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* Description:Binh-Minh Ribler2017-03-0361-9034/+9024
| | | | | | Only format changes: mostly tabs vs. spaces Platforms tested: Linux/64 (jelly) - very minor
* Purpose: Add new C++ wrappersBinh-Minh Ribler2017-02-235-3/+97
| | | | | | | | | | | | | | | | | | | Description: Added wrappers for H5Fget_info2, H5Inmembers, and H5Itype_exists // Gets general information about this file. void getFileInfo(H5F_info2_t& file_info) const; // Returns the number of members in a type. static hsize_t getNumMembers(H5I_type_t type); // Determines if an element type exists. static bool typeExists(H5I_type_t type); Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* Description:Binh-Minh Ribler2017-02-161-2/+10
| | | | | | Fixed and added function comments. Platform tested: Jam (very minor)
* Description:Binh-Minh Ribler2017-02-151-1/+1
| | | | | | Fixed small typos Platform tested: Jam (very minor)
* Purpose: Add new C++ wrappersBinh-Minh Ribler2017-02-152-0/+74
| | | | | | | | | | | | | | | | | | | | | Description: Added wrappers for H5Pset_file_space and H5Pget_file_space // Sets the strategy and the threshold value that the library will // will employ in managing file space. void setFileSpace(H5F_file_space_type_t strategy, hsize_t threshold) const; // Returns the strategy that the library uses in managing file space. H5F_file_space_type_t getFileSpaceStrategy() const; // Returns the threshold value that the library uses in tracking free // space sections. hsize_t getFileSpaceThreshold() const; Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* HDFFV-9875 enable static pdb and cleanup exportsAllen Byrne2017-02-031-1/+1
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* HDFFV-9875 Fix target exports and add static tools pdb filesAllen Byrne2017-02-021-0/+1
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* Update cmake min version and cmake command conventionAllen Byrne2017-01-101-4/+4
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* Description:Binh-Minh Ribler2017-01-041-0/+2
| | | | Added H5LaccProp.[h,cpp].
* Removed commented section left in by mistake.Binh-Minh Ribler2017-01-031-8/+0
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* Purpose: Add new wrappersBinh-Minh Ribler2016-12-2829-44/+286
| | | | | | | | | | | | | | Description: Added wrappers H5Location::exists() for H5Lexists. Added wrapper H5Object::objVersion() to return the header version of an HDF5 object. Added new class LinkAccPropList to be used by H5Location::exists() Added new exception: ObjHeaderIException for H5Object::objVersion() Rearranged source files in Makefile.am Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Description:Binh-Minh Ribler2016-12-2319-65/+9
| | | | | | Removed commented out code and fixed miscellaneous typos. Platforms tested: Linux/32 2.6 (jam) (very minor)
* Purpose: Improvement for HDFFV-10004Binh-Minh Ribler2016-12-1936-410/+909
| | | | | | | | | | | | | | | | | | | | | Description: When adding wrappers for H5Lexists, a new class, LinkAccPropList, was added to the C++ API, triggered complicated circular dependencies. Thus, some improvement was made to resolve the problems. - Replaced existing functions openXxxType with individual type constructors + Added individual XxxType constructors to replace the existing functions openXxxType because it's rather awkward to use these functions. + Moved openXxxType from H5Location back to CommonFG + Put back CommonFG as a baseclass of Group for openXxxType functions. + This replacement should improve usability and prevent the problem of circular dependencies. - Removed overloaded constructor that takes an Attribute when there is already one that takes H5Location because Attribute inherits from H5Location now. Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test) Linux/64 (platypus)
* Snapshot version 1.9 release 235hdftest2016-12-161-1/+1
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* Code style and warning cleanups, from revise_chunks branch.Quincey Koziol2016-11-062-2/+0
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* Description:Binh-Minh Ribler2016-10-261-0/+2
