| Commit message (Collapse) | Author | Age | Files | Lines |
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* close #195. (#196)
* Update HDF5PluginMacros.cmake
* Update HDF5PluginMacros.cmake
* Modify temporary rpath for testing in java example scripts. (#230)
* Fix undefined left shifting of negative numbers (#338)
Undefined Bahavior Sanitizer errored here about left shifting negative numbers.
* Update license url (#332)
* Modify temporary rpath for testing in java example scripts.
* Update URL in source file Copyright headers for web copy of COPYING
file - src and test directories.
* Applied clang-tidy readability-non-const-parameter warning fixes auto… (#429)
* Automatically applied clang-tidy readability-avoid-const-params-in-decls fixes
Removes useless const declarations.
* Fixed most readability-non-const-parameter warnings
These changes were made automatically by clang-tidy, but I manually reverted the changes related to the H5Z_func_t signature.
* Reformat source with clang v10.0.1.
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
* Added C++11 override keyword where appropriate (#433)
Added H5_OVERRIDE macro for compatibility with both C++11 and older.
* Various clang tidy warning fixes (#448)
* Fixed clang-tidy bugprone-reserved-identifier warnings
* Fixed clang-tidy bugprone-assert-side-effect warnings
* Fixed clang-tidy bugprone-copy-constructor-init warning
* Fixed clang-tidy readability-redundant-preprocessor warning
For error_test.c the removed code was already dead, because it was in the else of an `#if H5_USE_16_API` block.
Based on H5Location.h, I think p_get_ref_obj_type was meant to be in `#ifndef DOXYGEN_SHOULD_SKIP_THIS` and an `#endif` was missing. Similarly, in the header, getObjTypeByIdx is only in H5_NO_DEPRECATED_SYMBOLS, not DOXYGEN_SHOULD_SKIP_THIS.
* Fixed clang-tidy readability-redundant-string-init warnings
* Fixed some clang-tidy performance-type-promotion-in-math-fn warnings
* Fixed clang-tidy performance-unnecessary-value-param warnings
* Reformat source with clang v10.0.1.
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
* Removed checks/workarounds for pre-C++89 compatibility (#449)
After 30+ years, just assume that the following exist:
- extension-less includes
- namespaces
- std::
- static_cast
- bool
* Fixed all clang-tidy bugprone-suspicious-string-compare warnings (#451)
* Fixed all clang-tidy bugprone-suspicious-string-compare warnings
This change was generated entirely by clang-tidy itself.
* Reformat code with clang v10.0.1.
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
* Fix clang-tidy suspicious string compare in H5A.c missed in merge.
Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org>
Co-authored-by: Sean McBride <sean@rogue-research.com>
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* HDFFV-10865 - merge from dev, HDFArray perf fix.
* Remove duplicate setting
* Whitespace changes after clang format
* Undo version 11 clang format changes
* Merge CMake changes from develop
* test testing script merge from develop
* Update supported platforms
* PR#3 merge from develop
* Merge gcc 10 diagnostics option from develop
* Merge #318 OSX changes from develop
* Merge small changes from develop
* Minor non-space formatting changes
* #386 copyright corrections for java folder
* Merges from develop
#358 patches from vtk
#361 fix header guard spelling
* Merge updates
#358 patches from vtk
#361 fix header guard spelling
* format fix
* Fix missing underscore and make H5public.h closer to dev
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* close #195. (#196)
* Update HDF5PluginMacros.cmake
* Update HDF5PluginMacros.cmake
* Modify temporary rpath for testing in java example scripts. (#230)
* Fix undefined left shifting of negative numbers (#338)
Undefined Bahavior Sanitizer errored here about left shifting negative numbers.
* Update license url (#332)
* Modify temporary rpath for testing in java example scripts.
* Update URL in source file Copyright headers for web copy of COPYING
file - src and test directories.
* Update license url part2 (#333)
* Modify temporary rpath for testing in java example scripts.
* Update URL in source file Copyright headers for web copy of COPYING
file - files not in src or test.
* Update URL in source file Copyright headers for web.
Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org>
Co-authored-by: Sean McBride <sean@rogue-research.com>
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and replace it with new url for COPYING file.
Fix 2 lines in java error test expected output file where messages
include line numbers changed by reducing the copyright header by 2
lines.
