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* [svn-r25402] Bring 25397/8 from trunk:Mohamad Chaarawi2014-07-101-7/+0
| | | | | | | - remove configure checks for MPI_File_get_size and Big MPI_File_set_size as they are supported by MPIO implementations today. - fix bug in t_mpi.c (HDFFV-8856) tested with h5committest.
* [svn-r25247] Correct propertyAllen Byrne2014-06-102-2/+3
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* [svn-r25225] Description:Quincey Koziol2014-05-291-0/+3
| | | | | | | | | | | | | | | | Bring r25215 from trunk to 1.8 branch: Bring changes from Coverity branch back to trunk: r20914: Use HDstrncpy and HDstrncat! --gh r20915: Use HDstrncpy and HDstrncat! --gh Tested on: MacOSX/64 10.9.3 (amazon) w/gcc 4.9, FORTRAN, C++, multi-threads & parallel (h5committested on the trunk)
* [svn-r25222] Merge cmake_ext_mod into 1.8Allen Byrne2014-05-2721-4316/+16
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* [svn-r25209] Description:Quincey Koziol2014-05-211-3/+79
| | | | | | | | | | | | | | | | | | | Bring r25206 & r25207 from trunk to 1.8 branch: r25206: Add new warning flags for gcc 4.9.x r25207: Merge changes from Coverity branch to trunk: r20907: Original issue was #338. Refactored code to clean up allocations consistantly, completely, check all returns, assign initialization values and handle errors. Tested on: MacOSX/64 10.9.3 (amazon) w/C++, FORTRAN & parallel (h5committested on trunk)
* [svn-r25184] correct path statementAllen Byrne2014-05-121-1/+1
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* [svn-r25111] Changed Subeversion EOL and executable properties. No code changes.Dana Robinson2014-04-258-591/+591
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* [svn-r25100] Added -V to example command line.Allen Byrne2014-04-251-1/+2
| | | | Added note about INSTALLDIR.
* [svn-r25099] Disable fortran by defaultAllen Byrne2014-04-251-9/+6
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* [svn-r25036] Maintenance before creating 1_8_13 branch: changed version ↵Elena Pourmal2014-04-141-1/+1
| | | | number to 1.8.14-snap0
* [svn-r25017] Merge r24997 changes from trunk.Larry Knox2014-04-114-18/+43
| | | | | | | | | | | | | Added compiler versions for mpich to settings file and configure summary. For make installcheck, compile and run installed examples using the installed scripts. They were being compiled but not run. Add Fortran2003 examples to the run-ex-fortran script when fortran2003 is enabled. Set flag to -O3 in production mode for Intel compilers other than those with specified other settings. Gentoo patches: Remove unnecessary setting of LD_LIBRARY_PATH from configure. Prevent potential array subscript out of bounds error in perform/pio_engine.c and sio_engine.c. Tested with h5committest on jam, koala, ostrich and platypus.
* [svn-r24980] HDFFV-8290: Merge automake 1.14.1 changes from trunkAllen Byrne2014-04-072-18/+18
| | | | Tested: h5committest
* [svn-r24906] Merge latest CMake changes from trunk.Allen Byrne2014-03-2621-1354/+1396
| | | | Tested: local linux
* [svn-r24878] Description:Quincey Koziol2014-03-244-47/+0
| | | | | | | | | | | | | | | | | | | | | Bring r24864 from trunk to 1.8 branch: Remove all traces of MPI-POSIX VFD and GPFS detection/code. Remove remaining traces of stream VFD. Remove testpar/t_posix_compliant test (it's not actually verifying anything). Clean up H5D__mpio_opt_possible() further. Moved environment variable that disables MPI collective operations into MPI-IO VFD (instead of it being in src/H5S.c). A few other small code cleanups. Tested on: Mac OSX/64 10.9.2 (amazon) w/parallel & serial (daily tested on trunk)
* [svn-r24746] Merge trunk revision 24744 from cmake branch includes;Allen Byrne2014-02-2710-4/+75
| | | | | | HDFFV-8505: UD filter changes to remove filters in h5repack. Tested: local linux
* [svn-r24720] bring r24709 from trunk:Mohamad Chaarawi2014-02-182-2/+2
| | | | | | | rename H5V to H5VM since H5V is needed in the fastforward project for view objects. The addition of view objects in the fastforward project is expected to be brough into the trunk sometimes in the future, which is why we need to make this change.
