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* New references for Dimension Scale APIs (#1139)jhendersonHDF2021-11-051-25/+26
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Enable usage of new-style references with dimension scale APIs * Add API to check if an object ID represents a native connector object * Modified code to use new function H5DSwith_new_ref to determine if new references should be used with Dimension Scales. The new function return TRUE if non-native connector is used or if H5_DIMENSION_SCALES_WITH_NEW_REF varible is define at configure time (--enable-dimension-scales-with-new-ref). Tested on jelly. ToDo: generate testing file on BE system and enable the test; add flag to CMake; test netCDF-4 with the new references. * Adding new test files generated on BE system (hedgehog) created by 32 and 64-bit library. test_ds chokes on test_ds_le_new_ref.h5 on BE system; test passes for test_ds_be_new_ref-32bit.h5 for the 32-bit library and fails for the 64-bit library, and vice versa. I am checking the files for further investigation; but current implementation of the new references is not portable between LE and BE systems, and 32 and 64-bit systems. * Minor fixes for testing issues * Update test_ds.c Enabled broken test; tests pass now. * Update RELEASE.txt Documented new option to use new references with the HDF5 dimension scales APIs (H5DS*). * Update MANIFEST for new 32-bit new-style references test file for H5DS APIs * Update 'dimension scales w/ new-style refs' feature based on review Co-authored-by: Elena <epourmal@hdfgroup.org>
* HDFFV-11266 - add option to build HL tools (#1018)Allen Byrne2021-09-161-0/+1
| | | | | | | * HDFFV-11266 - add option to build HL tools * Correct if syntax * Correct name of conditional
* Squash merge of file locking fixesDana Robinson2020-08-031-0/+1
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* Merge branch 'develop' of ↵Jacob Smith2020-04-071-3/+3
|\ | | | | | | https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into feature/vfd_splitter_mirror_a
| * Minor updates and fix settings for fortran flagsAllen Byrne2020-04-061-1/+1
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| * TRILAB-192 add comparable clang flagsAllen Byrne2020-03-271-2/+2
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* | Add Splitter VFD to library.Jacob Smith2020-03-131-0/+1
|/ | | | | | | | | | | | | | | * "Simultaneous and equivalent" Read-Write and Write-Only channels for file I/O. * Only supports drivers with the H5FD_FEAT_DEFAULT_VFD_COMPATIBLE flag for now, preventing issues with multi-file drivers. Add Mirror VFD to library. * Write-only operations over a network. * Uses TCP/IP sockets. * Server and auxiliary server-shutdown programs provided in a new directory, `utils/mirror_vfd`. * Automated testing via loopback ("remote" of localhost).
* HDFFV-10901 add missing config optionsAllen Byrne2019-09-131-4/+4
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* Squashed commit of the following:Larry Knox2019-07-251-0/+2
| | | | | | | | | | | Merge changes from update_merged_S3_HDFS branch into develop. commit d5034315aea88629929ac0c9c59ebfafd5f21a31 Merge: 9c48823 d3fdcd8 Author: Larry Knox <lrknox@hdfgroup.org> Date: Thu Jul 25 08:24:53 2019 -0500 Merge branch 'develop' into update_merged_S3_HDFS
* Fixed Build HDF Tests name in CMake's libhdf5 settingsDhvanil Popat2019-07-031-1/+1
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* Fixed libhdf5 settings file for both autotools & CMakeDhvanil Popat2019-06-251-0/+2
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* HDFFV-10805 Add option to only build shared targetsAllen Byrne2019-06-181-5/+5
| | | | | HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static HDFFV-10803 Update FindSZIP.cmake find module Remove unneeded modules and update java modules
* Squash merge of MDC logging changes.Dana Robinson2018-12-211-1/+0
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* Add Autotools and CMake checks for big I/O MPI-3 functionsJordan Henderson2018-07-311-0/+1
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* Add hdf5settings section for parallel compression status in CMake buildsJordan Henderson2018-07-311-17/+18
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* Fix windows compile errors abstract out common settingsAllen Byrne2018-01-291-1/+1
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* HDFFV-10385 Correct name of varAllen Byrne2018-01-221-1/+1
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* HDFFV-10385 refactor CMAKE_BUILD_TYPE usageAllen Byrne2018-01-091-3/+3
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* [svn-r29226] HDFFV-9552: merge in java code.Allen Byrne2016-02-291-22/+34
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* [svn-r28777] Description:Quincey Koziol2016-01-031-0/+1
| | | | | | | | | | Add --enable-memory-alloc-sanity-check option to configure, to track and sanity check memory allocations within the library. This is orthogonal to the --enable-using-memchecker option and can be used with/without it. Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r27493] Trying again to merge the F2003_v1.10 branch to the trunk.Scot Breitenfeld2015-08-111-1/+0
| | | | Tested: h5committest --PASSED--
* [svn-r27489] reverted merge of branchScot Breitenfeld2015-08-111-0/+1
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* [svn-r27469] Merge from trunk with dual-binary CMake code.Allen Byrne2015-08-051-2/+2
| | | | Tested: local linux with CMake
* [svn-r27116] svn merge -r26937:27115 https://svn.hdfgroup.uiuc.edu/hdf5/trunkScot Breitenfeld2015-05-271-3/+7
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| * [svn-r26944] Match src folder versionAllen Byrne2015-04-281-3/+7
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* | [svn-r26877] removed references to F2003Scot Breitenfeld2015-04-211-1/+0
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* [svn-r26180] merge configure fixes for HDFFV-9068,9069,9096,9097,9135 from ↵Mohamad Chaarawi2015-02-161-1/+0
| | | | | | | | | | | | autotools_rework branch: - Remove Infering parallel compilers (C and Fortran) from configure.ac - Remove restriction to build shared with parallel - Cleanup parallel sections in configure.ac - remove large file support checks - MPE fixes. tested with h5committest.
* [svn-r25043] Correct CPPFLAGS value.Allen Byrne2014-04-141-1/+1
| | | | Correct test DEPENDS format.
* [svn-r24864] Description:Quincey Koziol2014-03-211-1/+0
| | | | | | | | | | | | | | | | | | Remove all traces of MPI-POSIX VFD and GPFS detection/code. Remove remaining traces of stream VFD. Remove testpar/t_posix_compliant test (it's not actually verifying anything). Clean up H5D__mpio_opt_possible() further. Moved environment variable that disables MPI collective operations into MPI-IO VFD (instead of it being in src/H5S.c). A few other small code cleanups. Tested on: Mac OSX/64 10.9.2 (amazon) w/parallel & serial
* [svn-r24703] Add Binary README.txt file generationAllen Byrne2014-02-131-1/+1
| | | | Tested: local linux cmake
* [svn-r22614] Revert heading of summary.Allen Byrne2012-07-301-1/+1
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* [svn-r22602] Allen Byrne2012-07-251-1/+1
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* [svn-r21425] Add 2003 fortran to settings textAllen Byrne2011-09-271-0/+1
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* [svn-r21256] Add libinfo and test to cmake - JIRA 1243Allen Byrne2011-08-181-44/+44
| | | | Tested: local linux
* [svn-r19776] Corrected handling of largefile and linux_lfs handling.Allen Byrne2010-11-121-1/+1
| | | | | Synched cmake version of H5pubconf.h.in Added another variation of H5detect warning to ignore list.
* [svn-r19107] Move Resources folder to config/cmakeAllen Byrne2010-07-201-0/+68
Tested: Local Linux
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