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Only format changes: mostly tabs vs. spaces
Platforms tested:
Linux/64 (jelly) - very minor
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Removed obsolet macros from C++ API:
H5_NO_NAMESPACE, H5_NO_STD, __cplusplus
Leave OLD_HEADER_FILENAME because iostream.h might still be in use,
until further checking is done.
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (platypus)
Darwin (osx1010test)
Jelly
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Description:
Adding user's test revealed a flaw in the fix.
Moved CommonFG's functions in Group to H5Location, so that they
could be called by objects that can be used to specify a location
Also, rearranged many "#include" header files to resolve conflicts.
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (platypus)
Darwin (osx1010test)
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Description:
- Used FP_EPSILON in comparing float values to verify read data
- Casted C macro to fix mismatched types in verify_val calls
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (platypus)
Darwin (osx1010test)
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Description:
User Adam Rosenberger reported a failure when using the member function
AbstractDs::getArrayType(). This problem was caused by missing
initialization of the ArrayType's members in some cases.
Solution:
- Added ArrayType::setArrayInfo() to retrieve rank and dimensions of
an array and store them in memory for easy access.
- Re-factored a few functions to use the new function.
- We'll give him 1.8.16 patch
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (platypus)
Darwin (osx1010test)
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Description:
Turned on warnings and removed some of those.
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
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- Added wrappers to H5Object for H5Iget_name() to get object's name
ssize_t getObjName(char *obj_name, size_t buf_size = 0) const;
ssize_t getObjName(H5std_string& obj_name, size_t len = 0) const;
H5std_string getObjName() const;
- Added tests tobject.cpp
- Added to various cleanup_* functions in tests to remove generated files
- Added an overload H5I_type_t getHDFObjType() to get object's type
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu) with gmake
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Description:
Added transform property list functions
// Constructor creates a dataset transform property list.
DSetMemXferPropList(const char* expression);
// Sets data transform expression.
void setDataTransform(const char* expression) const;
void setDataTransform(const H5std_string& expression) const;
// Gets data transform expression.
ssize_t getDataTransform(char* exp, size_t buf_size=0) const;
H5std_string getDataTransform() const;
Added test file tdspl.cpp.
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
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Description:
Applied patch from user Jason Newton. JIRA issue HDFFV-8623, patch
9, improve c++ compatibility with exceptions. All additions of "throw()"
are included. Exception::what() is not added because it is not necessary.
It was suggested for the name, which follows stdlib.
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
Linux/64 2.6 (koala)/PGI compilers
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Description:
- The failure in daily test was caused by missing initialization of member
"id" in a few constructors. This is now fixed.
- Added two overloaded H5Location::setComment
- Improved some error reporting in H5Location
- Improved error reporting in tests
Platforms tested:
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
Linux/64 2.6 (koala)/PGI compilers
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Added missing overloaded function getObjTypeByIdx to return type name
as a char*.
Platforms tested:
Linux/32 2.6 (jam)
FreeBSD/64 6.3 (liberty)
SunOS 5.10 (linew)
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Removed header file testhdf5.h from C++ tests to eliminate a non-standard
problem on OpenVMS. It wasn't essential.
Platforms tested:
Linux/32 2.6 (jam)
FreeBSD/64 6.3 (liberty)
Ray agreed to test on OpenVMS.
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Description:
Fixed CommonFG::getComment and CommonFG::getLinkval to provide
default values for buffer size to improve usability.
Added test file tlinks.cpp, which only contains test for getLinkval
and will expand when C++ wrappers for H5L functions are implemented.
Platforms tested:
Linux/32 2.6 (jam)
FreeBSD/64 6.3 (liberty)
SunOS 5.10 (linew)
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Description:
Added extern "C" to cleanup functions as well, forgot last time.
Cleaned up/Added comments to some of the newly added tests.
Platforms tested
AIX 5.1 (copper)
Linux 2.6 (kagiso)
SunOS 5.8 64-bit (sol)
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Description:
VMS revealed a problem in calling C++ test functions from C AddTest.
Solution:
Per Quincey's suggestion, added
#ifdef __cplusplus
extern "C"
#endif
to the called C++ functions.
Platforms tested
AIX 5.1 (copper)
Linux 2.6 (kagiso)
On pending: waiting for Elena to test on VMS when she comes back.
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copyright notice.
Tested platform:
Kagiso only since it is only a comment block change. If it works in one
machine, it should work in all, I hope. Still need to check the parallel
build on copper.
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Description:
- Added a brief test for DSetCreatPropList::setSzip. More through tests
will be added later.
