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* Remove F2003 Option and referencesAllen Byrne2019-02-063-12/+0
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* Remove obsolete fileAllen Byrne2019-02-061-106/+0
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* Update examples versionAllen Byrne2019-02-061-1/+1
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* Update to example reference versionAllen Byrne2019-02-063-3/+3
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* Fail configure if SZIP/ZLIB is requested but not foundAllen Byrne2019-02-051-1/+5
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* Add LOCAL_BATCH_SCRIPT_ARG variable for submitting account informationLarry Knox2019-02-041-4/+4
| | | | and other batch command variations with ctest command.
* Merge branch 'develop' of ↵Larry Knox2019-02-042-2/+9
|\ | | | | | | https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into develop
| * Merge pull request #1517 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2019-02-032-13/+27
| |\ | | | | | | | | | | | | | | | | | | | | | * commit 'c348d453b583ec9092152e6aef1f7fa9854cf5d9': Correct H5DIFF to PH5DIFF in *ctestS.sl.in.cmake list of parallel tests reserved for *ctestP.sl.cmake. Revise options to run batch tests and alternative options for cross compile in HPC/*-HDF5options.cmake. Change examples file to zip for CMake zip file. Update bin/release for filename changes and HPC-CMake tar file corrections. Add new files to MANIFEST. Update permissions for raybsub to 755.
| * \ Merge pull request #1515 in HDFFV/hdf5 from ↵Dana Robinson2019-02-012-2/+9
| |\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:pread_vfd_squash to develop * commit '055208b71c573be3d4b1047b840d4d8b255bc25e': Minor tweak to CMake preadwrite entry. Updated sec2, log, and core VFDs to use pread/pwrite when available (can be controlled via a configure/CMake option)
| | * | Updated sec2, log, and core VFDs to use pread/pwrite whenDana Robinson2019-01-312-2/+9
| | | | | | | | | | | | | | | | available (can be controlled via a configure/CMake option)
* | | | Add batchscript options that work when running ctest directly.Larry Knox2019-02-043-5/+9
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* | | Correct H5DIFF to PH5DIFF in *ctestS.sl.in.cmake list of parallel testsLarry Knox2019-02-022-13/+27
|/ / | | | | | | | | | | reserved for *ctestP.sl.cmake. Revise options to run batch tests and alternative options for cross compile in HPC/*-HDF5options.cmake.
* | Add more specific batch scripts.Larry Knox2019-01-311-2/+10
| | | | | | | | | | | | Add script raybsub to handle submitting .lsf files on ray with bsub < script.lsf syntax that we couldn't handle with CMake. Add hpc-cmake-tgz option for bin/release.
* | Merge branch 'develop' of ↵Larry Knox2019-01-281-1/+1
|\ \ | |/ | | | | https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into develop
| * Revert build name settingAllen Byrne2019-01-271-1/+1
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* | Add HDF5options.cmake files for serial and parallel tests on HPCLarry Knox2019-01-282-0/+234
|/ | | | | | | machines (where tests are to be run as batch jobs. Add README_HPC file with instructions for setting up configuration to use batch scripts for running tests on HPC machines and some pointers for cross compiling.
* Fix CMake on WindowsAllen Byrne2019-01-251-1/+1
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* CMake fixAllen Byrne2019-01-241-1/+1
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* Java html fix and cmake updateAllen Byrne2019-01-241-2/+2
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* Update CMakeAllen Byrne2019-01-233-5/+9
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* Add clear objects to ignore testsAllen Byrne2019-01-221-1/+1
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* Add clear objects to ignore testsAllen Byrne2019-01-221-1/+5
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* Add new clear tests to ignore listAllen Byrne2019-01-221-0/+5
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* Cleanup variable namesAllen Byrne2019-01-221-2/+2
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* HDFFV-10685 Correct syntaxAllen Byrne2019-01-221-0/+1
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* HDFFV-10685 Corrected versionAllen Byrne2019-01-221-1/+3
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* HDFFV-10685 Always set Mac version flags - use soversionAllen Byrne2019-01-221-3/+4
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* MPI vars need passed in, change to grepTestAllen Byrne2019-01-202-326/+1
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* Add parrallel runTest.cmake for ph5exampleAllen Byrne2019-01-181-0/+325
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* Fix CMake policy 54 warningsAllen Byrne2019-01-184-29/+29
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* TRILABS-105 Fix CMake policy 54 warningsAllen Byrne2019-01-181-22/+22
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* Correct fix for new policyAllen Byrne2019-01-141-1/+1
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* Fix for new policyAllen Byrne2019-01-141-1/+1
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* Merge pull request #1450 in HDFFV/hdf5 from ↵Ray Lu2019-01-083-0/+32
|\ | | | | | | | | | | | | | | | | ~SONGYULU/hdf5_ray:TRILAB-98-dt_arith-and-cpp_testhdf5-tests to develop * commit 'b02de315b93ac29d2483a91d526b110a25073505': NNSA Tri-LabsTRILAB-98: Another two test cases out. NNSA Tri-Labs TRILAB-98: Taking out a few more test cases. NNSA Tri-Labs TRILAB-98 dt_arith and cpp_testhdf5 tests fail on sierra.llnl.gov: According to the group decision, simply provide a macro to disable some failing test cases on sierra (IBM power9 cpu). All failing cases involve long double data type.
