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* [svn-r25181] Snapshot version 1.9 release 180HDF Tester2014-05-111-1/+1
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* [svn-r25158] Snapshot version 1.9 release 179HDF Tester2014-05-041-1/+1
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* [svn-r25126] Snapshot version 1.9 release 178HDF Tester2014-04-271-1/+1
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* [svn-r25125] Description:Binh-Minh Ribler2014-04-261-1/+1
| | | | | | | | Made printError() virtual as the original; missed it from the previous fix. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r25117] Removed LT_ADD_LIBHDF5_DEPENDENCY configure conditional to roll ↵Larry Knox2014-04-255-13/+4
| | | | | | | | | | | back fix for removing rpaths from l ib files. The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath co nfigure option was invoked. Added instead configure variable hardcode_into_lib=no. This removes rpath from lib files on Linux and solaris machines. Tested with h5committest on jam, koala, ostrich and platypus (cmake), and with configure option --disable-sharedlib-rpath on emu, platypus and quail.
* [svn-r25108] Description:Binh-Minh Ribler2014-04-253-6/+29
| | | | | | | | | | - Put back Exception::printError for backward compatibility - Added static member function Exception::printErrorStack to print error stack without an instance of Exception. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r25061] Description:Binh-Minh Ribler2014-04-1722-54/+325
| | | | | | | | | | | Put back overloaded functions for backward compatibility: - were replaced by better prototyped versions, such as Attribute::getName. - were modified to add const to constant arguments. Added notes for future removal in documentation. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r25034] Snapshot version 1.9 release 177HDF Tester2014-04-131-1/+1
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* [svn-r25020] Description:Binh-Minh Ribler2014-04-128-15/+21
| | | | | | | | | | - Fixed a few comments that Doxygen gave warnings on. - Removed stylesheet from configuration so Doxygen will use the default stylesheet and removed the CLANG-related lines to eliminate another error since we're not using that feature, so the lines should not present. (from cpp_doc_config) Platforms tested: Linux/32 2.6 (jam) - only changing comments
* [svn-r25019] Description:Binh-Minh Ribler2014-04-111-18/+19
| | | | | | | Updated configuration file to use Doxygen 1.8.5 properly. Verified with Doxygen 1.8.5 on Jam, using bin/release. After committing, this will be checked out and verified again to make sure.
* [svn-r24997] Added compiler versions for mpich to settings file and ↵Larry Knox2014-04-092-9/+19
| | | | | | | | | | | | | configure summary. For make installcheck, compile and run installed examples using the installed scripts. They were being compiled but not run. Add Fortran2003 examples to the run-ex-fortran script when fortran2003 is enabled. Set flag to -O3 in production mode for Intel compilers other than those with specified other settings. Gentoo patches: Remove unnecessary setting of LD_LIBRARY_PATH from configure. Prevent potential array subscript out of bounds error in perform/pio_engine.c and sio_engine.c. Tested with h5committest on jam, koala, ostrich and platypus, on emu and kite, and parallel tests on jam, koala and platypus with mpich built with gnu 4.8.2 and with intel compilers.
* [svn-r24996] Description:Binh-Minh Ribler2014-04-094-74/+2196
| | | | | | | | Fixed some minor documentation mistakes. Updated configuration file for Doxygen. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam)
* [svn-r24994] Purpose: Removed some warningsBinh-Minh Ribler2014-04-096-15/+42
| | | | | | | | | Description: Turned on warnings and removed some of those. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24991] Purpose: Fixed HDFFV-3384Binh-Minh Ribler2014-04-0917-35/+33
| | | | | | | | | | Description: - Added const to const arguments - Fixed miscellaneous comments Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24983] Purpose: Fix HDFFV-8367Binh-Minh Ribler2014-04-073-0/+191
| | | | | | | | | | | | | | Description: - Added wrappers to CommomFG for H5Oget_info_by_name() to get a child object's type (requested by user) H5O_type_t childObjType(const H5std_string& objname) const; H5O_type_t childObjType(const char* objname) const; H5O_type_t childObjType(hsize_t index, H5_index_t index_type=H5_INDEX_NAME, H5_iter_order_t order=H5_ITER_INC, const char* objname=".") const; - Added tests to tobject.cpp Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24975] Description:Binh-Minh Ribler2014-04-071-0/+1
| | | | Added c++/test/tobject.cpp
* [svn-r24969] Description:Binh-Minh Ribler2014-04-0618-74/+498
| | | | | | | | | | | | | | - Added wrappers to H5Object for H5Iget_name() to get object's name ssize_t getObjName(char *obj_name, size_t buf_size = 0) const; ssize_t getObjName(H5std_string& obj_name, size_t len = 0) const; H5std_string getObjName() const; - Added tests tobject.cpp - Added to various cleanup_* functions in tests to remove generated files - Added an overload H5I_type_t getHDFObjType() to get object's type Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu) with gmake
* [svn-r24966] Snapshot version 1.9 release 176HDF Tester2014-04-061-1/+1
