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* TRILABS-19 Initial conversion of include_directories to targetsAllen Byrne2018-04-171-0/+2
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* HDFFV-10444 fix soversion numbers for librariesAllen Byrne2018-04-101-2/+2
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* Fixed memory leakBinh-Minh Ribler2018-03-151-0/+4
| | | | | | | | Description: Added LinkCreatPropList to initH5cpp to cleaning up resource at exit. Platforms tested: Linux/64 (jelly) Linux/ppc64 (ostrich)
* Merge branch 'develop' of ↵Binh-Minh Ribler2018-03-131-1/+1
|\ | | | | | | https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_cpp3 into develop
| * Merge pull request #936 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp3:develop ↵Binh-Minh Ribler2018-03-1227-432/+778
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop Modified 43158f3bb352f374c31556a5d0dc463a09e0b32e and additional wrappers. * commit 'b638bbd74b79f935a43aa6a804492e035ec315f6': Code improvement Description: - Removed memory leaks caused by accidentally invoking p_get_member_type - Added the call to test_lcpl, missed previously Platforms tested: Linux/64 (jelly) Linux/ppc64 (ostrich) Darwin (osx1010test) Updated RELEASE.txt Description: - Wrappers for H5Lcreate_soft, H5Lcreate_hard, H5Lcopy, H5Lmove, H5Ldelete, and H5Lget_info - Class LinkCreatPropList - Fixed typo in source file Platforms tested: Linux/64 (jelly) Updated for H5LcreatProp.[h,cpp] Updated MANIFEST for H5LcreatProp.[h,cpp] HDFFV-10149 continued Description: - Moved the new wrappers committed on Mar 9: 43158f3bb352f374c31556a5d0dc463a09e0b32e to H5Location and renamed some of them for overloading. This is because the loc_id in the C APIs can be file, group, dataset, named datatype, and attribute. Previous implementation was wrong following some inaccurate C API reference manual.
| * \ Merge pull request #932 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2018-03-121-1/+1
| |\ \ | | | | | | | | | | | | | | | | | | | | | | | | * commit '75db73efc514aff2af63618cc7be357fc4e77cb6': Add release note Remove obsolete comments Change CMake min to 3.10
| | * | Change CMake min to 3.10Allen Byrne2018-03-091-1/+1
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* | | | Fixed documentationBinh-Minh Ribler2018-03-1351-145/+75
| |_|/ |/| | | | | | | | | | | | | | | | | | | | Description: - Updated the description of copy constructor for clarification. - Removed unnecessary comments. Platforms tested: Linux/64 (jelly)
* | | Code improvementBinh-Minh Ribler2018-03-121-19/+19
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Removed memory leaks caused by accidentally invoking p_get_member_type - Added the call to test_lcpl, missed previously Platforms tested: Linux/64 (jelly) Linux/ppc64 (ostrich) Darwin (osx1010test)
* | | Updated RELEASE.txtBinh-Minh Ribler2018-03-121-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Wrappers for H5Lcreate_soft, H5Lcreate_hard, H5Lcopy, H5Lmove, H5Ldelete, and H5Lget_info - Class LinkCreatPropList - Fixed typo in source file Platforms tested: Linux/64 (jelly)
* | | Updated for H5LcreatProp.[h,cpp]Binh-Minh Ribler2018-03-121-0/+2
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* | | HDFFV-10149 continuedBinh-Minh Ribler2018-03-1226-413/+757
|/ / | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Moved the new wrappers committed on Mar 9: 43158f3bb352f374c31556a5d0dc463a09e0b32e to H5Location and renamed some of them for overloading. This is because the loc_id in the C APIs can be file, group, dataset, named datatype, and attribute. Previous implementation was wrong following some inaccurate C API reference manual. - Only the following wrappers are modified or added: + H5Lcreate_soft: changed name from newLink to link // Creates a soft link from link_name to target_name. void link(const char *target_name, const char *link_name,...) void link(const H5std_string& target_name,...) + H5Lcreate_hard: changed name from newLink to link // Creates a hard link from new_name to curr_name. void link(const char *curr_name, const Group& new_loc,...) void link(const H5std_string& curr_name, const Group& new_loc,...) // Creates a hard link from new_name to curr_name in same location. void link(const char *curr_name, const hid_t same_loc,...) void link(const H5std_string& curr_name, const hid_t same_loc,...) + H5Ldelete: modified existing functions to add 2nd argument // Removes the specified link from this location. void unlink(const char *link_name, const LinkAccPropList& lapl = LinkAccPropList::DEFAULT) void unlink(const H5std_string& link_name, const LinkAccPropList& lapl = LinkAccPropList::DEFAULT) - copyLink and moveLink were only moved from Group to H5Location, no change - Added class LinkCreatPropList - Added overloaded functions H5Location::createGroup to take a link creation property list Group createGroup(const char* name, const LinkCreatPropList& lcpl) Group createGroup(const H5std_string& name, const LinkCreatPropList& lcpl) - Added wrapper for H5Lget_info() to H5Location H5L_info_t getLinkInfo(const H5std_string& link_name,...) Platforms tested: Linux/64 (jelly) Linux/ppc64 (ostrich) Darwin (osx1010test)