* [svn-r24680] Remove acknowledgment file from install.Allen Byrne2014-02-032-592/+3
| | | | | | | Remove obsolete CPack.cmake file. Merge h5repack and h5mkgrp test folder changes from trunk. Tested: local linux
* [svn-r24654] HDFFV-8640: Remove XLATE_UTILITYAllen Byrne2014-01-282-57/+1
| | | | Update tools testfiles
* [svn-r24640] Add SUN specific block skipping.Allen Byrne2014-01-221-0/+7
| | | | Tested: emu
* [svn-r24433] Update examples package install location and text filesAllen Byrne2013-11-122-222/+248
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* [svn-r24413] Updated information on how to build examples with cmake ↵Allen Byrne2013-11-071-4/+11
| | | | installed binary.
* [svn-r24384] Add missing H5_ prefixAllen Byrne2013-10-311-3/+3
| | | | Tested: local linux
* [svn-r24259] Maintenance: Updated version number to 1.8.13-snap0; cleaned up ↵Elena Pourmal2013-10-071-1/+1
| | | | | | RELEASE.txt for new info. The 1.8 branch is open now for code changes.
* [svn-r24231] Issue 1264: CYGWIN had long double rounding problem from ↵Raymond Lu2013-09-302-10/+0
| | | | | | | | unsigned long long. Allen confirmed the problem is gone. So I took out the macro CYGWIN_ULLONG_TO_LDOUBLE_ROUND_PROBLEM. It skipped the test related to this issue. Tested with h5committest.
* [svn-r24209] Port r24171 from trunk to 1.8 branch.Neil Fortner2013-09-271-5/+0
| | | | | | | | | | | | | | | | | | | Tested: jam, koala, ostrich, platypus (h5committest) Log from r24171: Purpose: Fix problem with gcc 4.8 Description: With optimization enabled, gcc 4.8 inserts garbage into the padding bytes of floating point types when assigning from a literal constant. This caused problems when H5detect.c scanned the bits in floating point types to determine their properties. Modified H5detect.c to scan for padding before further analyzing the type, and to ignore all information in the padding areas. Also removed code that temporarily disabled optimization. Tested: jam, koala, ostrich, platypus (h5committest)
* [svn-r24206] Fix warning message from missing if in configureAllen Byrne2013-09-272-40/+46
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* [svn-r24205] Merge HDFFV-8513/8522 from trunk (via cmake branch), h5repack ↵Allen Byrne2013-09-262-0/+11
| | | | | | | | UD plugins. Also warning session fixes. Tested: CMake local linux
* [svn-r24165] Correct Info.plist settingsAllen Byrne2013-09-191-31/+26
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* [svn-r24164] Add documentation on usage.Allen Byrne2013-09-191-0/+2
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* [svn-r24112] Description:Quincey Koziol2013-09-061-2/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r24101 & 24111 from trunk to 1.8 branch: r24101: ======= Description: Clean up warnings, enable new compiler warning flag(s) and bring back changes from Coverity branch: r20813: Remove the dead code as listed for coverity bug #1722. h5committested. r20814: Issue 69: Check return value and throw error if negative return. Also free datatype id on error r20815: Use HDstrncpy. --gh r20816: Replaced one last HDstrcat call with HDstrncat to resolve coverity issue 832. r20817: Use HDstrncpy and HDstrncat. --gh r20818: Purpose: Fix valgrind issues with h5jam Description: Modified h5jam to free strings strdup'd in parse_command_line before exit. Note that they may still not be freed in case of error, due to the widespread use of exit(). r20819: Issue 80: change loop to use int as loop index. r20820: Maintenance: Fixed the bug found by coverity CID 788 There were two problems with this function: 1) it tried to unnecessary free NULL pointer 2) it tried to allocate c_name buffer that is done by H5Pget_class_name r24111: ======= Description: Restrict GCC diagnostic pragmas to only gcc 4.6+ Tested on: Mac OSX 10.8.4 (amazon) w/gcc 4.8.1, C++ & FORTRAN (too minor to require h5committest)
* [svn-r24024] JAVA-1714: CMake packaging for macs improvedAllen Byrne2013-08-194-1/+164
| | | | | | | HDFFV-7989: h5dump any_path and help text grouping Added cygwin-64 support Merged from trunk, tested local linux
* [svn-r24018] Bug fix: HDFFV-8500Albert Cheng2013-08-171-0/+5
| | | | | | | | | | | The new gcc v4.8.* compilers does not work well with dt_arith which failed in production mode. Solution: A temporary patch by removing any optimization (-O*) from the PROD_CFLAGS so that dt_arith will pass for now. A more through investigation is needed. Tested: Jam, platypus and Koala where it failed and now passes.