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* [svn-r24948] Group tests by Common nameAllen Byrne2014-04-022-23/+23
| | | | | | Remove WIN32 AND NOT CYGWIN if blocks - should be just WIN32 Tested: local linux CMake
* [svn-r24938] Description:Binh-Minh Ribler2014-04-014-51/+222
| | | | | | | | | | | | | | | | | | | - Overloaded Atribute::getName to take a char* for the attribute name: ssize_t Attribute::getName(char* attr_name, size_t buf_size) - Switched the arguments in this function: ssize_t getName(size_t buf_size, H5std_string& attr_name) so it became: ssize_t getName(H5std_string& attr_name, size_t buf_size) The second argument is default to 0, and can be skipped. - Removed this function: H5std_string getName(size_t buf_size); it'll collide with the first function when that function takes a NULL for the first argument, and uses default value for the second argument. - Added more tests Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24937] Adds an H5free_memory() function to the library for use withDana Robinson2014-03-313-3/+3
| | | | | | | | | | | | functions that return library-allocated memory. The test and tool code were modified to use this new function where it's appropriate. Fixes HDFFV-7710, HDFFV-8519, and HDFFV-8551 Tested on: 64-bit Windows 7 w/ VS2012 32-bit LE linux w/ parallel and fortran (jam) 32-bit LE linux w/ fortran and C++ (jam)
* [svn-r24932] HDFFV-8290: Remove unnecessary $(srcdir) and use AM_CPPFLAGS ↵Allen Byrne2014-03-316-257/+1728
| | | | | | instead of INCLUDES. Update automake to 1.14.1 h5committest
* [svn-r24929] Description:Binh-Minh Ribler2014-03-312-4/+7
| | | | | | | | | Added proper deallocation/allocation to test. Revised incorrect comments. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24925] Purpose: Fix HDFFV-7907Binh-Minh Ribler2014-03-309-8/+296
| | | | | | | | | | | | | | | | | | | | | | Description: Added transform property list functions // Constructor creates a dataset transform property list. DSetMemXferPropList(const char* expression); // Sets data transform expression. void setDataTransform(const char* expression) const; void setDataTransform(const H5std_string& expression) const; // Gets data transform expression. ssize_t getDataTransform(char* exp, size_t buf_size=0) const; H5std_string getDataTransform() const; Added test file tdspl.cpp. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24924] Snapshot version 1.9 release 175HDF Tester2014-03-301-1/+1
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* [svn-r24912] Purpose: Fix HDFFV-8642Binh-Minh Ribler2014-03-274-6/+118
| | | | | | | | | | Description: Added CompType::setSize(size_t size) to set size for compound data type as H5Tset_size had been changed. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24901] Description:Binh-Minh Ribler2014-03-261-2/+2
| | | | | | | | | Fixed mismatched function prototype/definition that caused daily test failure on emu/production/HDF5TestExpress=1. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24895] Add INTERFACE properties to libsAllen Byrne2014-03-251-1/+4
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* [svn-r24867] Description:Binh-Minh Ribler2014-03-225-10/+16
| | | | | | | | | | - Added a null terminator to the comment returned from the C call, in getComment methods - Some minor cleanup Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) Linux/64 2.6 (platypus)/PGI compilers
* [svn-r24865] Description:Binh-Minh Ribler2014-03-2111-61/+156
| | | | | | | | | | | - Added another overload for char* argument: ssize_t getComment(const char* name, const size_t buf_size, char* comment) - Changed default value to 0 for the other two getComment methods - Added HDmemset to after every char string allocation to clear the buffer Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) Linux/64 2.6 (platypus)/PGI compilers
* [svn-r24864] Description:Quincey Koziol2014-03-215-12/+0
| | | | | | | | | | | | | | | | | | Remove all traces of MPI-POSIX VFD and GPFS detection/code. Remove remaining traces of stream VFD. Remove testpar/t_posix_compliant test (it's not actually verifying anything). Clean up H5D__mpio_opt_possible() further. Moved environment variable that disables MPI collective operations into MPI-IO VFD (instead of it being in src/H5S.c). A few other small code cleanups. Tested on: Mac OSX/64 10.9.2 (amazon) w/parallel & serial
* [svn-r24830] Purpose: HDFFV-8623Binh-Minh Ribler2014-03-184-26/+26
| | | | | | | | | | | | Description: Applied patch from user Jason Newton. JIRA issue HDFFV-8623, patch 9, improve c++ compatibility with exceptions. All additions of "throw()" are included. Exception::what() is not added because it is not necessary. It was suggested for the name, which follows stdlib. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) Linux/64 2.6 (koala)/PGI compilers
* [svn-r24824] HDFFV-8700 -Allen Byrne2014-03-181-3/+3
| | | | | | | | KitWare recommendations: Change CMake commands to lower case. Bump up CMake minimum versions. Split test file into separate file for h5repack test. Tested: local linux
* [svn-r24789] Bump up the minimum cmake versionAllen Byrne2014-03-134-4/+4
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* [svn-r24782] HDFFV-8700 -Allen Byrne2014-03-115-21/+21
| | | | KitWare recommendations: Change CMake commands to lower case.
