| Commit message (Collapse) | Author | Age | Files | Lines |
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* Update Autotools to correctly configure oneAPI
Splits the Intel config files under the Autotools into 'classic'
Intel and oneAPI versions, fixing 'unsupported option' messages.
Also turns off `-check uninit` (new in 2023) in Fortran, which kills
the H5_buildiface program due to false positives.
* Enable Fortran in oneAPI CI workflow
* Turn on Fortran in CMake, update LD_LIBRARY_PATH
* Go back to disabling Fortran w/ Intel
For some reason there's a linking problem w/ Fortran
error while loading shared libraries: libifport.so.5: cannot open shared object file: No such file or directory
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* Split intel compiler flags into sub-folders
* Update Intel options for warnings
* Mostly CMake, Autotools needs additional work
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* Correct use of set() command with options
* Force filter off if not found
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
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* Adds a config/clang-fflags options file to support Flang
* Corrects missing "-Wl," from linker options in the libtool wrappers
when using Flang, the MPI Fortran compiler wrappers, and building
the shared library. This would often result in unrecognized options
like -soname.
* Enable -nomp w/ Flang to avoid linking to the OpenMPI library.
CMake can build the parallel, shared library w/ Fortran using AOCC
and Flang, so no changes were needed for that build system.
Fixes GitHub issues #3439, #1588, #366, #280
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* added cmake ieee flag for nagfor
* generalized determining the nag compiler
* fixing some misc. NAG warnings
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* synchronize TGZ naming convention/usage
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Default is -ieee=stop, which causes problems when the H5T
module performs floating-point type introspection.
The new mode is -ieee=full
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Reorganizes the tools files to support the VOL tests
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* H5MM_calloc and malloc are now mapped to stdlib C calls
* H5MM_memcpy now maps directly to memcpy in release builds
* H5MM_memcpy is still implemented as a separate function that
checks for buffer overlap when H5MM_DEBUG is defined
(default w/ debug builds)
* Switches many library memcpy calls to use H5MM_memcpy
* Fixes a possible zero allocation in H5Olayout.c
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The Autotools were handled in a separate commit
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CMake to fix Fortran build failures.
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- If the HDF5 library has been build with either thread-safety or
subfiling VFD feature on it will have an additional dependency
on a threading library. This dependency has been added to the
hdf-config.cmake.in file.
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* removed the use of encoded single apostrophe, and fix H5Dread_chunk from write to read
* updated sanitizer paragraph
* fixed brief description for H5Fget_info
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* Option changed but not all references
* remove quotes from binary var
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* Fix some warnings in developer builds
* Switch approach to Winline flag
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* Fix CMake builds when Subfiling VFD isn't enabled
* Add Subfiling VFD entry to hdf5-config.cmake.in
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* Subfiling VFD source cleanup
Modularize Subfiling CMake code into separate CMakeLists.txt file
Update Mercury util code to latest version and update Copyright
Generate mercury_util_config.h header file instead of using
pre-generated file
Remove unnecessary Mercury functionality
Fix minor warning in Subfiling VFD code
* Remove Mercury headers from Autotools publicly-distributed header list
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* Autotools
* CMake
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* Fixed various -Wmissing-variable-declarations by adding static keyword
* In a few cases, renamed the variable suffix from _g to _s.
* Fixed some -Wmissing-variable-declarations by using different declaration macros
* Fixed various -Wconditional-uninitialized warnings by just initializing variable to zero
* Fixed various -Wcomma warnings
* Fixed clang -Wstrict-prototypes warnings
* Fixed various -Wunused-variable warnings
* Updated some casts to fix the only 3 -Wcast-qual warnings
* Fixed the only -Wsometimes-uninitialized warning
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- Added a cmake variable to the hdf5-config.cmake file which
indicate if the library has been build with or without the
read-only S3 functionality.
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* Revert "Remove long double conversion work-arounds (#3097)"
This reverts commit 1e1dac1dac58fa18f6b7788346d1ba7d3315b0f9.
* Update comments to reflect newer systems
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* Remove unused HD macros
The library prefixes most C and POSIX API calls with 'HD'. We are
going to start removing these so the code looks like normal C.
This PR removes most of the unused HD markup macros.
* Replace ntohl/ntohs
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Removes H5detect and H5make_libsettings from the build and replaces
their functionality with things that don't affect cross-compiling.
H5detect --> floating-point types are now detected on library load
H5make_libsettings --> Moved functionality to a new H5build_settings.c template file
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Several options and public symbols that were provided to paper
over non-standard long double conversions between signed/unsigned
long and long long values were removed from the Autotools and
CMake. These were added twenty years ago, when C99 and 64-bit
platforms were less common and are no longer needed.
Autotools:
--enable-dconv-accuracy
CMake:
HDF5_WANT_DATA_ACCURACY
H5pubconf.h symbols:
H5_WANT_DATA_ACCURACY
H5_LDOUBLE_TO_LONG_SPECIAL
H5_LONG_TO_LDOUBLE_SPECIAL
H5_LDOUBLE_TO_LLONG_ACCURATE
H5_LLONG_TO_LDOUBLE_CORRECT
H5_DISABLE_SOME_LDOUBLE_CONV
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Adds some H5pubconf.h entries and cpp flags for building on MinGW
using the Autotools.
Also updates the Windows-related H5pubconf.h comments to be more
accurate in CMake.
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* HDFCompilerFlags: mask -fstdarg-opt with clang-tidy
`clang-tidy` doesn't understand this `-f` flag and errors out.
* Add helpful comment
---------
Co-authored-by: Sean McBride <sean@rogue-research.com>
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In both CMake and the Autotools, remove checks for:
* lstat
* srandom
In CMake, remove checks for:
* string.h
* strings.h
* stdlib.h
We assume these exist. Configure will always check for them (we don't
add any special code to do this), but there's no reason to duplicate
that nonsense in CMake.
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* Update macOS to 13
* Fix the DYLD_LIBRARY_PATH issue on macOS 12 & 13 + CMake that caused the accum test to fail
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* Fix plugin cache variable name
* Prefix plugin project local variables
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