* [svn-r24009] Remove check for GetConsoleScreenBuffer in CYGWIN (false positive).Allen Byrne2013-08-141-2/+6
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* [svn-r23869] HDFFV-8302: replace (v)snprintf with _(v)snprintf for windows. ↵Allen Byrne2013-07-083-2/+115
| | | | | | | | Merge from trunk along with other windows functions and HD prefix corrections. HDFFV-8394: Add cmake code to package examples Tested: local linux
* [svn-r23787] Remove COMPILE_FLAGS value - already set in X_FLAGSAllen Byrne2013-06-171-1/+1
| | | | Add /MT support
* [svn-r23785] Remove ignored FLAGS options for VS platforms.Allen Byrne2013-06-171-3/+3
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* [svn-r23771] HDFFV-8434,-8437,-8445,-8447,-8461: Merge changes from Trunk.Allen Byrne2013-06-143-14/+104
| | | | Tested: local linux
* [svn-r23687] Bug fix: HDFFV-8435Albert Cheng2013-05-091-2/+2
| | | | | | | | | | | | | | | | | | | | | | | | | Need to update libtool version number for v1.8.11 since two functions, H5Pget_dxpl_multi and H5Pset_dxpl_multi were removed. Then v1.8 is now v1.8.12-xxx and needed an update to. config/lt_vers.am: libtool information is changed to 8.0.1 because it is a revision different from v1.8.10. configure: src/Makefile.in: hl/src/Makefile.in: hl/c++/src/Makefile.in: hl/fortran/src/Makefile.in: c++/src/Makefile.in: fortran/src/Makefile.in: README.txt: autogenerated by bin/reconfiure. Tested: h5committest, then visual inspect that the libhdf5.so.x.y.z is changed accordingly. Built in duck by hand and see it changes to libhdf5.8.dylib too.
* [svn-r23654] Add parallel references to cmake config filesAllen Byrne2013-04-292-2/+18
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* [svn-r23610] Improvement: DFFV-8245Albert Cheng2013-04-221-4/+44
| | | | | | | | | | | | | | | Use Clang as the compiler for the Mac platform. Changed all Mac to use clang/clang++ as the default C and CXX compilers if not provided by the user. Still use gfortran as the default fortran compiler since Apple does not provide any fortran compiler. HDFFV-8245: bug fix. Snow Leopard (darwin 10.X) does not have clang++. Reversed it to use gcc/g++ as the default C and CXX compilers for Darwin 10.X systems. Tested: h5committest plus duck (darwin 11), wren (darwin 12) and fred (darwin 10).
* [svn-r23592] Description:Quincey Koziol2013-04-151-6/+77
| | | | | | | | | Bring r23584 from trunk to 1.8 branch: Update with new compiler warnings for gcc 4.8.x Tested on: Mac OSX/64 10.8.3 (amazon) w/gcc 4.8.0
* [svn-r23573] Removed inappropriate executable properties from a few files. ↵Dana Robinson2013-04-105-0/+0
| | | | | | | | These are often added by Windows text editors. Tested on: jam (just tested to make sure it builds - no code changes)
* [svn-r23567] Post v1.8.11 branch-off, changed version to 1.8.12-snap0.Albert Cheng2013-04-091-1/+1
| | | | | | Reset RELEASE.txt for next release (1.8.12). Tested: h5committest.
* [svn-r23510] I merged the changes for DESY project from the trunk (r23496) ↵Raymond Lu2013-04-012-0/+8
| | | | | | into this 1.8 DESY branch. Tested with h5committest (duck failed with CMake because I don't know how to change test/CMakeLists.txt. I'll wait for Allen to do it).
* [svn-r23318] HDFFV-8311: Improve tools testing and eliminate dependency problemsAllen Byrne2013-02-251-5/+5
| | | | Tested: local linux
* [svn-r23301] Allen Byrne2013-02-184-85/+16
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* [svn-r23261] Brought r23235 from trunk into branch.Scot Breitenfeld2013-02-131-6/+4
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* [svn-r23211] Merge trunk CMake changes for minimum cmake version of 2.8.10. ↵Allen Byrne2013-01-312-0/+5
| | | | | | This was prompted by HDFFV-8227, OS X requires latest version of cmake for proper support. Tested: local linux
* [svn-r23142] Purpose:Dana Robinson2013-01-082-1/+9
| | | | | | | | | | | Merged 23111 from the trunk. (Core VFD and Mac OS X I/O changes) Tested on: 64-bit Windows 7, Visual Studio 2010, CMake 64-bit Mac OS X Snow Leopard (Fred), Fortran, C++ 64-bit BE Linux (Ostrich), Fortran, C++ 32-bit LE LInux (jam), Fortran, C++ (also parallel w/ Fortran)
* [svn-r23141] Only do line by line compare if compare files fail. Allen Byrne2013-01-072-0/+18
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