| Commit message (Collapse) | Author | Age | Files | Lines |
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Description:
All HDF5 user documentation has been moved to a separate hdf5doc/
repository, managed under Subversion.
With this 'cvs commit', all files are stripped from hdf5/doc/.
THIS CHANGE IS APPLIED ONLY TO THE HDF5 DEVELOPMENT BRANCH,
post Release 1.6.x; it is not applied to the release branches.
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Purpose:
Added links to HDF5 High-Level API reference pages to nav bar.
Platforms tested:
Firefox
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Description: See details from Bug #213. Family member file size wasn't saved
anywhere in file. When family file is opened, the first member size determine
the member size.
Solution: Hopefully, this is the last step of checkin for this stage. This step
mainly enables h5repart tool to be able to convert file driver from family to
sec2. Because the library saves family information in file, in trying to convert
to sec2 driver, the library simply change the address of driver information to
undefined so that the driver information block can be ignored. This step also
updates the reference manual of H5Pset_fapl_family() and h5repart.
In the fifth step of checkin, backward compatibility with v1.6
is tested. A family file created was created with the v1.6 library and opened
with this version of the library.
In the fourth step of checkin, a test suit is added for h5repart,
including a program to generate the test files, a script file to run h5repart,
and a program to verify repartitioned files can be opened by the library.
There's a change from the first step of checkin. Family name template is no
longer saved in the superblock because different pathname can make the name
different.
In the third step of checkin, h5repart has been modified. If h5repart is used
to change the size of family member file, the new size(actual member size) is saved
in the superblock.
In the second step of checkin, multi driver is checked against the driver
name saved in superblock. Wrong driver will result in a failure with an error message
indicating
multi driver should be used. This change includes split driver because it's a special
case for multi
driver.
In the first step of checkin. Family member size and name template(unused at this stage) are saved
in file superblock. When file is reopened,the size passed in thrin superblock. A different size
will trigger a failure with an error message indicating the right size. Wrong driver to open family
file will cause a failure, too.
Platforms tested: h5committest and fuss.
Misc. update: doc/html/RM_H5P.html and doc/html/Tools.html
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Added H5Pset/get_data_transform
These are initial entries; they need technical review.
Removed several deprecated functions that have been commented out
through several release cycles (H5Pget_deflate and
H5Pset/get_compression) and several lines of no-longer-used
template code.
Minor formatting changes.
Platforms tested:
Mozilla
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Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-)
Description:
Generally speaking, this is the "signed->unsigned" change to selections.
However, in the process of merging code back, things got stickier and stickier
until I ended up doing a big "sync the two branches up" operation. So... I
brought back all the "infrastructure" fixes from the development branch to the
release branch (which I think were actually making some improvement in
performance) as well as fixed several bugs which had been fixed in one branch,
but not the other.
I've also tagged the repository before making this checkin with the label
"before_signed_unsigned_changes".
Platforms tested:
FreeBSD 4.10 (sleipnir) w/parallel & fphdf5
FreeBSD 4.10 (sleipnir) w/threadsafe
FreeBSD 4.10 (sleipnir) w/backward compatibility
Solaris 2.7 (arabica) w/"purify options"
Solaris 2.8 (sol) w/FORTRAN & C++
AIX 5.x (copper) w/parallel & FORTRAN
IRIX64 6.5 (modi4) w/FORTRAN
Linux 2.4 (heping) w/FORTRAN & C++
Misc. update:
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Copy edits, primarily to correct several spelling errors.
Platforms tested:
Mozilla
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Bugfixes in H5Pget/set_fclose_degree
Clarification in H5Pset_filter
Description:
H5Pget_fclose_degree and H5Pset_fclose_degree
Functions index at top of page:
Move H5Pget/set_fclose_degree into "File Access Properties."
Remove "File Close Properties" section.
H5Pget_fclose_degree -- Correct parameter description.
(Contribute to closing Bugzilla entries 188 and 190.)
H5Pset_filter -- Clarification of terms
Other minor formatting and copy edits.
Platforms tested:
Mozilla
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Purpose:
H5Pset_fapl_multi -- syntax has changed in (one parameter datatype)
Platforms tested:
Mozilla
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Purpose:
Revise H5Premove_filter
H5Pset_chunk bug fix
Correct H5Premove signature
Formatting fix
Description:
H5Premove_filter -- editorial and technical revisions
replaced F90 description
H5Pset_chunk -- specified units of chunk size as "dataset elements"
fixes Bugzilla #110
H5Premove -- corrected signature, removing duplicate mention of parameters
Corrected "electronic versus print" formatting error in functions index
Platforms tested:
Mozilla
Misc. update:
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Purpose: Maintenance
Description: H5_SZIP_CHIP_OPTION_MASK was deleted from the list
of the available parameters for the H5Pset_szip function.
