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* [svn-r19470] Bug fix: 1961-- AIX 6.1 --enable-share did not work.Albert Cheng2010-09-221-0/+3
| | | | | | | | | | | | | | | | | | Description: In an AIX 6.1 system, configure --enable-shared could not build a shared HDF5 library. The problem was because the version of config.guess was too old to recongnize AIX 6.X and also configure.in had a local fix which did not recognize AIX 6.X. Solution: 1. Mike McGreevy updated bin/config.guess to handle AIX 6.X. 2 Albert fixed configure.in to recognize AIX 6.X. Note that though HDF5 can build shared lib for AIX 6.X systems but it still could not install the proper library as in AIX 5.X systems. Also, bin/config.sub should be updated too. Tested: BP which is the AIX 6.1 system that exposed this problem.
* [svn-r19366] Updated autoconf to version 2.6.7, libtool to version 2.2.10, ↵Larry Knox2010-09-101-0/+1
| | | | | | and m4 to version 1.4.14. Also added m4 directory for m4 macros according to autoconf suggestion. Tested with h5committest on amani, jam, and heiwa, and on linew.
* [svn-r19205] Bug 1917: post cleanup.Albert Cheng2010-08-091-2/+2
| | | | | | | | | | fseek64 was used to support large file access for the STDIO driver back in version 1.2.2 in year 2000. Some how it was not included in version 1.4.0. Now, fseeko64 is used to support large file. There is no more need for fseek64 which is not a standard call. Removed its presence from configure and related files. Tested: jam for configure only.
* [svn-r19185] Bug fix: ID 1917Albert Cheng2010-08-061-3/+3
| | | | | | | | In some machine (Linux), when --disable-largefile is used, it claims it has fseeko64 but off64_t is NOT supported. Moved the test of fseeko64 and ftello64 to where fseek64 is so that they are tested only if off64_t is supported. Tested: h5committested.
* [svn-r19160] Added the tests for fseeko64 and ftello64 which will be used by ↵Albert Cheng2010-07-301-1/+1
| | | | | | | | | the STDIO VFD if they are available. Tested: jam only since it was tests for two new functions that are not used by the code yet.
* [svn-r19086] Snapshot version 1.9 release 74HDF Tester2010-07-181-1/+1
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* [svn-r19068] Bug fix: ID 1921 change mpirun to mpiexecAlbert Cheng2010-07-141-54/+0
| | | | | | | | | | | Removed the recognition of parallel compilers of LAM (hcc) and ChMPIon (cmpicc) since we have no access to these two MPI implementations and decided not to support them any more. Test: Jam using parallel tests: 1. use CC=mpicc and confirmed it is recognized as a parallel compiler; 2. use CC=hcc and confirmed it is NOT recognized as a parallel compiler any more.
* [svn-r19064] Snapshot version 1.9 release 73HDF Tester2010-07-111-1/+1
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* [svn-r19059] Brought changes from hdf5_1_8 to add version information for ↵Larry Knox2010-07-091-3/+47
| | | | | | fortran and c++ compilers in libhdf5.settings file and configure output (r18836), to install examples as part of make install (r18680), and to provide scripts to compile and run the examples after they are installed (r18817). Tested with new/h5committest on amani, heiwa, and jam.
* [svn-r19047] Snapshot version 1.9 release 72HDF Tester2010-07-041-1/+1
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* [svn-r19031] Snapshot version 1.9 release 71HDF Tester2010-06-281-1/+1
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* [svn-r19022] Snapshot version 1.9 release 70HDF Tester2010-06-201-1/+1
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* [svn-r18992] Bug Fix: (ID 1921)Albert Cheng2010-06-111-19/+19
| | | | | | | | | | | | PHDF5 changed to use "mpiexec", instead of mpirun, as the default MPI applications startup command as defined in the MPI-2 definition, section 4.1. Note that only mpich related (using mpicc command) definitions are changed to mpiexec. Other favors like hcc, AIX, champion, are not changed since I don't have a way to verify them yet. Tested: jam and amani, using both current and new mpich. Did not h5committested since this affects PHDF5 configure only.
* [svn-r18976] Added comments regarding the -D_POSIX_SOURCE flag including a ↵Larry Knox2010-06-041-1/+12
| | | | | | reference to a discussion of the _POSIX_SOURCE, BSD_SOURCE, and _POSIX_C_SOURCE Macros and their intersaction at http://www.gnu.org/s/libc/manual/html_node/Feature-Test-Macros.html. Comment text only - not tested.