| | | | | | | | | | | - In the test for HDFFV-9758, a pragma pack(1) caused failure on Emu because Sparc cannot access misaligned data. Changed it to pack() to do the default alignment. - Added DOXYGEN_SHOULD_SKIP_THIS blocks to private elements to prevent warnings from doxygen. Platforms tested: SunOS 5.11 (emu) Linux/32 2.6 (jam)
* Description:Binh-Minh Ribler2016-10-1957-257/+20
| | | | | | | | | | | | Removed obsolet macros from C++ API: H5_NO_NAMESPACE, H5_NO_STD, __cplusplus Leave OLD_HEADER_FILENAME because iostream.h might still be in use, until further checking is done. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test) Jelly
* Description:Binh-Minh Ribler2016-10-142-6/+3
| | | | | | | | Fixed typo that caused daily test failed when --enable-deprecated-symbols is used. Also, removed a commented-out function. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) with --enable-deprecated-symbols
* Description:Binh-Minh Ribler2016-10-142-2/+0
| | | | | | Removed commented out lines. Platform tested Jam (only comments)
* Purpose: Updated documentationBinh-Minh Ribler2016-10-1424-75/+115
| | | | | | | | | Description: Revised class brief description and other comments for up-to-date info. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Purpose: Fix bug HDFFR-9920 cont.Binh-Minh Ribler2016-10-1426-1466/+1494
| | | | | | | | | | | | | Description: Adding user's test revealed a flaw in the fix. Moved CommonFG's functions in Group to H5Location, so that they could be called by objects that can be used to specify a location Also, rearranged many "#include" header files to resolve conflicts. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Add support for namespace and add tools to binaries configAllen Byrne2016-10-141-0/+1
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* Snapshot release: increment version.lrknox2016-10-011-1/+1
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* [svn-r30311] Purpose: Fix bug HDFFR-9920 cont.Binh-Minh Ribler2016-08-2224-411/+374
| | | | | | | | | | | | | | | | | | | | | | | | | | trunk: Description: Continued rearranging the classes to model the relationship of HDF5 objects more accurately. The changes included: - in the baseclass list of Attribute, changed "public IdComponent" to "public H5Location", because location sometime can be specified with attribute - moved H5A wrappers in H5Location to H5Object because H5A functions can't be called on attribute id - removed the stubs Attribute::iterateAttrs and Attribute::renameAttr - removed Attribute::getFileName and Attribute::flush, because H5Location has them - result of the modified partial class diagram, regarding Attribute IdComponent | H5Location AbstractDs / \ / H5Object Attribute Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r30309] Purpose: Fix bug HDFFR-9920Binh-Minh Ribler2016-08-2022-1405/+1475
| | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Rearranged the classes to model the relationship of HDF5 objects more accurately. The changes included: - moved CommonFG's methods to Group - removed CommonFG from Group's base class list - removed CommonFG from H5File's base class list and changed "public H5Location" to "public Group" in the base class list - CommonFG became unused - result of the modified partial class diagram: IdComponent | H5Location / H5Object | / / \ DadaType Group DataSet | H5File Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r30279] Purpose: Code improvement (HDFFR-9725)Binh-Minh Ribler2016-08-1213-101/+78
| | | | | | | | | Description: Removed deprecated functions in previous releases due to missing const. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r30272] Purpose: Code improvementBinh-Minh Ribler2016-08-099-82/+37
| | | | | | | | | | | Description: - Added "const" to arguments that should be const - Added "const" to const functions, i.e., function that don't change the objects they operate on. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r30058] Correct typo in compile scripts that causes dropping of ↵Larry Knox2016-06-081-1/+1
| | | | | | filename in -o outfile. Addresses HDFFV-9530 and HDFFV-9938.
* [svn-r29862] Convert source list names from *_SRCS to *_SOURCES.Allen Byrne2016-05-041-3/+3
| | | | Add/convert most tools to use new HDF5_TOOLS_DIR instead of HDF5_TOOLS_SRC_DIR CMake VAR.