* [svn-r24781] HDFFV-8700 -Allen Byrne2014-03-116-77/+77
| | | | | | | KitWare recommendations: Change CMake commands to lower case. Remove INCLUDE_DIRECTORIES in src for target level includes. Change ADD_DEFINITIONS package debug defines into CMake option. Remove -DNDEBUG
* [svn-r24770] Snapshot version 1.9 release 174HDF Tester2014-03-091-1/+1
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* [svn-r24753] Snapshot version 1.9 release 173HDF Tester2014-03-021-1/+1
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* [svn-r24716] Snapshot version 1.9 release 172HDF Tester2014-02-161-1/+1
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* [svn-r24698] Snapshot version 1.9 release 171HDF Tester2014-02-091-1/+1
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* [svn-r24682] Add IF SHARED block around Windows PDB file generation command.Allen Byrne2014-02-041-2/+3
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* [svn-r24676] Snapshot version 1.9 release 170HDF Tester2014-02-021-1/+1
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* [svn-r24465] Snapshot version 1.9 release 169HDF Tester2013-11-251-1/+1
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* [svn-r24400] Maintenance: When the libraries are built and tested in place, ↵Elena Pourmal2013-11-032-1/+7
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | several files are left behind by "make distclean" (see below); modified appropriate Makefile.am files and ran bin/reconfigure to create Makefile.in to fix the problem. Here is the list of the files "make disclean" doesn't remove: tools/h5dump/testfiles tools/h5repack/testfiles/h5diff_attr1.h5 tools/h5repack/testfiles/tfamily00000.h5 tools/h5repack/testfiles/tfamily00010.h5 tools/h5repack/testfiles/tfamily00002.h5 tools/h5repack/testfiles/tfamily00004.h5 tools/h5repack/testfiles/tfamily00006.h5 tools/h5repack/testfiles/tfamily00008.h5 tools/h5repack/testfiles/tfamily00001.h5 tools/h5repack/testfiles/tfamily00003.h5 tools/h5repack/testfiles/tfamily00005.h5 tools/h5repack/testfiles/tfamily00007.h5 tools/h5repack/testfiles/tfamily00009.h5 tools/h5jam/testfiles/h5jam-ub-nohdf5.txt.err-sav tools/h5jam/testfiles/h5jam-help.txt.err-sav tools/h5jam/testfiles/h5unjam-help.txt.err-sav tools/h5jam/testfiles/h5jam-ub-nohdf5.txt.out-sav tools/h5jam/testfiles/h5jam-help.txt.out-sav tools/h5jam/testfiles/h5unjam-help.txt.out-sav hl/fortran/test/dsetf5.h5 c++/test/tattr_multi.h5 c++/test/tattr_scalar.h5 c++/test/tfattrs.h5 c++/test/tattr_basic.h5 c++/test/tattr_compound.h5 c++/test/tattr_dtype.h5 Tested on jam and emu in place and using srcdir with the svn stat command. This fix doesn't address two problems: tool/h5dump/testfiles directory is not removed by "make distclean" and it should be tools/misc/testfiles directory is removed by "make distclean" and it shouldn't be
* [svn-r24392] Cleanup testfiles from scripts. Update lists of files to be ↵Allen Byrne2013-11-011-0/+25
| | | | | | cleaned. CMake update to clean testfiles. Tested: local cmake, autools, and h5committest
* [svn-r24376] Updated all code to use HDmalloc, HDcalloc, and HDfree.Dana Robinson2013-10-311-28/+28
| | | | | | | | | | | | | Prep work for adding a memory free function, part of HDFFV-8551. Tested on: 32-bit LE linux (jam) * with C++, Fortran * with thread safety on These are minor changes (almost entirely renaming foo functions to HDfoo) that don't change functionality. This should not require a full commit test.
* [svn-r24362] Snapshot version 1.9 release 168HDF Tester2013-10-271-1/+1
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* [svn-r24334] Snapshot version 1.9 release 167HDF Tester2013-10-201-1/+1
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* [svn-r24291] Description:Binh-Minh Ribler2013-10-1534-214/+237
| | | | | | | | | - Added a lot of documentation to classes for Reference Manual. - Fixed some format inconsistencies Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) Linux/64 2.6 (koala)/PGI compilers
* [svn-r24287] Snapshot version 1.9 release 166HDF Tester2013-10-131-1/+1
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