for the new C API H5Dfill. Quincey's description of H5Dfill is as followed: Added new H5Dfill() routine to fill the elements in a selection for a memory buffer with a fill value. This is a user API wrapper around some internal routines which were needed for the fill-value modifications from Raymond as well as Pedro's code for reducing the size of a chunked dataset. Platforms: SunOS 5.7 (arabica) Linux 6.2 (eirene)
* [svn-r4977] Binh-Minh Ribler2002-02-161-1/+1
| | | | | | | | | | | | | | | | | | | | | | | Purpose: Adding support for dll Description: Added __DLLCPP__ to all public classes and templates. Added #include "H5Include.h" to H5RefCounter.cpp because of the use of DLLCPP in .h file and it needs the following chain: H5Include.h/hdf5.h/H5public.h/H5api_adpt.h Added #pragma warning(disable: 4251) to H5Exception.h to eliminate this warning on private data members of type 'string.' This occurs because 'string' is not yet instantiated at compilation time; however, since the class is exported, the warning is harmless. Changed this member function's parameter to be passed as reference. from: void CompType::insertMember( const string name,... to: void CompType::insertMember( const string& name,... Platforms tested: Linux 6.2 (eirene) Windows 2000
* [svn-r3540] Purpose:Binh-Minh Ribler2001-03-021-1/+1
| | | | | | | | | | | | | | | | | | | | Feasibility improvement Description: - Some member functions in class Exception can be called without an Exception instance exits, but because they are not static, they cannot. - Many exception throwings don't provide any information to callers. Solution: - Add 'static' to several member functions in class Exception. - Added <class name::function name> to some exceptions thrown in H5File.cpp and H5FcreatProp.cpp. I'm trying this for users' comments. More information may be added later and to all exceptions. - Changed the comment line for emacs editor to: // C++ informative line for the emacs editor: -*- C++ -*- because... I'd rather not say that the code "may look like C" :-) Platforms tested: Linux (gcc version egcs-2.91.66)
* [svn-r3534] Purpose:Bill Wendling2001-03-021-1/+1
| | | | | | | | | Bug Fix Description: Added comments to the top of C++ files to indicate that it's a C++ file and not a C source code file. Also added a macro which makes emacs automagically enter c++-mode. (Recommended by Frank Schimmel fschimme@monsoon.CAPS.ou.edu)
* [svn-r3199] Binh-Minh Ribler2000-12-231-7/+9
| | | | | | | | | | | | | | | | | | Purpose: bug fix Description: I found a couple of places where virtual destructors were missing and could cause small memory leaks. Also, some destructors were not virtual when they should be. Solution: - added virtual destructors, which also free dynamically allocated memory - added virtual to several destructors - also, fixed several typos Platforms tested: Solaris 2.7 (arabica)
* [svn-r2897] Purpose:Binh-Minh Ribler2000-11-141-0/+67
C++ API for 1.3.x branch Description: The *.C and *.h files named different than those in 1.2.x. They are in the form: 'H5' + classname, or just classname if the classname is already prefixed with 'H5' to avoid ambiguity in documentation context. This version has several hidden bugs fixed and an improvement on the reference counting approach. The classes and their inheritance structure are listed below: --------------------------------------- H5Library Exception RefCounter IdComponent H5File DataSpace H5Object Group AbstractDs DataSet Attribute DataType PredType EnumType CompType AtomType StrType IntType FloatType PropList FileCreatPropList FileAccPropList DSetCreatPropList DSetMemXferPropList --------------------------------------- IdComponent uses RefCounter to keep track of opened objects so proper termination of HDF5 objects can be maintained. Each class has a .h file containing the class declaration and a .C file containing its definition. In addition to the classes files, the following files do not have class information: - H5Cpp.h: header file to be included in user's application - H5Idtemplates.h: contains a template function used by several classes - H5Classes.h: contains forward class declarations - H5CommonFG.*: contains common code used by classes H5File and Group - H5Include.h: contains the hdf5.h header file and the #undef RCSID to work around the problem: multiple defined RcsId - H5Alltypes.h: simply serves as a container to hold the header files of all datatypes to simplify the header file inclusion Platforms: Solaris (arabica) and Linux
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