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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-01-131-1/+1
|\ | | | | | | | | * commit 'bd85e57904f1f943774bb99ea5e8b0d074db0edb': tools/test/h5diff/testh5diff.sh.in: Add code to delete copies of test .h5 files copied from tools/testfiles/vds to tools/test/h5diff/testfiles when running "make check" for an in-source build.
| * tools/test/h5diff/testh5diff.sh.in:lrknox2017-01-131-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Add code to delete copies of test .h5 files copied from tools/testfiles/vds to tools/test/h5diff/testfiles when running "make check" for an in-source build. tools/test/misc/testh5repart.sh.in: Change the name of the temporary test directory from "testfiles" which is also used for 2 h5mkgrp test files under source control to "testrepart" to avoid deleting source controlled files when running "make check" in the source directory. Fix test scripts that remove source-controlled files during "make check" when run in-source. Fix test scripts that don't remove test files because they add files to test directories but don't remove them if the build directories are the same as the source directory. Fix any test source file or Makefile.am files for tests that leave data files are removed by neither "make check" nor "make distclean".
* | HDFFV-10094: upgrade cmake command conventionsAllen Byrne2017-01-112-3/+42
| | | | | | Also converted tests to use macros
* | Update cmake min version and cmake command conventionAllen Byrne2017-01-106-30/+29
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* Description:Binh-Minh Ribler2017-01-041-0/+2
| | | | Added H5LaccProp.[h,cpp].
* Removed commented section left in by mistake.Binh-Minh Ribler2017-01-031-8/+0
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* Purpose: Add more testsBinh-Minh Ribler2017-01-034-23/+45
| | | | | | | | | Description: Added more tests for the new constructors that replaced openXxxType() Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Purpose: Add new wrappersBinh-Minh Ribler2016-12-2832-74/+391
| | | | | | | | | | | | | | Description: Added wrappers H5Location::exists() for H5Lexists. Added wrapper H5Object::objVersion() to return the header version of an HDF5 object. Added new class LinkAccPropList to be used by H5Location::exists() Added new exception: ObjHeaderIException for H5Object::objVersion() Rearranged source files in Makefile.am Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Description:Binh-Minh Ribler2016-12-2319-65/+9
| | | | | | Removed commented out code and fixed miscellaneous typos. Platforms tested: Linux/32 2.6 (jam) (very minor)
* Purpose: Improvement for HDFFV-10004Binh-Minh Ribler2016-12-1938-414/+942
| | | | | | | | | | | | | | | | | | | | | Description: When adding wrappers for H5Lexists, a new class, LinkAccPropList, was added to the C++ API, triggered complicated circular dependencies. Thus, some improvement was made to resolve the problems. - Replaced existing functions openXxxType with individual type constructors + Added individual XxxType constructors to replace the existing functions openXxxType because it's rather awkward to use these functions. + Moved openXxxType from H5Location back to CommonFG + Put back CommonFG as a baseclass of Group for openXxxType functions. + This replacement should improve usability and prevent the problem of circular dependencies. - Removed overloaded constructor that takes an Attribute when there is already one that takes H5Location because Attribute inherits from H5Location now. Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test) Linux/64 (platypus)
* Snapshot version 1.9 release 235hdftest2016-12-161-1/+1
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* Bring SWMR support in to the main development branch. (Finally!) More testsQuincey Koziol2016-12-021-1/+1
| | | | and the tool and API wrappers will be coming in over the weekend.
* Description:Binh-Minh Ribler2016-11-1416-144/+53
| | | | | | | | Removed H5_NO_NAMESPACE from the examples. They were missed from the previous cleanup. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus)
* Code style and warning cleanups, from revise_chunks branch.Quincey Koziol2016-11-062-2/+0
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* Description:Binh-Minh Ribler2016-10-261-0/+2
| | | | | | | | | | | - In the test for HDFFV-9758, a pragma pack(1) caused failure on Emu because Sparc cannot access misaligned data. Changed it to pack() to do the default alignment. - Added DOXYGEN_SHOULD_SKIP_THIS blocks to private elements to prevent warnings from doxygen. Platforms tested: SunOS 5.11 (emu) Linux/32 2.6 (jam)
* Description:Binh-Minh Ribler2016-10-1974-528/+109
| | | | | | | | | | | | Removed obsolet macros from C++ API: H5_NO_NAMESPACE, H5_NO_STD, __cplusplus Leave OLD_HEADER_FILENAME because iostream.h might still be in use, until further checking is done. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test) Jelly
* Description:Binh-Minh Ribler2016-10-142-6/+3
| | | | | | | | Fixed typo that caused daily test failed when --enable-deprecated-symbols is used. Also, removed a commented-out function. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) with --enable-deprecated-symbols
* Description:Binh-Minh Ribler2016-10-142-2/+0
| | | | | | Removed commented out lines. Platform tested Jam (only comments)
* Purpose: Fix bug HDFFR-9920 cont.Binh-Minh Ribler2016-10-142-0/+3
| | | | | Description: Added new test file titerate.cpp.
