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* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* Description:Binh-Minh Ribler2017-03-211-0/+1
| | | | | | | | | Fixed typos and missing items in function headers, that were revealed by Doxygen, and revised various comments. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Description:Binh-Minh Ribler2017-03-171-2/+2
| | | | | | | Miscellaneous clean-up: format and comments Platforms tested: Linux/64 (jelly) Darwin (osx1010test)
* Description:Binh-Minh Ribler2017-03-031-149/+149
| | | | | | Only format changes: mostly tabs vs. spaces Platforms tested: Linux/64 (jelly) - very minor
* Purpose: Add new wrappersBinh-Minh Ribler2016-12-281-7/+5
| | | | | | | | | | | | | | Description: Added wrappers H5Location::exists() for H5Lexists. Added wrapper H5Object::objVersion() to return the header version of an HDF5 object. Added new class LinkAccPropList to be used by H5Location::exists() Added new exception: ObjHeaderIException for H5Object::objVersion() Rearranged source files in Makefile.am Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Purpose: Improvement for HDFFV-10004Binh-Minh Ribler2016-12-191-34/+9
| | | | | | | | | | | | | | | | | | | | | Description: When adding wrappers for H5Lexists, a new class, LinkAccPropList, was added to the C++ API, triggered complicated circular dependencies. Thus, some improvement was made to resolve the problems. - Replaced existing functions openXxxType with individual type constructors + Added individual XxxType constructors to replace the existing functions openXxxType because it's rather awkward to use these functions. + Moved openXxxType from H5Location back to CommonFG + Put back CommonFG as a baseclass of Group for openXxxType functions. + This replacement should improve usability and prevent the problem of circular dependencies. - Removed overloaded constructor that takes an Attribute when there is already one that takes H5Location because Attribute inherits from H5Location now. Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test) Linux/64 (platypus)
* Description:Binh-Minh Ribler2016-10-191-4/+0
| | | | | | | | | | | | Removed obsolet macros from C++ API: H5_NO_NAMESPACE, H5_NO_STD, __cplusplus Leave OLD_HEADER_FILENAME because iostream.h might still be in use, until further checking is done. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test) Jelly
* Description:Binh-Minh Ribler2016-10-121-3/+0
| | | | | | | | Fixed typo that caused daily test failed when --enable-deprecated-symbols is used. Also, removed a commented-out function. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) with --enable-deprecated-symbols
* Purpose: Updated documentationBinh-Minh Ribler2016-09-271-23/+7
| | | | | | | | | Description: Revised class brief description and other comments for up-to-date info. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Purpose: Fix bug HDFFR-9920 cont.Binh-Minh Ribler2016-09-211-4/+130
| | | | | | | | | | | | | Description: Adding user's test revealed a flaw in the fix. Moved CommonFG's functions in Group to H5Location, so that they could be called by objects that can be used to specify a location Also, rearranged many "#include" header files to resolve conflicts. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r30311] Purpose: Fix bug HDFFR-9920 cont.Binh-Minh Ribler2016-08-221-37/+6
| | | | | | | | | | | | | | | | | | | | | | | | | | trunk: Description: Continued rearranging the classes to model the relationship of HDF5 objects more accurately. The changes included: - in the baseclass list of Attribute, changed "public IdComponent" to "public H5Location", because location sometime can be specified with attribute - moved H5A wrappers in H5Location to H5Object because H5A functions can't be called on attribute id - removed the stubs Attribute::iterateAttrs and Attribute::renameAttr - removed Attribute::getFileName and Attribute::flush, because H5Location has them - result of the modified partial class diagram, regarding Attribute IdComponent | H5Location AbstractDs / \ / H5Object Attribute Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r28047] Purpose: Fix memory leaksBinh-Minh Ribler2015-10-131-3/+0
| | | | | | | | | | | | | Description: - Implemented the friend function void f_PropList_setId(PropList* plist, hid_t new_id) to work around the same problem described in trunk r26655, for the API DataSet::getCreatePlist() - Cleaned up some comments and obsolete functions Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r26655] Purpose: Fixed HDFFV-7947Binh-Minh Ribler2015-03-301-0/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | Description: When copy constructor or constructor that takes an existing id is invoked, the C ref counter stays the same but there is an extra C++ object which later is destroyed and may cause the HDF5 id to be closed prematurely. The C++ library needs to increment the ref counter in these situations, so that the C library will not close the id when it is still being referenced. However, the incrementing of ref count left some objects opened at the end of the program, perhaps, due to compiler's optimization on cons/destructors. The constructor, that takes an existing id, needs to increment the counter but it seems that the matching destructor wasn't invoked. The workaround is to have a function for each class that has "id" that only sets the id and not increment the ref count for the library to use in these situations. These functions are "friend" and not public. The friend functions are: void f_Attribute_setId(Attribute *, hid_t) void f_DataSet_setId(DataSet *, hid_t) void f_DataSpace_setId(DataSpace *, hid_t) void f_DataType_setId(DataType *, hid_t) Platforms tested: Linux/64 (platypus) Linux/32 2.6 (jam gnu and Intel 15.0) SunOS 5.11 (emu)
