| Commit message (Collapse) | Author | Age | Files | Lines |
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* Use windows ENV var for default install dir setting
* Change variable name
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* Promote some GCC warnings back to errors and deal with build breakage.
I tested configuring and building with GCC 8.3.0 with
`.../configure --prefix=$HOME/wrk/install/manydsets --enable-build-mode=production --enable-symbols=-gdwarf-4 --enable-warnings-as-errors --enable-java --enable-hl --enable-fortran --enable-cxx --enable-mirror-vfd --enable-ros3-vfd --enable-direct-vfd`
and with the same options but `--enable-build-mode=debug`.
* Promote -Wrestrict to -Werror=restrict to help catch overlapping
arguments to strcpy, memcpy, et cetera, at compile time.
* NFCI: sort lines.
* Committing clang-format changes
* NFCI: remove whitespace at EOL.
* Re-use temporary variable `shared`.
* Remove merge oopsie.
* Mention that no op codes are understood per review comment.
* Change this back to the develop branch's way, since this change isn't
integral to the PR.
* Committing clang-format changes
* NFCI: reduce differences with `develop` branch in the hope that that
also kicks off CI.
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
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* Minor things noticed while merging to 1.10
* Set HDF5_DRIVER back in string
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* Do not conditionally compile code that uses a pointer dereference
and assignment to copy a potentially unaligned variable to aligned
automatic storage, or vice versa. Instead, always use naked `memcpy(3)`s.
Disassembling the generated code reveals that the `memcpy(3)`s optimize
(`-O3`) to a single `mov` instruction for x86_64, which is not strict
about alignment.
This change reduces the size of code and scripts by 143 lines, eases
our way to cross-compilation, and avoids invoking undefined behavior.
* Committing clang-format changes
* Per discussion, use HD and add comments.
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
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* Change ENV to CMake var
* Fix typo deletion
* Fix typo
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to MANIFEST (#1460)
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* Add release note for #1438
* fix typos.
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* Updated plugins project required adjustments
* Updated plugins need to distinguish external libs
* Fix missed rename
* Use same name for windows as linux - avoid name clash
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* Add -showconfig to h5cc scripts to dump libhdf5.settings file
* Added note
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* H5Lexists docs: Removed reference to 1.8.16 since the change is the 1.8.x releases, HDFFV-11289
* H5Oget_info_by_name, name can be any object, not just a group
* Converted README.txt to README.md and updated files referring to README.txt to README.md.
* removed references to README.txt
* updated MANIFEST
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* fixed missed closing of a dataset
* fixed missed closing of a dataset
* fixed typo in error return
* Committing clang-format changes
* minor edits
* code format
* Committing clang-format changes
* code format
* minor edit
* switched from using MPI_count, to actual bytes written for H5FD_mpio_debug rw debugging
* Committing clang-format changes
* changed size_i in printf to reflect the I/O.
* Committing clang-format changes
* Fixed seg fault with xlf on BE with -qintsize=8
* fixed error function string
* spelling corrections via codespell, added new spell check github actions
* Committing clang-format changes
* misc
* misc
* misc
* misc
* misc
* misc
* misc
* misc
* misc
* misc
* misc
* misc
* misc
* misc
* Committing clang-format changes
* misc
* misc
* misc
* misc
* misc
* misc
* Committing clang-format changes
* misc
* work around for https://github.com/codespell-project/codespell/issues/2137
* misc
* added missing file
* misc
* misc.
* misc
* switch to using Codespell with GitHub Actions
* misc.
* misc.
* fixed more sp errors
* Fix new typos found by codespell.
* fixed proceed with precede
* fixed variable in fortran test
* fixed minnum
* updated spelling list
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
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(libMFU) … (#1177)
Adds tool h5dwalk and configure options to enable building it.
Co-authored-by: Richard Warren <Richard.Warren@hdfgroup.org>
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Richard.Warren <richard.warren@jelly.ad.hdfgroup.org>
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
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* Fix order of fortran define
* fix typo
* Fix REGEX and newlines
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* Use stdout instead of file for configure check
* Make change requested by #1157
* Change fortran to use stderr for configure
* Correct typo
* remove obsolete file check
* Fortran statement fix
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* Enable usage of new-style references with dimension scale APIs
* Add API to check if an object ID represents a native connector object
* Modified code to use new function H5DSwith_new_ref to determine if new references should be used with
Dimension Scales. The new function return TRUE if non-native connector is used or if H5_DIMENSION_SCALES_WITH_NEW_REF
varible is define at configure time (--enable-dimension-scales-with-new-ref).