* [svn-r29786] Purpose: Add new wrapperBinh-Minh Ribler2016-04-253-16/+25
| | | | | | | | | Description: Added wrapper for H5Tset_nbit: void DSetCreatPropList::setNbit() const. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29782] Purpose: Code improvementBinh-Minh Ribler2016-04-244-110/+55
| | | | | | | | | | | | | Description: - Removed ArrayType::rank and ArrayType::dimensions and modified the methods ArrayType::getArrayNDims and ArrayType::getArrayDims to always call the C functions to get the rank and dimensions. - Overloaded ArrayType::getArrayNDims and ArrayType::getArrayDims to provide const version and marked the non-const version deprecated. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29766] Description:Binh-Minh Ribler2016-04-221-1/+1
| | | | | | | - Changed object in catch statements to reference (left over from previous) Platforms tested: Linux/32 2.6 (jam) (very minor)
* [svn-r29759] Purpose: Code improvementsBinh-Minh Ribler2016-04-2215-75/+64
| | | | | | | | | | | | Description: - Changed object in catch statements to reference - Replaced old-style casts or reinterpret_cast with static_cast - Removed unused name H5Library::need_cleanup - Removed Exception::printError from documentation Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29379] Add individual LT_VERS_* variables for wrapper libraries: c++, ↵Larry Knox2016-03-091-1/+1
| | | | | | | | | | | | | | | | fortran, java, hl, hl/c++, hl/fortran to so that the shared object version numbers can be incremented independently. Disabled auto-increment of shared object version numbers by h5vers. Files modified: config/lt_vers.am java/src/jni/Makefile.am hl/src/Makefile.am hl/c++/src/Makefile.am hl/fortran/src/Makefile.am c++/src/Makefile.am bin/h5vers fortran/src/Makefile.am
* [svn-r29362] Description:Binh-Minh Ribler2016-03-091-1/+0
| | | | | | Removed another left-over commented-out line. Platforms tested: Linux/64 (platypus) - very minor
* [svn-r29361] Purpose: CorrectionBinh-Minh Ribler2016-03-091-2/+2
| | | | | | | | | | Description: Replaced static_cast with reinterpret_cast for "void *". Removed some commented-out old code. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29340] Purpose: Code cleanupBinh-Minh Ribler2016-03-0810-54/+55
| | | | | | | | | | | | | | | Description: - Removed many warnings: warning: use of old-style cast warning: enumeration value ‘H5D_VIRTUAL’ not handled in switch warning: comparison between signed and unsigned There are others of the same warnings and they will be taken care of in the next release. - Made some code reuse between overloads Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29322] Purpose: Remove obsoletesBinh-Minh Ribler2016-03-078-93/+126
| | | | | | | | | | Description: Removed obsolete functions from the documentation. They are still in the code, however, until the next two releases, just in case. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29306] Purpose: Add functionBinh-Minh Ribler2016-03-0712-30/+56
| | | | | | | | | | Description: Added member function ArrayType::operator= because ArrayType has pointer data members. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29226] HDFFV-9552: merge in java code.Allen Byrne2016-02-291-1/+1
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* [svn-r29004] Description:Binh-Minh Ribler2016-01-281-2/+2
| | | | | | Removed extra ';'. Platform tested jam (very minor)
* [svn-r28905] Purpose: Fix user reported problemBinh-Minh Ribler2016-01-154-52/+88
| | | | | | | | | | | | | | | | Description: User Adam Rosenberger reported a failure when using the member function AbstractDs::getArrayType(). This problem was caused by missing initialization of the ArrayType's members in some cases. Solution: - Added ArrayType::setArrayInfo() to retrieve rank and dimensions of an array and store them in memory for easy access. - Re-factored a few functions to use the new function. - We'll give him 1.8.16 patch Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r28730] Snapshot version 1.9 release 233HDF Tester2015-12-281-1/+1
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* [svn-r28047] Purpose: Fix memory leaksBinh-Minh Ribler2015-10-137-39/+36
| | | | | | | | | | | | | Description: - Implemented the friend function void f_PropList_setId(PropList* plist, hid_t new_id) to work around the same problem described in trunk r26655, for the API DataSet::getCreatePlist() - Cleaned up some comments and obsolete functions Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r28027] Purpose: Fix memory leaksBinh-Minh Ribler2015-10-1115-125/+134
| | | | | | | | | | | | | Description: - Removed H5Library::instance because it is unnecessary. All H5Library's methods are static. This, in turn, removed the memory leaks by H5Library::instance not being deleted. - Added ObjCreatPropList::deleteConstants to atexist() list - Cleaned up comments and format inconsistencies with 1.8 Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r27968] Modified version number to 1.9.233 before creating a tar ball ↵Elena Pourmal2015-10-061-1/+1
| | | | for DLS.