* | Merge pull request #833 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp3:develop ↵Binh-Minh Ribler2018-03-1020-175/+465
|\ \ | |/ |/| | | | | | | | | | | | | | | | | to develop Update for new support website. * commit '801191b4c374adc462345f2c068f1cfc6f4adf97': Upated cpp doc. Added C++ wrappers - HDFFV-10149 Description: Added the following wrappers to class H5::Group: + H5Lcreate_soft: // Creates a soft link from link_name to target_name. void newLink(const char *target_name, const char *link_name,...) void newLink(const H5std_string& target_name,...) Update for new support website Description: - Replaced external links with text including the C API name - Removed links of copyright at the bottom of each page - Removed logo at top - Removed document name and version number Platforms tested: Linux/32 2.6 (jam) - only documentation
| * Upated cpp doc.Binh-Minh Ribler2018-03-101-1/+1
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| * Added C++ wrappers - HDFFV-10149Binh-Minh Ribler2018-03-103-20/+363
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Added the following wrappers to class H5::Group: + H5Lcreate_soft: // Creates a soft link from link_name to target_name. void newLink(const char *target_name, const char *link_name,...) void newLink(const H5std_string& target_name,...) + H5Lcreate_hard: // Creates a hard link from new_name to curr_name. void newLink(const char *curr_name, const Group& new_loc,...) void newLink(const H5std_string& curr_name, const Group& new_loc,...) // Creates a hard link from new_name to curr_name in same location. void newLink(const char *curr_name, const hid_t same_loc,...) void newLink(const H5std_string& curr_name, const hid_t same_loc,...) + H5Lcopy: // Copy an object from a group of file to another. void copyLink(const char *src_name, const Group& dst,...) void copyLink(const H5std_string& src_name, const Group& dst,...) // Copy an object from a group of file to the same location. void copyLink(const char *src_name, const char *dst_name,...) void copyLink(const H5std_string& src_name,...) + H5Lmove: // Rename an object in a group or file to a new location. void moveLink(const char* src_name, const Group& dst,...) void moveLink(const H5std_string& src_name, const Group& dst,...) // Rename an object in a group or file to the same location. void moveLink(const char* src_name, const char* dst_name,...) void moveLink(const H5std_string& src_name,...) Platforms tested: Linux/64 (jelly) Linux/ppc64 (ostrich) Darwin (osx1010test)
| * Update for new support websiteBinh-Minh Ribler2017-12-2118-156/+103
| | | | | | | | | | | | | | | | | | | | Description: - Replaced external links with text including the C API name - Removed links of copyright at the bottom of each page - Removed logo at top - Removed document name and version number Platforms tested: Linux/32 2.6 (jam) - only documentation
* | HDFFV-4359 Add HL C++ and fix install parametersAllen Byrne2018-03-081-2/+2
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* | HDFFV-4359 Add C,HL,CXX filesAllen Byrne2018-03-081-0/+47
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* | Inc CMake min, Add new tests, rework test CMake filesAllen Byrne2018-02-271-1/+1
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* | Snapshot version 1.11 release 2hdftest2018-01-051-1/+1
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* | Snapshot version 1.11 release 1hdftest2018-01-051-1/+1
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* | Add library INTERFACE and MPI to toolsAllen Byrne2017-12-281-2/+2
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* Various code cleanupBinh-Minh Ribler2017-12-045-15/+49
| | | | | | | | | | | Description: - Replaced H5Location::exists with H5Location::nameExists and marked H5Location::exists as deprecated. - Miscellaneous test cleanup for consistency. Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* Updated doxygen config fileBinh-Minh Ribler2017-10-031-1/+2
| | | | | | | Description: Added C2Cppfunction_map.mht to HTML_EXTRA_FILES. Verified that the file is copied to cpplus_RM after running doxygen on cpp_doc_config.
