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* | Merge pull request #943 in HDFFV/hdf5 from develop to hdf5_1_10Larry Knox2018-03-1351-145/+75
|\ \ | |/ | | | | | | | | | | | | | | | | | | | | | | * commit '9247388c3d14510341ea3f07847ce2cbb6e44a8e': Rework new tests into one macro Added a "won't fix" RELEASE.txt entry for HDFFV-10356. Fix CMake test names Fixed typo Add release note for HDFFFV-10397. Added a fix for HDFFV-10358. Fixed documentation Description: - Updated the description of copy constructor for clarification. - Removed unnecessary comments. Platforms tested: Linux/64 (jelly) Enhancement to the tool h5clear (HDFFV-10360) Fix for HDFFV-10209 VDS SWMR test failure Free the object header when there are chksum retries.
| * Merge branch 'develop' of ↵Binh-Minh Ribler2018-03-134-4/+4
| |\ | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_cpp3 into develop
| * | Fixed documentationBinh-Minh Ribler2018-03-1351-145/+75
| | | | | | | | | | | | | | | | | | | | | | | | Description: - Updated the description of copy constructor for clarification. - Removed unnecessary comments. Platforms tested: Linux/64 (jelly)
* | | Merge branch 'develop' into hdf5_1_10_mergeM. Scot Breitenfeld2018-03-1238-377/+1262
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| * | Merge pull request #936 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp3:develop ↵Binh-Minh Ribler2018-03-1228-441/+897
| |\ \ | | |/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop Modified 43158f3bb352f374c31556a5d0dc463a09e0b32e and additional wrappers. * commit 'b638bbd74b79f935a43aa6a804492e035ec315f6': Code improvement Description: - Removed memory leaks caused by accidentally invoking p_get_member_type - Added the call to test_lcpl, missed previously Platforms tested: Linux/64 (jelly) Linux/ppc64 (ostrich) Darwin (osx1010test) Updated RELEASE.txt Description: - Wrappers for H5Lcreate_soft, H5Lcreate_hard, H5Lcopy, H5Lmove, H5Ldelete, and H5Lget_info - Class LinkCreatPropList - Fixed typo in source file Platforms tested: Linux/64 (jelly) Updated for H5LcreatProp.[h,cpp] Updated MANIFEST for H5LcreatProp.[h,cpp] HDFFV-10149 continued Description: - Moved the new wrappers committed on Mar 9: 43158f3bb352f374c31556a5d0dc463a09e0b32e to H5Location and renamed some of them for overloading. This is because the loc_id in the C APIs can be file, group, dataset, named datatype, and attribute. Previous implementation was wrong following some inaccurate C API reference manual.
| | * Code improvementBinh-Minh Ribler2018-03-122-25/+26
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Removed memory leaks caused by accidentally invoking p_get_member_type - Added the call to test_lcpl, missed previously Platforms tested: Linux/64 (jelly) Linux/ppc64 (ostrich) Darwin (osx1010test)
| | * Updated RELEASE.txtBinh-Minh Ribler2018-03-121-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Wrappers for H5Lcreate_soft, H5Lcreate_hard, H5Lcopy, H5Lmove, H5Ldelete, and H5Lget_info - Class LinkCreatPropList - Fixed typo in source file Platforms tested: Linux/64 (jelly)
| | * Updated for H5LcreatProp.[h,cpp]Binh-Minh Ribler2018-03-121-0/+2
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| | * HDFFV-10149 continuedBinh-Minh Ribler2018-03-1227-422/+875
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Moved the new wrappers committed on Mar 9: 43158f3bb352f374c31556a5d0dc463a09e0b32e to H5Location and renamed some of them for overloading. This is because the loc_id in the C APIs can be file, group, dataset, named datatype, and attribute. Previous implementation was wrong following some inaccurate C API reference manual. - Only the following wrappers are modified or added: + H5Lcreate_soft: changed name from newLink to link // Creates a soft link from link_name to target_name. void link(const char *target_name, const char *link_name,...) void link(const H5std_string& target_name,...) + H5Lcreate_hard: changed name from newLink to link // Creates a hard link from new_name to curr_name. void link(const char *curr_name, const Group& new_loc,...) void link(const H5std_string& curr_name, const Group& new_loc,...) // Creates a hard link from new_name to curr_name in same location. void link(const char *curr_name, const hid_t same_loc,...) void link(const H5std_string& curr_name, const hid_t same_loc,...) + H5Ldelete: modified existing functions to add 2nd argument // Removes the specified link from this location. void unlink(const char *link_name, const LinkAccPropList& lapl = LinkAccPropList::DEFAULT) void unlink(const H5std_string& link_name, const LinkAccPropList& lapl = LinkAccPropList::DEFAULT) - copyLink and moveLink were only moved from Group to H5Location, no change - Added class LinkCreatPropList - Added overloaded functions H5Location::createGroup to take a link creation property list Group createGroup(const char* name, const LinkCreatPropList& lcpl) Group createGroup(const H5std_string& name, const LinkCreatPropList& lcpl) - Added wrapper for H5Lget_info() to H5Location H5L_info_t getLinkInfo(const H5std_string& link_name,...) Platforms tested: Linux/64 (jelly) Linux/ppc64 (ostrich) Darwin (osx1010test)
| * | Merge pull request #932 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2018-03-124-4/+4
| |\ \ | | |/ | |/| | | | | | | | | | | | | * commit '75db73efc514aff2af63618cc7be357fc4e77cb6': Add release note Remove obsolete comments Change CMake min to 3.10
| | * Change CMake min to 3.10Allen Byrne2018-03-094-4/+4
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| * | Merge pull request #833 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp3:develop ↵Binh-Minh Ribler2018-03-1021-301/+730
