| Commit message (Collapse) | Author | Age | Files | Lines |
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Tested: h5committest
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Tested: h5committest --PASSED--
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Tested: local linux with CMake
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* H5_ATTR_FORMAT(X,Y,Z) __attribute__((format(X, Y, Z)))
- Rename UNUSED attribute characterstic to H5_ATTR_UNUSED.
- Rename NORETURN attribute characterstic to H5_ATTR_NORETURN
tested with h5committest.
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--enable-fortran
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definitions
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redundant /usr/include and lib in fcompile and link flags checks, now that I have run reconfigure.
Also changed paths to h5cc, etc. in scripts to run installed examples from relative paths to absolute paths.
Tested with h5committest.
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Description:
- Put back the UNUSED parameters in dsets test because the change to remove
the warning last time caused failure in setting filter, in turn, caused
failure in the test with such obscure/unrelated errors!
- Added incRefCount() to other constructors that missed from last time.
Platforms tested:
Linux/64 (platypus)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
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Description:
Per user Jason Newton request, the following constructor is added:
H5File(hid_t existing_id);
Also, fixed H5File::openFile to close current file first before re-using
the object.
Platforms tested:
Linux/64 (platypus)
Linux/32 2.6 (jam gnu and Intel 15.0)
SunOS 5.11 (emu)
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Remove CXX_CONDITIONAL
remove unneeded/obsolete sections.
h5commtitest
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Description:
When copy constructor or constructor that takes an existing id is invoked,
the C ref counter stays the same but there is an extra C++ object which
later is destroyed and may cause the HDF5 id to be closed prematurely. The
C++ library needs to increment the ref counter in these situations, so that
the C library will not close the id when it is still being referenced.
However, the incrementing of ref count left some objects opened at the end
of the program, perhaps, due to compiler's optimization on cons/destructors. The constructor, that takes an existing id, needs to increment the counter
but it seems that the matching destructor wasn't invoked. The workaround
is to have a function for each class that has "id" that only sets the id
and not increment the ref count for the library to use in these situations.
These functions are "friend" and not public.
The friend functions are:
void f_Attribute_setId(Attribute *, hid_t)
void f_DataSet_setId(DataSet *, hid_t)
void f_DataSpace_setId(DataSpace *, hid_t)
void f_DataType_setId(DataType *, hid_t)
Platforms tested:
Linux/64 (platypus)
Linux/32 2.6 (jam gnu and Intel 15.0)
SunOS 5.11 (emu)
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Description:
Added wrappers for C functions H5P[s/g]et_libver_bounds and wrappers
for getting object header version
// Sets bounds on versions of library format to be used when creating
// or writing objects.
void setLibverBounds(H5F_libver_t libver_low, H5F_libver_t libver_high) const;
// Gets the current settings for the library version format bounds.
void getLibverBounds(H5F_libver_t& libver_low, H5F_libver_t& libver_high) const;
// Returns the object header version of an object in a file or group,
// given the object's name.
unsigned childObjVersion(const char* objname) const;
unsigned childObjVersion(const H5std_string& objname) const;
Platforms tested:
Linux/64 (platypus)
Linux/32 2.6
SunOS 5.11
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Description:
- Changed DataType::operator= to simply copy the id of rhs instead of
calling H5Tcopy because, when the operator= is invoked, a different
datatype id is created and it won't have the same characteristics as
rhs', specifically, if the rhs represents a named datatype, "this"
would still be a transient datatype.
- Added a DataType constructor that takes a PredType object, and this
constructor will cause H5Tcopy to generate another datatype id, from a
predefined datatype.
- Fixed various mistakes in tests.
Platforms tested:
Linux/64 (platypus)
Linux/32 2.6 (jam/gnu and jam/icc 15)
SunOS 5.11 (emu development/production)
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Tested: local linux
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Description:
Fixed many type conversion warnings and unused variables.
Platforms tested:
Linux/64 (platypus)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
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features/autotools_rework
branch.
Removed the configure option that allows selective disabling of individual
internal filters (fletcher32, shuffle, etc.).
This feature mucked up the code with a lot of #ifdefs, saved very little space,
and was not scalable to a general scheme for library size reduction. We've
decided to remove the feature while we investigate a more general scheme for
decreasing the library size.