* Fixed typos for document file.Binh-Minh Ribler2017-09-251-1/+1
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* Added documentation fileBinh-Minh Ribler2017-09-172-0/+35296
| | | | | | | Description: Added a single page html file, C2Cppfunction_map.mht, that shows the current mapping of C APIs to C++ member functions. This page can be reached from the main page of the C++ reference manual.
* Miscellaneous code cleanupBinh-Minh Ribler2017-09-1532-90/+51
| | | | | | | | | | | | | Description: - Removed two inadvertently-added Group constructors in the header file. There was no implementation. - Removed deprecated H5Location and H5Object constructors that take an existing ID. - Miscellaneous improvements in comments, including updating URLs. Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* New overloaded functions and testsBinh-Minh Ribler2017-09-1217-55/+117
| | | | | | | | | | | | | | | Description: - Added VarLenType::VarLenType(const DataType& base_type) - Marked VarLenType::VarLenType(const DataType* base_type) deprecated - Added a static wrapper for H5Tdetect_class for PredType static bool DataType::detectClass(const PredType& pred_type, ...) - Removed the deprecated function Exception::printError() from code - Miscellaneous improvements in comments - Added test functions test_detect_type_class() and test_vltype() Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* Adding variable initializationBinh-Minh Ribler2017-09-078-12/+12
| | | | | | | Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Adding new C++ wrappersBinh-Minh Ribler2017-09-0417-12/+309
| | | | | | | | | | | | | | | | | | | | | | | | | Description: Added wrappers for H5Tencode to class DataType and H5Tdecode to classes DataType and its subclasses. // Creates a binary object description of this datatype. void DataType::encode() // Returns the decoded type from the binary object description. virtual DataType* DataType::decode() const; virtual DataType* ArrayType::decode() const; virtual DataType* CompType::decode() const; virtual DataType* DataType::decode() const; virtual DataType* EnumType::decode() const; virtual DataType* FloatType::decode() const; virtual DataType* IntType::decode() const; virtual DataType* StrType::decode() const; virtual DataType* VarLenType::decode() const; Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Miscellaneous improvements (cont.)Binh-Minh Ribler2017-08-252-0/+21
| | | | | | | | | Description: Put back H5Location::getNumObjs and marked as deprecated in favor of Group::getNumObjs. Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test)
* Miscellaneous improvementsBinh-Minh Ribler2017-08-247-69/+71
| | | | | | | | | | | Description: Moved H5Location::getNumObjs to Group::getNumObjs (i.e., H5Gget_info) Switched reinterpret_cast to static_cast in H5Object::iterateAttrs Miscellaneous cleanup Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* * Reverted removal of H5I_REFERENCE to avoid breaking binaryDana Robinson2017-07-032-0/+20
| | | | | | compatibility. * Added a quick H5I_REFERENCE smoke check to test_misc19() in tmisc.c.