Solution: Updated Fortran source, tests and documentation
to reflect this change.
Platforms tested: arabica (too small for h5committest)
Misc. update:
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Purpose:
To more carefully describe the
-- behavior of H5Pset_external
-- appropriate usage of H5Pset_shuffle
Description:
H5Pset_external
Add notes that first H5Pset_external call sets the dataset as EXTERNAL
and identifies the first file in the series of external files that
will hold the dataset; subsequent calls identify additional files;
all external files must be declared before the dataset is created;
and the library will create files that don't yet exist on the system
at the time that H5Dwrite is called to write data to that file.
H5Pset_shuffle
Added notes regarding usage of H5Pset_shuffle in concert with a
compression filter.
And, as always, a few copy edits.
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Correct typo in H5Pcreate() information
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Purpose:
Bugfix: Bugzilla #66
Solution:
H5Pset_szip -- Corrected the plist parameter description.
Since this property can be set only in the dataset
creation property list, changed the parameter description
from
Dataset creation or dataset transfer property list identifier.
to
Dataset creation property list identifier.
Fixes Bugzilla bug #66.
Platforms tested:
IE 5
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Purpose:
Clean up RM formatting.
Modify RM HTML code to facilitate automated generation of PDF version.
Minor edits.
Description:
Reworked format of "Parameters" sections.
Added HTML tags (and pseudo-HTML tags) used by HTMLdoc to
generate PDF files.
Fixed the "Copyright" link on RM_H5Front.html.
Other minor copy edits.
Platforms tested:
IE 5
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introduced the constant H5Z_FILTER_ALL, used to remove all filters in H5Premove_filter
Description:
Solution:
Platforms tested:
linux
Misc. update:
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Purpose:
replaced name of delete filter with remove filter for the new function H5Premove_filter
Description:
Solution:
Platforms tested:
linux
Misc. update:
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Updated with valid values for 'filter' parameter for new H5Pdelete_filter
routine.
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Code cleanup
Description:
Add C++ and FORTRAN wrappers for new H5Pdelete_filter routine, along with
documentation and a note in the release notes.
Platforms tested:
FreeBSD 4.9 (sleipnir)
Linux 2.4 (verbena) w/ C++ and FORTRAN
Too minor for full h5committest
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Purpose:
Correct H5Pget_edc_check return values
Platforms tested:
Safari, IE 5
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Bug fix
Description:
When two property lists are compared, the H5Pequal routine was just
comparing the raw information for the property values. This causes problems
when the raw information contains pointers to other information.
Solution:
Allow a 'compare' callback to be registered for properties, so that a user
application get perform the comparison itself, allowing for "deep" compares of
the property value.
This was exported to the H5Pregister & H5Pinsert routines in the development
branch, but not the release branch.
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
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Purpose:
Updated footers to "Describes HDF5 Release 1.7, the unreleased
development branch; working toward HDF5 Release 1.8.0"
Platforms tested:
IE 5, Safari
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Description:
Integrate Fortran90 function descriptions
Remove "Non-C APIs" sections; add "Fortran90 Interface" sections
Remove note that Fortran APIs are described in a separate window
Add h5pset/get_fapl_mpiposix_f
Reinstate H5Pget_hyper_vector_size (previously removed in error)
Remove H5Pget_hyper_cache (function deprecated in 1.6, removed in 1.8)
Minor copy edits and formatting
Platforms tested:
IE 5, Safari
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Purpose:
Alphabetic sort of RM function entries
Additional and modified HTML coding to accomodate HTMLdoc and
automated PDF generation
Minor copy edits
Platforms tested:
Safari, IE 5
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Correct information
Description:
Correct a some information about file creation properties.
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Version update
Description:
Removed 1.4 compatibility code in the library.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
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Purpose:
Changed "HDF5 User's Guide" links (in navigation bars, primarily)
to point to new user's guide, which will reside for a while yet on
the HDF server.
The old user's guide will still go out with the distribution under
the label "HDF5 User's Guide, Release 1.4.5."