| |\ \ | | |/ | |/| | | | | | | | | | | | | | | | | | | | | | | | | to develop Update for new support website. * commit '801191b4c374adc462345f2c068f1cfc6f4adf97': Upated cpp doc. Added C++ wrappers - HDFFV-10149 Description: Added the following wrappers to class H5::Group: + H5Lcreate_soft: // Creates a soft link from link_name to target_name. void newLink(const char *target_name, const char *link_name,...) void newLink(const H5std_string& target_name,...) Update for new support website Description: - Replaced external links with text including the C API name - Removed links of copyright at the bottom of each page - Removed logo at top - Removed document name and version number Platforms tested: Linux/32 2.6 (jam) - only documentation
| | * Upated cpp doc.Binh-Minh Ribler2018-03-101-1/+1
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| | * Added C++ wrappers - HDFFV-10149Binh-Minh Ribler2018-03-104-146/+628
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Added the following wrappers to class H5::Group: + H5Lcreate_soft: // Creates a soft link from link_name to target_name. void newLink(const char *target_name, const char *link_name,...) void newLink(const H5std_string& target_name,...) + H5Lcreate_hard: // Creates a hard link from new_name to curr_name. void newLink(const char *curr_name, const Group& new_loc,...) void newLink(const H5std_string& curr_name, const Group& new_loc,...) // Creates a hard link from new_name to curr_name in same location. void newLink(const char *curr_name, const hid_t same_loc,...) void newLink(const H5std_string& curr_name, const hid_t same_loc,...) + H5Lcopy: // Copy an object from a group of file to another. void copyLink(const char *src_name, const Group& dst,...) void copyLink(const H5std_string& src_name, const Group& dst,...) // Copy an object from a group of file to the same location. void copyLink(const char *src_name, const char *dst_name,...) void copyLink(const H5std_string& src_name,...) + H5Lmove: // Rename an object in a group or file to a new location. void moveLink(const char* src_name, const Group& dst,...) void moveLink(const H5std_string& src_name, const Group& dst,...) // Rename an object in a group or file to the same location. void moveLink(const char* src_name, const char* dst_name,...) void moveLink(const H5std_string& src_name,...) Platforms tested: Linux/64 (jelly) Linux/ppc64 (ostrich) Darwin (osx1010test)
| | * Update for new support websiteBinh-Minh Ribler2017-12-2118-156/+103
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Replaced external links with text including the C API name - Removed links of copyright at the bottom of each page - Removed logo at top - Removed document name and version number Platforms tested: Linux/32 2.6 (jam) - only documentation
* | | Merge branch 'develop' into hdf5_1_10_mergeM. Scot Breitenfeld2018-03-091-0/+47
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| * | HDFFV-4359 Add HL C++ and fix install parametersAllen Byrne2018-03-081-2/+2
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| * | HDFFV-4359 Add C,HL,CXX filesAllen Byrne2018-03-081-0/+47
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| * | Inc CMake min, Add new tests, rework test CMake filesAllen Byrne2018-02-275-6/+6
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| * | HDFFV-10398 use the simpler add_subdirectory signatureAllen Byrne2018-01-301-3/+3
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| * | HDFFV-10385 rework java namesAllen Byrne2018-01-172-3/+0
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| * | Snapshot version 1.11 release 2hdftest2018-01-051-1/+1
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| * | Snapshot version 1.11 release 1hdftest2018-01-051-1/+1
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| * | Add library INTERFACE and MPI to toolsAllen Byrne2017-12-281-2/+2
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* | Incr CMake min, add missing test, rework test CMake scriptAllen Byrne2018-02-275-6/+6
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* | Snapshot version 1.10 release 2 (snap9)hdftest2018-02-111-1/+1
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* | HDFFV-10398 merge from develop improve CMake codeAllen Byrne2018-01-301-3/+3
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* | HDFFV-10385,10392,10393 merge from developAllen Byrne2018-01-222-3/+0
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* | Snapshot version 1.10 release 2 (snap8)hdftest2018-01-081-1/+1
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* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)hdftest2018-01-061-2/+2
|\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'efa2a470c9d8cf2d584f6b22f5b80cd6687887d0': (36 commits) Merge fix HDFFV-9724 1_10 branch has a different number HDFFV-9724 Merge vds prefix from develop reverted changes from sync Snapshot version 1.11 release 1 Fix valgrind issues HDFFV-9724 init var to null HDFFV-9724 add valgrind ENV Fix memory leak due to addition of FORMAT check loop HDFFV-9724 prefix of 0 length should be null value HDFFV-9724 Corrected files and verified tests Add library INTERFACE and MPI to tools Increase maximum number of retries for h5watch tests. Revert "Merge pull request #826 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop" Fix library interface commands, add missing JNI Add HD prefix HDFFV-9724 Remove VDS file cache functionality Removed incorrect MPI text Par example needs to link with mpi libs Because of MPI requirements in library ALWAYS add include path ...
