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* Develop merge examples (#3851)Allen Byrne2023-11-271-0/+1
| | | | | | | | | * Merge examples repo into library * Change grepTest to be more fault-tolerant * Update examples macro file * Exclude all Fortran examples from doxygen
* Change dest for doxygen (#3856)Allen Byrne2023-11-152-2/+2
| | | * Switch doxygen refs to hdf5/develop
* Update some doxygen links to local refs (#3814)Allen Byrne2023-11-025-14/+14
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* Fix windows cpack error in WiX package. (#3747)Allen Byrne2023-10-231-1/+1
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* Add new API function H5Pget_actual_select_io_mode() (#2974)Neil Fortner2023-10-201-0/+4
| | | This function allows the user to determine if the library performed selection I/O, vector I/O, or scalar (legacy) I/O during the last HDF5 operation performed with the provided DXPL. Expanded existing tests to check this functionality.
* Add an option to disable doxygen warn as error (#3708)Allen Byrne2023-10-192-1/+2
| | | | | | | | | | | | Add for both CMake and the Autotools * HDF5_ENABLE_DOXY_WARNINGS: ON/OFF (Default: ON) * --enable-doxygen-errors: enable/disable (Default: enable) The default will fail compile if the doxygen parsing generates warnings. The option can be disabled if certain versions of doxygen have parsing issues. i.e. 1.9.5, 1.9.8. Fixes #3398
* Sync changes that are only in 1.14 branch (#3704)jhendersonHDF2023-10-181-1/+1
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* Fix several spelling/grammar issues (#3621)jhendersonHDF2023-10-034-4/+4
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* Some minor formatting and text changes (#3563)Allen Byrne2023-09-222-39/+1
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* Fix broken URL. (#3546)H. Joe Lee2023-09-191-2/+2
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* Add API examples doxygen page (#3500)Allen Byrne2023-09-142-1/+1011
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* Add missing row for the ROS3 VFD in table #3415 (#3517)Allen Byrne2023-09-112-40/+117
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* Fix the Fortran extension used in example links (#3430)Allen Byrne2023-08-252-6/+6
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* Add parallel examples in doxygen (#3413)Allen Byrne2023-08-2420-3/+843
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* removed the use of encoded single apostrophe (#3261)Scot Breitenfeld2023-07-204-6/+6
| | | | | | * removed the use of encoded single apostrophe, and fix H5Dread_chunk from write to read * updated sanitizer paragraph * fixed brief description for H5Fget_info
* Replace 1_10 reference with develop branch (#3227)Allen Byrne2023-07-131-10/+10
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* docs: remove redundancy in Data Transfer section of user guide (#3208)H. Joe Lee2023-06-291-1/+1
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* Remove HD from memory allocate/free calls (#3195)Dana Robinson2023-06-281-1/+1
| | | | | | * HDcalloc * HDfree * HDmalloc * HDrealloc
* Many fixes to various compiler warnings (#3124)Sean McBride2023-06-193-3/+3
| | | | | | | | | | | * Fixed various -Wmissing-variable-declarations by adding static keyword * In a few cases, renamed the variable suffix from _g to _s. * Fixed some -Wmissing-variable-declarations by using different declaration macros * Fixed various -Wconditional-uninitialized warnings by just initializing variable to zero * Fixed various -Wcomma warnings * Fixed clang -Wstrict-prototypes warnings * Fixed various -Wunused-variable warnings * Updated some casts to fix the only 3 -Wcast-qual warnings * Fixed the only -Wsometimes-uninitialized warning
* Add Python for HDF-EOS zoo description (#3129)H. Joe Lee2023-06-151-2/+2
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* Fixed typo: hdf5-examples should be hdf5_examples in a link (#3101)bmribler2023-06-111-1/+1
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* Added new HDF5 logo and minor text and link changes to README.md (#3085)Lori Cooper2023-06-081-0/+0
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* Fix doxygen comments in structure and enable FAIL_ON_WARNINGS (#3059)Allen Byrne2023-06-061-1/+1
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* Remove most unused options which are defaulted #2998 (#3019)Allen Byrne2023-05-263-898/+2
| | | | | * Remove most unused options which are defaulted #2998 * Fix property list references
* Fixed Fortran Doxygen warnings (#3017)Scot Breitenfeld2023-05-261-0/+2
| | | | Fixes Fortran doxygen warnings, #2998
* Fix 'datatype' misspellings ('dataype') (#2984)Dana Robinson2023-05-191-1/+1
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* Add missing terminator (#2888)Allen Byrne2023-05-031-1/+1
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* Changes to isolate API Test option files and use fetchcontent (#2880)Allen Byrne2023-05-031-1/+1
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* Add Fortran Selection IO APIs (#2864)Scot Breitenfeld2023-05-011-0/+1
| | | new selection IO fortran APIs with tests
* Remove "the the" from comments and docs (#2865)Dana Robinson2023-05-018-13/+13
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* Implement selection I/O with type conversion (#2823)Neil Fortner2023-04-281-1/+12
| | | | | Initial implementation of selection I/O with type conversion. Allows Parallel collective I/O with type conversion, as long as selection I/O is enabled.