* [svn-r27966] DescriptionBinh-Minh Ribler2015-10-061-0/+2
| | | | Added H5OcreatProp.h and H5OcreatProp.cpp.
* [svn-r27961] Purpose: Partial fix of issues HDFFV-9169 and HDFFV-9167Binh-Minh Ribler2015-10-0624-13/+331
| | | | | | | | | | | | | | | | | | | | | | Description: Added wrappers for H5P[s/g]et_attr_phase_change and H5P[s/g]et_attr_creation_order // Sets attribute storage phase change thresholds. void setAttrPhaseChange(unsigned max_compact = 8, unsigned min_dense = 6) // Gets attribute storage phase change thresholds. void getAttrPhaseChange(unsigned& max_compact, unsigned& min_dense) // Sets tracking and indexing of attribute creation order. void setAttrCrtOrder(unsigned crt_order_flags) // Gets tracking and indexing settings for attribute creation order. unsigned getAttrCrtOrder() Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r27945] Purpose: Fix HDFFV-9529Binh-Minh Ribler2015-10-0422-430/+1896
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Merged from hdf5_CppAPI_Constants r27942: ------ Description: - Added H5dont_atexit() to getPredType and all the getConstant's to prevent the C library from terminating before the C++ library cleanup. - More cleanup and added more comments r27923: ------ - Updated more comments and moved some things around for consistency - Removed check for "new" failure, exceptions would be thrown r27922: ------ Description: Added function headers and more comments for clarity. r27917: ------ Description: The C++ library has several types of global constants from different classes, such as PropList, PredType, DataSpace, etc... Previously, these global constants were declared statically and the C++ library used a constant, called PredType::AtExit, to detect when all the global contants are destroyed then close the C library (H5close). This method relied on the order of the constants being created and destroyed and that PredType constants be the last to be destroyed. In September 2015, it was recognized that the order in which the global constants were created and destroyed was actually undefined, thus can be different between different compilers. This resulted in failure when compilers destroy PredType constants before others because when PredType::AtExit was destroyed, the C library was closed, so when the constants of other classes such as PropList or DataSpace were being deleted, the C library would not be available. Solution: The static approach is changed to dynamic. In order to avoid an impact on existing applications, the static global constants are changed to constant references to the dynamically allocated objects. A detailed explanation of the new method and a description of the changes are in a Design Notes at the end of the file H5PredType.cpp. New functions added to support the new methods are listed below. class H5Library: // Returns a singleton H5Library to initialize the global // constants, invoked in IdComponent default constructor static H5Library* getInstance(); // public // Registers cleanup and terminating functions with atexit(), // called in IdComponent default constructor static void initH5cpp(void); // public // Calls H5close to terminate the library, registered with // atexit(), as the last thing to be done. static void termH5cpp(void); // public class PredType: // Creates the constants static void makePredTypes(); // private // Calls makePredTypes to create the constants and returns // the dummy constant PREDTYPE_CONST; static PredType* getPredTypes(); // private class DataSpace: // Creates the constant static DataSpace* getConstant(); // private class PropList: // Creates the constant static PropList* getConstant(); // private class DSetCreatPropList: // Creates the constant static DSetCreatPropList* getConstant(); // private class DSetMemXferPropList: // Creates the constant static DSetMemXferPropList* getConstant(); // private class FileCreatPropList: // Creates the constant static FileCreatPropList* getConstant(); // private class FileAccPropList: // Creates the constant static FileAccPropList* getConstant(); // private This function is added to PredType, DataSpace, PropList, and the four subclasses of PropList: // Deletes the constant static void deleteConstants(); // public Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r27943] Purpose: Fix HDFFV-7947 (cont.)Binh-Minh Ribler2015-10-032-4/+4
| | | | | | | | | | | | | | | Description: In the friend functions that setId, changed the direct assignment of id to using p_setId() so that the previous id can be closed first to avoid memory leaks. This change was tested and confirmed by user Jorj on Forum when his application stopped running out of memory. Currently, the C++ library doesn't have a way to test this. A function such as H5Inmembers for library ids would be helpful. Platforms tested: Linux/32 2.6 (jam) SunOS 5.11 (emu) Darwin (osx1010test)
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