Tested on jelly.
ToDo: generate testing file on BE system and enable the test; add flag to CMake; test netCDF-4 with the new references.
* Adding new test files generated on BE system (hedgehog) created by 32 and 64-bit library.
test_ds chokes on test_ds_le_new_ref.h5 on BE system; test passes for test_ds_be_new_ref-32bit.h5
for the 32-bit library and fails for the 64-bit library, and vice versa. I am checking the files for further
investigation; but current implementation of the new references is not portable between LE and BE systems,
and 32 and 64-bit systems.
* Minor fixes for testing issues
* Update test_ds.c
Enabled broken test; tests pass now.
* Update RELEASE.txt
Documented new option to use new references with the HDF5 dimension scales APIs (H5DS*).
* Update MANIFEST for new 32-bit new-style references test file for H5DS APIs
* Update 'dimension scales w/ new-style refs' feature based on review
Co-authored-by: Elena <epourmal@hdfgroup.org>
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* Split dir create into separate macro
* Correct VFD settings
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* Move test utilities to utils/test folder
* Fix makefile assignment
* Add new dir
* add new folder
* Correct copied makefile
* Fix dir typo
* Add missing include dir
* Remove unnecessary lib link
* Correct dependent dirs
* Fix conditional checks
* Disable test if not built
* fix path to executable
* Use fixture for swmr_vfd check
* Add release note
* Correct shell tests and c++ flag warning
* Update autotools c++ warning
* Fix typo
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flags files (#1033)
* Avoid maintenance headaches: delete the `noerror-` variants of the
compiler flags files, since they essentially duplicate the `error-`
files modulo the replacement of `-Werror=` with `-W` and any changes in
comments. (I verified the duplication with a script.)
For autoconf, reinstate the use of the `demote_errors` shell function to
derive the `noerror-` content from the `error-` content. `demote_errors`
replaces `-Werror=` with `-W` when `WARNINGS_AS_ERRORS` is `no`.
Slightly reorder `configure.ac` so that the setting of
`WARNINGS_AS_ERRORS` takes effect before the `error-` files are sourced.
* Take a stab at updating the CMake files to match the changes I made to
the autoconf files to remove `noerror-` files. I'm not much of a CMake
user so these changes are quite rough.
Looks like the duplication can be reduced with the introduction of a new
macro.
* Delete `noerror-` files from the MANIFEST.
* Reduce duplication in the CMake files: perform the
HDF5_ENABLE_WARNINGS_AS_ERRORS test once in the ADD_H5_FLAGS macro.
* Add a release note.
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* Update Platforms Tested in RELEASE.txt.
Remove Tested Configuration Features Summary for updated replacement.
* Set version to 1.13.0-6 for rc6 snapshot.
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* Corrected path searched by CMake find_package command
* Correct path for depend libs
* Adjust examples script for install path
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* HDFFV-11266 - add option to build HL tools
* Correct if syntax
* Correct name of conditional
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* Correction of pkg-config compile script.
* Reword note.
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Change doxygen generated file location
Clang format override for flags
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Instead of looking at `MATCHES 0` which runs a regex and returns a false
positive for any result such as `10`, check if they are equal to `0`.
Also quote `0` to avoid looking it up as a variable (which was left
behind prior to the fix to use `${RETURN_VAR}` in the `c_run` macro).
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* Fix windows compiler issues
Restore MS C++ Default exception handling behavior #885
Remove clang toolchain as it skips compiler checks
* Add check and header gaurd for pwd.h
* Revert change
* Committing clang-format changes
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
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* Changes to docs for using plugins
* VS2019 corrections
* Fix typo
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This is only needed on Windows and always available, so there's no need
to check for it.
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Mostly from CMake
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* Cleans up POSIX/C bits in H5private.h
* Assume difftime exists (C89)
* Reorg AC_CHECK_HEADERS so headers are in alphabetical order
* Split off networking-related AC_CHECK_HEADERS
* Remove unused UNAME_CYGWIN from configure.ac
* Remove checks for unused sys/timeb.h
* Tidying pass over H5private.h HD prefix macros
* Tidy H5win32defs.h
* Add HD prefix to various scanf calls
* Committing clang-format changes
* Fixes to the alarm(2) code used in the tests to make Windows happy
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
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