* [svn-r18823] Snapshot version 1.9 release 69HDF Tester2010-05-161-1/+1
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* [svn-r18709] Purpose:Mike McGreevy2010-05-051-35/+100
| | | | | | | | | | | | | | | | | | | | | | | | | Improve configure's large-file support control. Description: Modified configure to now attempt to add defines necessary for supporting largefiles on all systems, instead of solely on linux. This is in response to user requests to enable largefile support on Solaris by default, as well as to give extra control on AIX (instead of just jamming the necessary flag into the config files). The old --enable-linux-lfs flag has been removed in favor of the --enable-largefile flag (enabled by default), which can be used on all platforms. On systems where large files cannot be supported in this manner, configure will report as such. Tested: h5committest AIX (NCSA's blue_print machine) duty, liberty, and linew.
* [svn-r18684] Snapshot version 1.9 release 68HDF Tester2010-05-021-1/+1
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* [svn-r18659] Bug: 1764Albert Cheng2010-04-281-2/+3
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: longjmp do not necessary restore signal that is blocked during the signal handling. This caused the Alignment test to fail quietly, resulting in wrong alignment information which will cause failures later. Solution: One can use sigsetjmp/siglongjmp to restore signal handling but not all systems such as Cray XT or VMS supports sigsetjmp. Backup solution is to use sigprocmask to reset the signal. Again, some systems may not support it either. Added code to try the first and then the second solution. Also added tests to verify if the signal_handler routines are working properly. Finally, added code to print results of the verification (in form of comments) to H5Tinit.c for inspection in case of failure. (Note that many platforms do not have alignment limits at all and ALIGNMNET code never raise the SIGBUS or SIGSEGV errors. In those cases, it does not matter whether the signal handlers work or not. Again, this can be deduced from the results comments near the end of the H5Tinit.c. If the sum of signal handlers called equals the total of verify, it means ALIGNMENT does not raise any signals.) For configure.in and configure: Added the test for setjmp, sigsetjmp, sigprocmask which are used by the H5detec.c. Tested: htcommittested, jam(serial).
* [svn-r18648] In H5T_get_native_type of H5Tnative.c, I changed the way that ↵Raymond Lu2010-04-271-0/+3
| | | | | | | | | the offset, alignment, and size of nested compound type are calculated by using H5T_cmp_offset. The old way had a bug in it (see bug #1850). Tested on jam. I tested the same change for 1.8 on amani, linew, and jam.
* [svn-r18634] Description:Quincey Koziol2010-04-271-0/+2
| | | | | | | | | | | | | | | | | | | | | Clean up compiler warnings. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18589] Snapshot version 1.9 release 67HDF Tester2010-04-181-1/+1
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* [svn-r18545] Snapshot version 1.9 release 66HDF Tester2010-04-111-1/+1
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* [svn-r18508] Snapshot version 1.9 release 65HDF Tester2010-04-041-1/+1
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* [svn-r18465] Snapshot version 1.9 release 64HDF Tester2010-03-281-1/+1
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* [svn-r18432] Snapshot version 1.9 release 63HDF Tester2010-03-211-1/+1
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* [svn-r18420] Description:Quincey Koziol2010-03-181-2/+0
| | | | | | | | | Re-run bin/reconfigure to catch up with recent rearrangements, remove some unused srcdir headers and duplicated code in main test header. Tested on: Mac OS X/32 10.6.2 (amazon) w/debug & prod Linux/32 2.6 (jam)
* [svn-r18419] Description:Quincey Koziol2010-03-181-6/+5
| | | | | | | | | Clean up srcdir querying code more, extracting it into single header file, to avoid compiler warnings. Tested on: Mac OS X/32 10.6.2 (amazon) w/debug & prod Linux/32 2.6 (jam)
* [svn-r18413] Description:Quincey Koziol2010-03-171-0/+6
| | | | | | | | | | | | | | Unify srcdir handling for test executables and allow them to use the srcdir setting from configure time without requiring the 'srcdir' environment variable be set (although you still can, to override the built in setting). Attempted to get this right for Windows builds also. Also add dependency between src/H5Tinit.c and src/libhdf5.settings, so that the test/testcheck_version.sh script works correctly. Tested on: Linux/32 2.6 (jam) Mac OS X/32 10.6.2 (amazon)
* [svn-r18406] Snapshot version 1.9 release 62HDF Tester2010-03-141-1/+1
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* [svn-r18350] Snapshot version 1.9 release 61HDF Tester2010-02-281-1/+1
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* [svn-r18217] Snapshot version 1.9 release 60HDF Tester2010-02-071-1/+1
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* [svn-r18199] Snapshot version 1.9 release 59HDF Tester2010-01-311-1/+1
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* [svn-r18120] Snapshot version 1.9 release 58HDF Tester2010-01-171-1/+1
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* [svn-r18100] SnapshotHDF Tester2010-01-101-1/+1
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* [svn-r18059] SnapshotHDF Tester2010-01-031-1/+1
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* [svn-r18047] SnapshotHDF Tester2009-12-201-1/+1
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* [svn-r18012] SnapshotHDF Tester2009-12-131-1/+1
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* [svn-r17973] SnapshotHDF Tester2009-12-071-1/+1
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* [svn-r17939] Description:Quincey Koziol2009-12-011-1/+2
| | | | | | | | | | | | | | | | | | | | | | | Handle external links from symlinked files by adding another check to look for "child" files for links from the actual location of the "parent" file, instead of from the location of the symlink. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.2 (amazon) in debug mode Mac OS X/32 10.6.2 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r17924] Description:Quincey Koziol2009-11-231-6/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Add detection for POSIX lstat() routine to configure script (mostly for non-UNIX/Linux machines) and add macro wrapper for it. Alphabetatize the system/library calls we test for, to make them easier to read. Removed the sigaction() detection & macro wrappers, since it's not used by the distribution currently. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.2 (amazon) in debug mode Mac OS X/32 10.6.2 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r17902] SnapshotHDF Tester2009-11-171-1/+1
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* [svn-r17742] Snapshot version 1.9 release 50HDF Tester2009-10-251-1/+1
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* [svn-r17724] Merge change from 1.8 branch to trunk that removes ↵Larry Knox2009-10-221-1/+1
| | | | | | -D_POSIX_SOURCE from CPPFLAGS in h5cc. Tested: amani, jam, linew (h5committest).