Part of: HDFFV-9086
Tested on: h5committest
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make clean.
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HDFFV-9089, HDFFV-9091, HDFFV-9092, HDFFV-9094, HDFFV-9095
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autotools_rework branch:
- Remove Infering parallel compilers (C and Fortran) from configure.ac
- Remove restriction to build shared with parallel
- Cleanup parallel sections in configure.ac
- remove large file support checks
- MPE fixes.
tested with h5committest.
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Description:
Followed hints on the JIRA issue to remove several potential memory
leaks.
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
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Description:
H5F_ACC_CREAT was included in the C++ API while the C library doesn't
allow it yet. Possibly, in the future, but not now. In addition, the
two flags H5F_ACC_RDONLY and H5F_ACC_RDWR were missing from the
documentation, causing confusion that appending is not supported.
Solution:
- Removed H5F_ACC_CREAT from the function until the C library support it
- Added H5F_ACC_RDONLY and H5F_ACC_RDWR to the comments to update the
documentation
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
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MPI_File_set_size as they are supported by most MPI implementations.
- fix bug in t_mpi.c (HDFFV-8856)
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Tested: local linux
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back fix for removing rpaths from l
ib files. The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath co
nfigure option was invoked.
Added instead configure variable hardcode_into_lib=no. This removes rpath from lib files on Linux
and solaris machines.
Tested with h5committest on jam, koala, ostrich and platypus (cmake), and with configure option --disable-sharedlib-rpath on emu, platypus and quail.
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- Put back Exception::printError for backward compatibility
- Added static member function Exception::printErrorStack to print
error stack without an instance of Exception.
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
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Put back overloaded functions for backward compatibility:
- were replaced by better prototyped versions, such as Attribute::getName.
- were modified to add const to constant arguments.
Added notes for future removal in documentation.
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
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Description:
Turned on warnings and removed some of those.
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
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Description:
- Added wrappers to CommomFG for H5Oget_info_by_name() to get a child
object's type (requested by user)
H5O_type_t childObjType(const H5std_string& objname) const;
H5O_type_t childObjType(const char* objname) const;
H5O_type_t childObjType(hsize_t index, H5_index_t index_type=H5_INDEX_NAME, H5_iter_order_t order=H5_ITER_INC, const char* objname=".") const;
- Added tests to tobject.cpp
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
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Added c++/test/tobject.cpp
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- Added wrappers to H5Object for H5Iget_name() to get object's name
ssize_t getObjName(char *obj_name, size_t buf_size = 0) const;
ssize_t getObjName(H5std_string& obj_name, size_t len = 0) const;
H5std_string getObjName() const;
- Added tests tobject.cpp
- Added to various cleanup_* functions in tests to remove generated files
- Added an overload H5I_type_t getHDFObjType() to get object's type
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu) with gmake
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Remove WIN32 AND NOT CYGWIN if blocks - should be just WIN32
Tested: local linux CMake
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- Overloaded Atribute::getName to take a char* for the attribute name:
ssize_t Attribute::getName(char* attr_name, size_t buf_size)
- Switched the arguments in this function:
ssize_t getName(size_t buf_size, H5std_string& attr_name)
so it became:
ssize_t getName(H5std_string& attr_name, size_t buf_size)
The second argument is default to 0, and can be skipped.
- Removed this function:
H5std_string getName(size_t buf_size); it'll collide with the
first function when that function takes a NULL for the first
argument, and uses default value for the second argument.
- Added more tests
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
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instead of INCLUDES. Update automake to 1.14.1
h5committest
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Added proper deallocation/allocation to test.
Revised incorrect comments.
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
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Description:
Added transform property list functions
// Constructor creates a dataset transform property list.
DSetMemXferPropList(const char* expression);
// Sets data transform expression.
void setDataTransform(const char* expression) const;
void setDataTransform(const H5std_string& expression) const;
// Gets data transform expression.
ssize_t getDataTransform(char* exp, size_t buf_size=0) const;
H5std_string getDataTransform() const;
Added test file tdspl.cpp.
Platforms tested:
Linux/ppc64 (ostrich)
Linux/32 2.6 (jam)
SunOS 5.11 (emu)
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