| * | Fix library interface commands, add missing JNIAllen Byrne2017-12-211-2/+2
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* | | Snapshot version 1.10 release 2 (snap7)hdftest2017-12-311-1/+1
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* | | Snapshot version 1.10 release 2 (snap6)hdftest2017-12-241-1/+1
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* | Snapshot version 1.10 release 2 (snap5)hdftest2017-12-171-1/+1
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* | Merge branch 'develop' into hdf5_1_10M. Scot Breitenfeld2017-12-1220-544/+522
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| * Fixed typo.Binh-Minh Ribler2017-12-041-1/+1
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| * Various code cleanupBinh-Minh Ribler2017-12-0420-543/+521
| | | | | | | | | | | | | | | | | | | | | | Description: - Replaced H5Location::exists with H5Location::nameExists and marked H5Location::exists as deprecated. - Miscellaneous test cleanup for consistency. Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* | Snapshot version 1.10 release 2 (snap4)hdftest2017-12-111-1/+1
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* | Snapshot version 1.10 release 2 (snap3)hdftest2017-11-201-1/+1
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* | Merge branch 'develop' into hdf5_1_10M. Scot Breitenfeld2017-10-2669-329/+36448
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| * Updated doxygen config fileBinh-Minh Ribler2017-10-031-1/+2
| | | | | | | | | | | | | | Description: Added C2Cppfunction_map.mht to HTML_EXTRA_FILES. Verified that the file is copied to cpplus_RM after running doxygen on cpp_doc_config.
| * Fixed typos for document file.Binh-Minh Ribler2017-09-251-1/+1
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| * Added documentation fileBinh-Minh Ribler2017-09-172-0/+35296
| | | | | | | | | | | | | | Description: Added a single page html file, C2Cppfunction_map.mht, that shows the current mapping of C APIs to C++ member functions. This page can be reached from the main page of the C++ reference manual.
| * Miscellaneous code cleanupBinh-Minh Ribler2017-09-1532-90/+51
| | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Removed two inadvertently-added Group constructors in the header file. There was no implementation. - Removed deprecated H5Location and H5Object constructors that take an existing ID. - Miscellaneous improvements in comments, including updating URLs. Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
| * Fixed incorrect callsBinh-Minh Ribler2017-09-1416-52/+52
| | | | | | | | | | | | | | | | Description: Replaced the calls to the deprecated function printError with printErrorStack in examples. Platforms tested: Linux/32 2.6 (jam)
| * New overloaded functions and testsBinh-Minh Ribler2017-09-1219-109/+416
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Added VarLenType::VarLenType(const DataType& base_type) - Marked VarLenType::VarLenType(const DataType* base_type) deprecated - Added a static wrapper for H5Tdetect_class for PredType static bool DataType::detectClass(const PredType& pred_type, ...) - Removed the deprecated function Exception::printError() from code - Miscellaneous improvements in comments - Added test functions test_detect_type_class() and test_vltype() Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
| * Adding variable initializationBinh-Minh Ribler2017-09-078-12/+12
| | | | | | | | | | | | | | Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
| * Adding new C++ wrappersBinh-Minh Ribler2017-09-0418-30/+543
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Added wrappers for H5Tencode to class DataType and H5Tdecode to classes DataType and its subclasses. // Creates a binary object description of this datatype. void DataType::encode() // Returns the decoded type from the binary object description. virtual DataType* DataType::decode() const; virtual DataType* ArrayType::decode() const; virtual DataType* CompType::decode() const; virtual DataType* DataType::decode() const; virtual DataType* EnumType::decode() const; virtual DataType* FloatType::decode() const; virtual DataType* IntType::decode() const; virtual DataType* StrType::decode() const; virtual DataType* VarLenType::decode() const; Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
| * Miscellaneous improvements (cont.)Binh-Minh Ribler2017-08-252-0/+21
| | | | | | | | | | | | | | | | | | Description: Put back H5Location::getNumObjs and marked as deprecated in favor of Group::getNumObjs. Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test)
| * Miscellaneous improvementsBinh-Minh Ribler2017-08-247-69/+71
| | | | | | | | | | | | | | | | | | | | | | Description: Moved H5Location::getNumObjs to Group::getNumObjs (i.e., H5Gget_info) Switched reinterpret_cast to static_cast in H5Object::iterateAttrs Miscellaneous cleanup Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
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