* [svn-r17675] Purpose:Mike McGreevy2009-10-191-6/+23
| | | | | | | | | | | | | Configure Cleanup Description: Make all AM_CFLAGS visible in CFLAGS during configure so all checks have full visibility of any set flags. Tested: h5committest
* [svn-r17670] Snapshot version 1.9 release 49Larry Knox2009-10-181-1/+1
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* [svn-r17663] Purpose:Mike McGreevy2009-10-161-230/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | configure cleanup Description 1. Removed check that disables shared libraries when pgcc is used. Apparently they previously did not work with libtool 1.5.14 and on mir, neither of which is in use anymore. Testing on jam and amani appear fine, so this check is unnecessary. 2. Removed check that disables shared C++ libraries when -xarch is used to enable 64 bit mode. We now use m64 flag to build 64 bit binaries, so we shouldn't explicitly disable shared C++ libraries if -xarch is discovered. 3. Removed old configure output summary section from configure.in, since we now use the libhdf5.settings file. 4. Updated powerpc-ibm-aix5.x config file to once again put c99 flag into H5_CFLAGS (and thus NOT get into h5cc), as decided in our dev meeting. Tested: h5committest full build with pgcc on jam / amani
* [svn-r17654] Purpose:Mike McGreevy2009-10-151-25/+25
| | | | | | | | | | | | Configure cache-val cleanup Description: Corrected some misnamed cache values in configure / config files. Tested: h5committest
* [svn-r17647] Maintenance: Configure didn't cleanup Fortran module file; fixed.Elena Pourmal2009-10-151-1/+1
| | | | | | | Platforms tested: jam (trivial change) Note: Most of the Fortran compilers create module files with "mod" extension. In the past, I believe, there were systems (Cray?) that used different extensions. We should add those to the current fix when we find them.
* [svn-r17643] Purpose:Mike McGreevy2009-10-141-35/+33
| | | | | | | | | | | | | | | | | | | Configure / Config File Fixes Description: 1. Made AM_CPPFLAGS assignments in configure a bit safer. (i.e., check to ensure include paths exist before adding them to AM_CPPFLAGS). 2. Change AIX config file to add -D_LARGE_FILES into AM_CXXFLAGS instead of H5_CXXFLAGS (same with *_CFLAGS). This will propagate it into h5c++, where it is needed to compile correctly. 3. Added missing line containing AM_CFLAGS to configure output summary. Tested: h5committest, and uP (AIX machine, via Albert).
* [svn-r17639] Purpose:Mike McGreevy2009-10-131-1/+7
| | | | | | | | | | | | | | | | | | | | | | | | | | Configure Fix Description: uP (AIX Machine) was failing because configure needs to see -k flag in FCFLAGS for some checks to behave as intended. Since the config files were switched to passing all flags into H5_FCCFLAGS, this broke this behavior. To allow configure to see this again, FCFLAGS and all other user flags are saved before doing anything, and restored at the end of configure, so if needed we can set these values in configure and/or the config/ files without (permanently) overriding or changing anything a user sets. Also modified the powerpc-ibm-aix5.x config file to once again put -k into FCFLAGS in addition to H5_FCFLAGS (the former of which will be restored after configure completes the checks). Tested: h5committest (jam and amani finished, linew still running, though I wanted to get this in for daily tests since it needs to be run on uP for final verification).
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