* [svn-r26462] Description:Binh-Minh Ribler2015-03-161-1/+1
| | | | | | Fixed typo that caused failure on Windows. Platforms tested: Linux/32 2.6 (jam)
* [svn-r26457] Purpose: Fix warnings HDFFV-8658Binh-Minh Ribler2015-03-151-1/+9
| | | | | | | | | | | | | | | | | | | | | | | | Description: The following two constructors of classes: AbstractDs, IdComponent, H5Location, and H5Object are no longer appropriate after the data member "id" had been moved from IdComponent to the sub-classes. The copy constructors are noop and will be generated by the compilers if needed so they can be removed in 1.8.15 without effecting applications. The other constructors will be removed from 1.10 release, and then from 1.8 if their removal does not raise any problems in at least two 1.10 releases. <Classname>(const hid_t h5_id); <Classname>(const <Classname>& original); Deprecation warnings are added to each of these classes. The other classes are changed to call the default constructor instead of one of the constructors above. Platforms tested: Linux/64 (platypus) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24994] Purpose: Removed some warningsBinh-Minh Ribler2014-04-091-3/+3
| | | | | | | | | Description: Turned on warnings and removed some of those. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24901] Description:Binh-Minh Ribler2014-03-261-2/+2
| | | | | | | | | Fixed mismatched function prototype/definition that caused daily test failure on emu/production/HDF5TestExpress=1. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24865] Description:Binh-Minh Ribler2014-03-211-2/+3
| | | | | | | | | | | - Added another overload for char* argument: ssize_t getComment(const char* name, const size_t buf_size, char* comment) - Changed default value to 0 for the other two getComment methods - Added HDmemset to after every char string allocation to clear the buffer Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) Linux/64 2.6 (platypus)/PGI compilers
* [svn-r24291] Description:Binh-Minh Ribler2013-10-151-11/+15
| | | | | | | | | - Added a lot of documentation to classes for Reference Manual. - Fixed some format inconsistencies Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) Linux/64 2.6 (koala)/PGI compilers
* [svn-r24189] Purpose: Fixed bug HDFFV-1060Binh-Minh Ribler2013-09-231-3/+3
| | | | | | | | Description: Changed header guards from single underscore to double underscore. Platforms tested: Linux/32 2.6 (jam) - very minor Linux/64 2.6 (koala)/PGI compilers
* [svn-r24188] Purpose: Fixed bug introduced in r24163Binh-Minh Ribler2013-09-231-18/+35
| | | | | | | | | | | | | Description: - The failure in daily test was caused by missing initialization of member "id" in a few constructors. This is now fixed. - Added two overloaded H5Location::setComment - Improved some error reporting in H5Location - Improved error reporting in tests Platforms tested: Linux/32 2.6 (jam) SunOS 5.11 (emu) Linux/64 2.6 (koala)/PGI compilers
* [svn-r24178] Back out the changes that cause daily test to fail r24163Binh-Minh Ribler2013-09-201-33/+18
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* [svn-r24163] Purpose: More on HDFFV-7520 and HDFFV-533Binh-Minh Ribler2013-09-191-18/+33
| | | | | | | | | | | | Description: - Improved the changes in revisions r22836 and r23438, mainly on the wrappers of reference, dereference, get region, and set/getcomment. - Added more tests. Platforms tested: Linux/32 2.6 (jam) SunOS 5.11 (emu) Linux/ppc64 (ostrich)
* [svn-r24162] backing out a commit that includes wrong filesBinh-Minh Ribler2013-09-191-33/+18
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* [svn-r24161] Purpose: More on HDFFV-7520 and HDFFV-533Binh-Minh Ribler2013-09-191-18/+33
| | | | | | | | | | | Description: - Completed the changes in revisions r22836 and r23438 with improvement on wrappers such as reference, dereference, get region, and set/getcomment. - Added more tests. Platforms tested: Linux/32 2.6 (jam) SunOS 5.11 (emu) Linux/ppc64 (ostrich)
* [svn-r24143] Description:Binh-Minh Ribler2013-09-161-1/+1
| | | | | | | Fixed comments, documentation, and mis-matched DOXYGEN_SHOULD_SKIP_THIS pairs. Platforms tested: Linux/32 2.6 (jam) Regenerated and verified generated documentation.
* [svn-r23438] Purpose: Fix bug HDFFV-7520Binh-Minh Ribler2013-03-231-3/+7
| | | | | | | | | Description: Added wrappers for H5Aexists. Platforms Tested: Linux/32 2.6 (jam) Linux/64 2.6 (koala) Linux/ppc64 (ostrich)
* [svn-r22836] Purpose: Fix bug HDFFV-533 and add other missing functionsBinh-Minh Ribler2012-09-271-0/+146
Description: In this bug, H5File doesn't have the ability to create attribute. The following changes will provide that functionality and several others that were also missing: - Added an abstract class H5Location in between IdComponent and H5Object. - New class structure of IdComponent, H5Location, H5Object, H5File IdComponent | H5Location / \ H5Object H5File - Wrappers in H5Object were moved to H5Location because the related C functions take either file, group, dataset, or named datatype ID. - Added wrapper for H5Rget_obj_type2 - Added tests for file attributes and H5Rget_obj_type2 wrapper Platforms tested: Linux/32 2.6 (jam) Linux/64 2.6 (koala) SunOS 5.10 (linew)
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