Platforms tested:
IE 5
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Purpose:
Linking in additional Fortran90 functions
Description:
Add links to
In RM_H5T.html
h5tarray_create_f, h5tget_array_ndims_f, h5tget_array_dims_f
In RM_H5P.html
h5pmodify_filter_f, h5pget_filter_by_id_f, h5pset_family_offset_f
h5pset(get)_fapl_core_f, h5pset(get)_fapl_family_f
h5pset(get)_fapl_multi_f, h5pset_fapl_sec2_f, h5pset_fapl_sdio_f
h5pset_fapl_split_f, h5pget_driver_f, h5pset_szip_f
h5pget_nfilters_f, h5pset(get)_preserve_f
Platforms tested:
IE 5
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Description:
H5Pset_szip -- Added link to further SZIP information at
http://hdf.ncsa.uiuc.edu/HDF5/doc_resource/SZIP/
Platforms tested:
IE 5
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Purpose:
Add short copyright notice.
Update release tag line.
Description:
Added short copyright notice as comment in source files;
does not display in browser.
Updated release tag line in footers to read as follows:
Describes HDF5 Release 1.6.0, July 2003
Platforms tested:
IE 5
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Purpose:
H5Pset/get_hyper_cache are deprecated in R 1..6.0.
Description:
Added notation that H5Pset/get_hyper_cache are deprecated functions
in R1.6.0 and are available only if library is configured for
1.4 compatibility.
Platforms tested:
IE 5
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Purpose:
Bugfix
Description:
H5Pget_filter_by_id: Changed last parameter
from "char *name[]" to "char name[]".
Platforms tested:
IE 5
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Purpose:
H5Pset_shuffle -- Add note regarding intended use.
H5Pset_szip -- Correct options mask list. Copy edits.
Description:
H5Pset_shuffle -- Added note that the shuffle filter is designed to be
used with in combination a compression filter.
H5Pset_szip -- Changed 'szip' to 'SZIP' in running text.
Removed RAW_OPTIONS_MASK, LSB_OPTIONS_MASK, and MSB-OPTIONS_MASK
from options maks list as they are not available for user control.
Added 'H5_SZIP_' prefix to all remaining option tags.
Made corresponding changes to running text, removing or revising
mentions of deleted option tags.
Platforms tested:
IE 5
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Purpose:
Primarily edits from technical review.
Description:
H5Pget_fill_value -- Corrected 'value' parameter type.
H5Pget_fill_time -- Added H5D_FILL_TIME_IFSET.
H5Pset_filter --Add that filters are applied to chunks in order
in which they were created.
Correct H5Z_FLAG_OPTIONAL description.
Add references to related functions.
Add H5Z_FILTER_SZIP to list of valid filters.
H5Pget_filter -- Add H5Z_FILTER_SZIP to list of possible filters.
H5Pset_szip -- Remove list of publications references.
H5Pset_edc_check -- Reverse notation of default setting.
Copy edits.
Platforms tested:
IE 5, Safari
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Purpose:
Review feedback.
Change "Development notes" to user notes.
New fill_time value (H5D_FILL_TIME_IFSET).
Formatting fix and copy edits.
Description:
(Based primarily on review feedback and developer consultations)
H5Pset_hyper_vector_size -- Clarification on timing.
H5Pmodify_filter -- dapl .vs. dcpl clarification.
H5Pset_filter_by_id -- dapl .vs. dcpl clarification.
H5Pset_szip -- Copy edits.
5Pset_fill_time -- Added new fill_time value, H5D_FILL_TIME_IFSET.
H5Pset_fill_value, H5Pfill_value_defined,
H5Pset_fill_time, H5Pset_alloc_time
-- Added H5Dcreate x-ref to "Notes."
H5Pcreate_class, H5Pregister, H5Pinsert
-- Convert some "development notes" to user notes; delete others.
-- Formatting rework in H5Pregister "Parameters."
Platforms tested:
IE 5, Safari
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Purpose:
To facilitate finding functions, particularly in long Reference Manual
sections.
Solution:
Added alphabetized function listings. (NOTE: Aside from the H5I and H5Z
sections, this is not necessarily the final implementation; there will
likely be another revision in the presentation of this listing before it
is released.)
Platforms tested:
Safari, IE 5
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Purpose:
New and modified functions.
Description:
Added 11 new functions:
H5Pall_filters_avail
H5Pget_filter_by_id
H5Pmodify_filter
H5Pset_hyper_vector_size / H5Pget_hyper_vector_size
H5Pset_family_offset / H5Pget_family_offset
H5Pset_fapl_mpiposix / H5Pget_fapl_mpiposix
H5Pset_multi_type / H5Pget_multi_type
H5Pset_shuffle -- Correct parameter list; copy edits.