| * NNSA Tri-Labs TRILAB-98 dt_arith and cpp_testhdf5 tests fail on ↵Songyu Lu2019-01-083-0/+32
| | | | | | | | sierra.llnl.gov: According to the group decision, simply provide a macro to disable some failing test cases on sierra (IBM power9 cpu). All failing cases involve long double data type.
* | Add missing define created in configure.acAllen Byrne2019-01-081-0/+3
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* | HDFFV-10443: Add "field" parameter to H5Oinfo* and H5Ovisit* APIs.Scot Breitenfeld2019-01-081-0/+1
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* | Add variables to set up module switch between configure and build forLarry Knox2019-01-081-0/+9
| | | | | | | | cross compiling on CrayXC40.
* | Merge branch 'develop' of ↵Larry Knox2019-01-059-88/+102
|\ \ | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into develop
| * \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Larry Knox2019-01-059-88/+102
| |\ \ | | |/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '0e34f0feaaeb6d2286f87f695f25fae45c070a42': (26 commits) HDFFV-10664 update reference file HDFFV-10664 update reference files HDFFV-10664 add missing function and check for restriction Remove "bad" statements at end of TEST_ERROR. Formerly arguments to FAIL_PUTS_ERROR Add RELEASE.txt entry for HDFFV-10596. Add semicolon at end of TEST_ERROR() invocation for consistency. Uninstall should remove the libhdf5_hl_fortran links. Add symlinks named libhdf5_hl_fortran* to libhdf5hl_fortran in Makefile.am to match cmake install and the name pattern for other hl lib files. Change FAIL_PUTS_ERROR to TEST_ERROR. Cleaned up the parallel flush test and set t_pflush1 to always fail. Also set CMake to handle this. Update calls: H5Dcreate to H5Dcreate2, H5Acreate to H5Acreate2. Removed a comment. Fix comment Align H5Lcreate_ud behavior with documentation for NULL udata pointer Update toolchain comment Use c99 standard cmake variable Add PGI toolchain Correction based on code review. HDFFV-10664 add check for state before set call HDFFV-10546 refactor variable name ...
| | * Fix commentAllen Byrne2019-01-031-1/+2
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| | * Update toolchain commentAllen Byrne2019-01-033-1/+4
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| | * Use c99 standard cmake variableAllen Byrne2019-01-021-3/+3
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| | * Add PGI toolchainAllen Byrne2019-01-021-0/+10
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| | * HDFFV-10546 refactor variable nameAllen Byrne2019-01-024-83/+83
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* | | Configure build directory in batch scripts.Larry Knox2019-01-051-2/+2
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* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Larry Knox2019-01-029-250/+253
|\ \ | |/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'af21ce90d9465e805807f17da21f93e64e03492a': (46 commits) Changed to Unix line endings and chmod -x. Fix runtest case for data to stdout in tool Updated the parallel install docs. Eliminated the need for a separate script variable. Flipped swapped testing strings. Specify variable type. Remove unnecessary whitespace. Added test_vol_plugin.sh to the list of scripts to clean Fixed a CMake build issue (CMake still doesn't run the VOL plugin tests) Added more sub-tests to the VOL plugin test. Added a simple test for registration of VOL connector plugins. Autotools only for right now, but this will be fleshed out in future work. OHDR tests now accept h5_fileaccess() fapls. Formatting, informative comments, and minor renaming. Fix some CMake listings Add error checking to the minimized dset header size calculation. Update printf->HDprintf statements. Remove `#if 0` block of deprecated code. Fix mistake with H5E_BEGIN_TRY {...} H5E_END_TRY block containing ERROR-raising macros. Formatting tweaks. Added a helpful message to the flush script. Added a shell script so we can run the parallel flush test on OpenMPI. Add "compact" storage test to relative header size comparisons. Formatting adjustments. Formatting adjustments ...
| * Changed to Unix line endings and chmod -x.Dana Robinson2019-01-017-245/+245
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| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-12-311-1/+1
| |\ | | | | | | | | | | | | | | | | | | | | | * commit 'b30a1fe44aa804a67f2291005bf8135ac5c2dc99': Updated the parallel install docs. Eliminated the need for a separate script variable. Added a helpful message to the flush script. Added a shell script so we can run the parallel flush test on OpenMPI.
| | * Merge branch 'develop' into openmpi_tweaksDana Robinson2018-12-314-13/+76
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