* Purpose: Updated documentationBinh-Minh Ribler2016-10-1424-75/+115
| | | | | | | | | Description: Revised class brief description and other comments for up-to-date info. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Purpose: Fix bug HDFFR-9920 cont.Binh-Minh Ribler2016-10-1431-1469/+2070
| | | | | | | | | | | | | Description: Adding user's test revealed a flaw in the fix. Moved CommonFG's functions in Group to H5Location, so that they could be called by objects that can be used to specify a location Also, rearranged many "#include" header files to resolve conflicts. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Add support for namespace and add tools to binaries configAllen Byrne2016-10-141-0/+1
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* Snapshot release: increment version.lrknox2016-10-011-1/+1
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* Purpose: Code cleanupBinh-Minh Ribler2016-09-022-5/+22
| | | | | | | | | | Description: - Used FP_EPSILON in comparing float values to verify read data - Casted C macro to fix mismatched types in verify_val calls Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Add VFD name to test folderAllen Byrne2016-09-011-1/+2
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* [svn-r30311] Purpose: Fix bug HDFFR-9920 cont.Binh-Minh Ribler2016-08-2224-411/+374
| | | | | | | | | | | | | | | | | | | | | | | | | | trunk: Description: Continued rearranging the classes to model the relationship of HDF5 objects more accurately. The changes included: - in the baseclass list of Attribute, changed "public IdComponent" to "public H5Location", because location sometime can be specified with attribute - moved H5A wrappers in H5Location to H5Object because H5A functions can't be called on attribute id - removed the stubs Attribute::iterateAttrs and Attribute::renameAttr - removed Attribute::getFileName and Attribute::flush, because H5Location has them - result of the modified partial class diagram, regarding Attribute IdComponent | H5Location AbstractDs / \ / H5Object Attribute Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r30309] Purpose: Fix bug HDFFR-9920Binh-Minh Ribler2016-08-2023-1408/+1541
| | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Rearranged the classes to model the relationship of HDF5 objects more accurately. The changes included: - moved CommonFG's methods to Group - removed CommonFG from Group's base class list - removed CommonFG from H5File's base class list and changed "public H5Location" to "public Group" in the base class list - CommonFG became unused - result of the modified partial class diagram: IdComponent | H5Location / H5Object | / / \ DadaType Group DataSet | H5File Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r30279] Purpose: Code improvement (HDFFR-9725)Binh-Minh Ribler2016-08-1213-101/+78
| | | | | | | | | Description: Removed deprecated functions in previous releases due to missing const. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r30272] Purpose: Code improvementBinh-Minh Ribler2016-08-099-82/+37
| | | | | | | | | | | Description: - Added "const" to arguments that should be const - Added "const" to const functions, i.e., function that don't change the objects they operate on. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r30237] HDFFV-9939: Change cmake commands to reduce POST_BUILD custom ↵Allen Byrne2016-08-012-12/+7
| | | | commands. Fixes possible overruns on windows command lines.
* [svn-r30201] Description:Quincey Koziol2016-07-181-0/+3
| | | | | | | | | Switch test framework to dynamically allocate the testing array, and expand the length of the description field. Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r30058] Correct typo in compile scripts that causes dropping of ↵Larry Knox2016-06-081-1/+1
| | | | | | filename in -o outfile. Addresses HDFFV-9530 and HDFFV-9938.
* [svn-r29862] Convert source list names from *_SRCS to *_SOURCES.Allen Byrne2016-05-042-5/+5
| | | | Add/convert most tools to use new HDF5_TOOLS_DIR instead of HDF5_TOOLS_SRC_DIR CMake VAR.