Some minor copy edits elsewhere.
Platforms tested:
Safari, IE 5
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Purpose:
Add new function
Description:
Added H5Pset_szip
Platforms tested:
Safari, IE 5
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Purpose:
Link in additional Fortran90 functions.
Description:
Linked 68 new Fortran90 functions to the discussions of the corresponding
C functions. Made the corresponding Fortran index changes in the
function listings at the tops of the RM pages.
Fixed formatting and link typos in RM_H5P.html & fortran/h5p_FORTRAN.html.
Platforms tested:
Safari and IE 5
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Purpose:
New feature: Fill value and storage space allocation changes
Description:
Modified the following functions:
H5Pset_fill_value H5Pget_fill_value
Added the following functions:
H5Pfill_value_defined
H5Pset_fill_time H5Pget_fill_time
H5Pset_alloc_time H5Pget_alloc_time
Platforms tested:
Safari, IE 5
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Purpose:
Adding descriptions of new library features to the RM
Description:
H5Pset_fapl_log: Added new 'buf_size' parameter.
New 'flags' parameter replaced 'verbosity' parameter,
requiring new table describing 20 available flags.
H5Pset_filter: Added valid 'filter' parameter values.
Modified for Fletcher32 EDC filter.
H5Pget_filter: Added return value descriptions.
H5Pset_layout & H5Pget_layout: Modified for compact datasets.
Added the following new functions:
H5Pset_fletcher32
H5Pset_edc_check & H5Pget_edc_check
H5Pset_filter_callback
H5Pset_shuffle
Platforms tested:
Safari
IE 6
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Purpose:
DreamWeaver (DW) adaptation of the HDF5 doc set, introducing the use of
stylesheets and DW libraries.
Stylesheets -- for consistent format management.
DW libraries -- for managing common elements across documents.
Platforms tested:
IE 5 and 6
Netscape
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Added 19 Generic Properties functions.
Development branch only.
Description:
Added Generic Properties functions as follows:
H5Pcreate_class H5Pset
H5Pcreate_list H5Pexist
H5Pclose_list H5Pisa_class
H5Pclose_class H5Pequal
H5Pregister
H5Punregister H5Pget_size
H5Pinsert H5Pget_nprops
H5Premove H5Pget_class_parent
H5Piterate H5Pget_class_name
H5Pcopy_prop H5Pget
Platforms tested:
IE 5.1
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Purpose:
Two new functions and a few copy-edits.
Description:
Added H5Pset/get_small_data_block_size.
Copy edits -- several typographic (spelling) corrections.
Platforms tested:
IE 5
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Purpose:
Bugfixes -- Fixes #657.
Addresses #720 (but does not complete it).
Description:
H5Pset_fapl_split: Added note re checking on use of this driver,
i.e., that H5Pget_driver returns H5FD_MULTI.
Fixes Bug #657.
Minor copy edits, including some addressed in Bug #720.
Platforms tested:
IE 5
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Purpose:
Bugfix. Clarification & extension. Removed old function.
Description:
h5pset/get_fapl_mpio_f & h5pset/get_dxpl_mpio_f:
Corrected function names (mpi --> mpio)
H5Pset_fapl_dpss:
Removed function from RM.
H5Pget_driver:
Corrected return type.
Added list of valid driver identifiers and note re custom drivers.
H5Pcreate:
Added note, per user complaint, that the property must eventually
be closed with H5Pclose, else errors are likely to occur.
Platforms tested:
IE 5
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The caution statement in H5Pset_fapl_split was no longer valid.
Removed it.
Platforms tested:
IE 5.
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Feature
Description:
Updated with the added feature of H5Pset_fapl_split. Added
two examples too.
Platforms tested:
IE 5 plus eyeball.
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Bugfixes and editing.
Description:
RM_H5T.html
H5Tget_class -- Added H5T_ARRAY to list of valid datatype class IDs.
Closes bug #611.
-- Minor formatting issue in same command.
RM_H5F.html
H5Fflush -- Added "Note:" re H5 vs OS buffers.
H5Fclose -- Corrected mentions of H5close to read H5Fclose.
RM_H5P.html
Removed () from several H5* function names in running text.
Platforms tested:
IE 5
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Purpose:
Update "Describes HDF5 Release..." footer from R1.4 to
"Release 1.5, Unreleased Development Branch"
Platforms tested:
IE 5
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Purpose:
Update "Describes HDF5 Release..." footer from R1.4 to
"Release 1.5, Unreleased Development Branch"
Platforms tested:
IE 5
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