* Purged the unused H5I_REFERENCE from the library.Dana Robinson2017-07-011-2/+0
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* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-2566-396/+264
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* Description:Binh-Minh Ribler2017-03-2117-80/+116
| | | | | | | | | Fixed typos and missing items in function headers, that were revealed by Doxygen, and revised various comments. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Extend h5vers to update version strings in java files and h5repacklrknox2017-03-201-1/+1
| | | | | | | | version test expected output file. Update version on develop branch to 1.11.0. Please enter the commit message for your changes. Lines starting
* Purpose: Add new C++ wrappersBinh-Minh Ribler2017-03-193-31/+43
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Because H5Pset_file_space and H5Pget_file_space are deprecated, changed to make wrappers for the new functions instead: H5Ps/get_file_space_strategy H5Ps/get_file_space_page_size New wrappers in FileCreatPropList: // Sets the strategy and the threshold value that the library will // will employ in managing file space. void setFileSpaceStrategy(H5F_fspace_strategy_t strategy, hbool_t persist, hsize_t threshold) const; // Returns the strategy that the library uses in managing file space. void getFileSpaceStrategy(H5F_fspace_strategy_t& strategy, hbool_t& persist, hsize_t& threshold) const; // Sets the file space page size for paged aggregation. void setFileSpacePagesize(hsize_t fsp_psize) const; // Returns the threshold value that the library uses in tracking free // space sections. hsize_t getFileSpacePagesize() const; Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Description:Binh-Minh Ribler2017-03-171-4/+4
| | | | | | Fixed typos. Platforms tested: Linux/64 (jelly)
* Description:Binh-Minh Ribler2017-03-172-2/+66
| | | | | | | | | Deprecating versions of PropList::setProperty that have arguments that miss "const" Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1010test)
* Description:Binh-Minh Ribler2017-03-1735-149/+182
| | | | | | | Miscellaneous clean-up: format and comments Platforms tested: Linux/64 (jelly) Darwin (osx1010test)
* Merge pull request #334 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp2:develop ↵Binh-Minh Ribler2017-03-1611-8/+219
|\ | | | | | | | | | | | | to develop * commit '98090fe3b08a0ff85ae9bc93218a14017a6f37fe': Purpose: Add new C++ wrappers Description: Added wrappers for H5Iis_valid, H5Ps/get_nlinks, H5Tget_create_plist, H5Oopen, H5Oclose and H5Pset_virtual
| * Purpose: Add new C++ wrappersBinh-Minh Ribler2017-03-1411-8/+219
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Added wrappers for H5Iis_valid, H5Ps/get_nlinks, H5Tget_create_plist, H5Oopen, H5Oclose and H5Pset_virtual // Checks if the given ID is valid. static bool isValid(hid_t an_id); // Sets the number of soft or user-defined links that can be // traversed before a failure occurs. void setNumLinks(size_t nlinks) const; // Gets the number of soft or user-defined link traversals allowed size_t getNumLinks() const; // Returns a copy of the creation property list of a datatype. PropList getCreatePlist() const; // Opens an object within a group or a file, i.e., root group. hid_t getObjId(const char* name,...); hid_t getObjId(const H5std_string& name,...); // Closes an object opened by getObjId(). void closeObjId(hid_t obj_id) const; // Maps elements of a virtual dataset to elements of the source dataset. void setVirtual(const DataSpace& vspace, const char *src_fname,...); void setVirtual(const DataSpace& vspace, const H5std_string src_fname,...); Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* | Final merge of page buffering branch to developQuincey Koziol2017-03-143-1/+5
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* Description:Binh-Minh Ribler2017-03-0361-9034/+9024
| | | | | | Only format changes: mostly tabs vs. spaces Platforms tested: Linux/64 (jelly) - very minor
* Purpose: Add new C++ wrappersBinh-Minh Ribler2017-02-235-3/+97
| | | | | | | | | | | | | | | | | | | Description: Added wrappers for H5Fget_info2, H5Inmembers, and H5Itype_exists // Gets general information about this file. void getFileInfo(H5F_info2_t& file_info) const; // Returns the number of members in a type. static hsize_t getNumMembers(H5I_type_t type); // Determines if an element type exists. static bool typeExists(H5I_type_t type); Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* Description:Binh-Minh Ribler2017-02-161-2/+10
| | | | | | Fixed and added function comments. Platform tested: Jam (very minor)
* Description:Binh-Minh Ribler2017-02-151-1/+1
| | | | | | Fixed small typos Platform tested: Jam (very minor)
* Purpose: Add new C++ wrappersBinh-Minh Ribler2017-02-152-0/+74
| | | | | | | | | | | | | | | | | | | | | Description: Added wrappers for H5Pset_file_space and H5Pget_file_space // Sets the strategy and the threshold value that the library will // will employ in managing file space. void setFileSpace(H5F_file_space_type_t strategy, hsize_t threshold) const; // Returns the strategy that the library uses in managing file space. H5F_file_space_type_t getFileSpaceStrategy() const; // Returns the threshold value that the library uses in tracking free // space sections. hsize_t getFileSpaceThreshold() const; Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* HDFFV-9875 enable static pdb and cleanup exportsAllen Byrne2017-02-031-1/+1
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