* [svn-r29786] Purpose: Add new wrapperBinh-Minh Ribler2016-04-254-21/+155
| | | | | | | | | Description: Added wrapper for H5Tset_nbit: void DSetCreatPropList::setNbit() const. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29782] Purpose: Code improvementBinh-Minh Ribler2016-04-245-111/+181
| | | | | | | | | | | | | Description: - Removed ArrayType::rank and ArrayType::dimensions and modified the methods ArrayType::getArrayNDims and ArrayType::getArrayDims to always call the C functions to get the rank and dimensions. - Overloaded ArrayType::getArrayNDims and ArrayType::getArrayDims to provide const version and marked the non-const version deprecated. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29766] Description:Binh-Minh Ribler2016-04-223-9/+11
| | | | | | | - Changed object in catch statements to reference (left over from previous) Platforms tested: Linux/32 2.6 (jam) (very minor)
* [svn-r29759] Purpose: Code improvementsBinh-Minh Ribler2016-04-2230-222/+256
| | | | | | | | | | | | Description: - Changed object in catch statements to reference - Replaced old-style casts or reinterpret_cast with static_cast - Removed unused name H5Library::need_cleanup - Removed Exception::printError from documentation Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29379] Add individual LT_VERS_* variables for wrapper libraries: c++, ↵Larry Knox2016-03-091-1/+1
| | | | | | | | | | | | | | | | fortran, java, hl, hl/c++, hl/fortran to so that the shared object version numbers can be incremented independently. Disabled auto-increment of shared object version numbers by h5vers. Files modified: config/lt_vers.am java/src/jni/Makefile.am hl/src/Makefile.am hl/c++/src/Makefile.am hl/fortran/src/Makefile.am c++/src/Makefile.am bin/h5vers fortran/src/Makefile.am
* [svn-r29362] Description:Binh-Minh Ribler2016-03-091-1/+0
| | | | | | Removed another left-over commented-out line. Platforms tested: Linux/64 (platypus) - very minor
* [svn-r29361] Purpose: CorrectionBinh-Minh Ribler2016-03-093-18/+16
| | | | | | | | | | Description: Replaced static_cast with reinterpret_cast for "void *". Removed some commented-out old code. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29340] Purpose: Code cleanupBinh-Minh Ribler2016-03-0812-83/+84
| | | | | | | | | | | | | | | Description: - Removed many warnings: warning: use of old-style cast warning: enumeration value ‘H5D_VIRTUAL’ not handled in switch warning: comparison between signed and unsigned There are others of the same warnings and they will be taken care of in the next release. - Made some code reuse between overloads Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29322] Purpose: Remove obsoletesBinh-Minh Ribler2016-03-078-93/+126
| | | | | | | | | | Description: Removed obsolete functions from the documentation. They are still in the code, however, until the next two releases, just in case. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29306] Purpose: Add functionBinh-Minh Ribler2016-03-0713-48/+158
| | | | | | | | | | Description: Added member function ArrayType::operator= because ArrayType has pointer data members. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29226] HDFFV-9552: merge in java code.Allen Byrne2016-02-291-1/+1
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* [svn-r29004] Description:Binh-Minh Ribler2016-01-281-2/+2
| | | | | | Removed extra ';'. Platform tested jam (very minor)
* [svn-r28906] Description:Binh-Minh Ribler2016-01-151-0/+1
| | | | Added c++/test/tarray.cpp.
* [svn-r28905] Purpose: Fix user reported problemBinh-Minh Ribler2016-01-159-57/+407
| | | | | | | | | | | | | | | | Description: User Adam Rosenberger reported a failure when using the member function AbstractDs::getArrayType(). This problem was caused by missing initialization of the ArrayType's members in some cases. Solution: - Added ArrayType::setArrayInfo() to retrieve rank and dimensions of an array and store them in memory for easy access. - Re-factored a few functions to use the new function. - We'll give him 1.8.16 patch Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r28730] Snapshot version 1.9 release 233HDF Tester2015-12-281-1/+1
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* [svn-r28138] Add first support for _Bool and make hbool_t a "real" _Bool if ↵Jerome Soumagne2015-10-202-2/+2
| | | | | | | | | | | | | | available Fix tests accordingly and fix misuse of hbool_t in various places Fix initialization of H5Pgcpl/ocpl structs in property decoding routines Tested on: Linux/32 (jam) Linux/64 (platypus) Linux/PPC64 (ostrich) MacOSX/64 10.11
* [svn-r28047] Purpose: Fix memory leaksBinh-Minh Ribler2015-10-137-39/+36
| | | | | | | | | | | | | Description: - Implemented the friend function void f_PropList_setId(PropList* plist, hid_t new_id) to work around the same problem described in trunk r26655, for the API DataSet::getCreatePlist() - Cleaned up some comments and obsolete functions Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
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