- Moved check_values from dsets.cpp into h5cpputil.cpp for sharing
with other tests.
Platforms tested
AIX 5.1 (copper)
SunOS 5.8 64-bit (sol)
Linux 2.6 (kagiso)
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Description:
Added
* tests for some generic datatype operations
* tests for compound datatype operations
These tests are checked in now to make sure they're safe! They can
use some more comments and minor cleanups. Will do very soon.
Fixed few minor typos.
Platforms tested
AIX 5.1 (copper)
SunOS 5.8 64-bit (sol)
HPUX 11.00 (kelgia)
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Description:
Changed to alias string instead of std, i.e. H5std_string instead
of H5std, because the old way wasn't working when std didn't exist.
Platforms tested:
Linux 2.4 (heping)
SunOS 5.8 64-bit (sol)
HPUX 11.00 (kelgia) - this was the problematic platform but I wasn't
able to test before.
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Description:
Added alias H5_std so either the global or std namespace can be
used, depending on H5_NO_STD.
Platforms tested:
Linux 2.4 (heping)
SunOS 5.8 64-bit (sol)
AIX 5.1 (copper)
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Code cleanup
Description:
Tweak copyright on C++ source files to reduce whining by copyright checking
script.
Platforms tested:
FreeBSD 4.11 (sleipnir) w/C++
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Code cleanup
Description:
Trim trailing whitespace, which is making 'diff'ing the two branches
difficult.
Solution:
Ran this script in each directory:
foreach f (*.[ch] *.cpp)
sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f
end
Platforms tested:
FreeBSD 4.11 (sleipnir)
Too minor to require h5committest
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Description:
Added an overloaded function for the template function verify_val.
Updated various comments/headers.
Platforms tested:
Linux 2.4 (heping)
AIX 5.1 (copper)
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Description:
Fixed typo in using namespace; it was mistakenly opening the namespace.
Platforms tested:
Linux 2.4 (heping)
Very minor, and tested 3 platforms for 1.6 branch
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Description:
+ C tests' macro VERIFY casts values to 'long' for all cases. Since
there are no operator<< for 'long long' or int64 in VS C++ ostream,
I casted the hsize_t/hssize_t values passed to verify_val to 'long'
as well. If problems arise later, this may have to be specificly
handled with an overload - th5s.cpp
+ Added the use of InvalidActionException for when an action
should cause an exception but didn't - th5s.cpp and tfile.cpp
+ Small changes to improve failure reports
Platforms tested:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
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Description:
+ replaced "goto error" with throw exceptions
+ properly cleanup dynamically allocated memory in failure cases,
for in some cases, the execution continues on after the failures
were reported.
+ added test utility class InvalidActionException for when an action
should cause an exception but doesn't.
Platforms tested:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Note that there was an error due to the missing symbol H5E_LEN. To
be able to test my changes, I temporarily replaced H5E_LEN in c++/src
with a constant as in the C tests, before the problem can be fixed.
This value doesn't effect the C++ tests at all, at this time.
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Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-)
Description:
Generally speaking, this is the "signed->unsigned" change to selections.
However, in the process of merging code back, things got stickier and stickier
until I ended up doing a big "sync the two branches up" operation. So... I
brought back all the "infrastructure" fixes from the development branch to the
release branch (which I think were actually making some improvement in
performance) as well as fixed several bugs which had been fixed in one branch,
but not the other.
I've also tagged the repository before making this checkin with the label
"before_signed_unsigned_changes".
Platforms tested:
FreeBSD 4.10 (sleipnir) w/parallel & fphdf5
FreeBSD 4.10 (sleipnir) w/threadsafe
FreeBSD 4.10 (sleipnir) w/backward compatibility
Solaris 2.7 (arabica) w/"purify options"
Solaris 2.8 (sol) w/FORTRAN & C++
AIX 5.x (copper) w/parallel & FORTRAN
IRIX64 6.5 (modi4) w/FORTRAN
Linux 2.4 (heping) w/FORTRAN & C++
Misc. update:
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Description:
Replaced cout's with cerr's.
Replaced macro VERIFY with template function verify_val to
verify read data/info.
Cleanup various places in the tests to make them more consistent.
Platforms tested:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
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Purpose:
Code cleanup
Description:
Moved a utility function out so other tests can use the same
function and avoid code duplication. Future utility functions
can also benefit from this move.
Platforms tested:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
IRIX 6.5.11 (modi4)
HPUX 11.00 (kelgia)
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