* Added Fortran Async APIs (#2715)Scot Breitenfeld2023-04-211-0/+4
| | | H5A, H5D, H5ES, H5G, H5F, H5L and H5O async APIs were added.
* Addressed various Doxygen grammar issues. (#2524)Scot Breitenfeld2023-03-134-7/+7
| | | | | | | | | | * reviewed H5A * Addressed various grammar issues. * remove double words, spelling fixes * replace the use of rawdata with raw data
* Update ReferenceManual.dox (#2517)mattjala2023-03-081-1/+1
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* Fix H5Dchunk_iter doxygen example, cherry-pick of ef3bed6 (#2519)Mark Kittisopikul2023-03-081-3/+3
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* Fix new codespell issues (#2521)Mark Kittisopikul2023-03-083-3/+3
| | | | | * Fix new codespell issues * Have codespell ignore ./config/sanitizer/sanitizers.cmake
* Missing or misplaced entries in API reference tables #2470 (#2472)Allen Byrne2023-03-012-65/+206
| | | | | * Missing or misplaced entries in API reference tables #2470 * Doxy corrections
* Port VOL connector Guide to doxygen (#2333)Allen Byrne2023-01-182-0/+4910
| | | | | | | * Port VOL connector Guide to doxygen * Fix spelling * Updated VOL UG ref and added release note
* H5F_LIBVER_LATEST changes for move to 1.15 (#2288)Allen Byrne2022-12-211-0/+1
| | | | | | | | | | | | | | | * H5F_LIBVER_LATEST changes for move to 1.15 * Add new default api check * Format fixes * Fix default configure * fix lib version tests * Fix another version variable * Add 1.14 doc link
* Fix doxygen warnings and remove javadocs (#2324)Allen Byrne2022-12-207-14/+12
| | | | | * Fix doxygen warnings and remove javadocs * fix typo
* Removed idioms and misc. text clean-up (#2320)Scot Breitenfeld2022-12-171-9/+4
| | | | | * removed idioms and misc. text clean-up, Issue #2135 * removed idioms and misc. text clean-up, Issue #2135
* Only document Fortran functions (#2319)Scot Breitenfeld2022-12-171-1/+9
| | | | | | | | | * Only document Fortran functions * Only document Fortran functions * Only document Fortran functions * Only document Fortran functions
* Update hdf5_header.htmlGerd Heber2022-12-151-1/+1
| | | Use less awkward language.
* Remove hard-coded version text (#2260)Allen Byrne2022-11-161-1/+1
| | | | | * Remove hard-coded version text * Use macOS 11 until accum test is fixed see #2261
* Multidataset RFC updates (#2238)Gerd Heber2022-11-091-1/+1
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* Update copyright headers (#2184)Larry Knox2022-11-012-14/+8
| | | | | * Updated source file copyright headers to remove "Copyright by the Board of Trustees of the University of Illinois", which is kept in the top-level COPYING file.
* Removed the file, func, line args in the _async APIs fpr doxygen (#2179)Scot Breitenfeld2022-10-251-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | * Removed the: file, func, line args in the _async APIs from the doxygen arguments. Documented H5ESclean. * format fixes * fixed DOXYGEN_PREDEFINED * Fixed the #ifdet logic for doxygen, added missing multi-dataset va_args * format fixes * Use H5_DOXYGEN instead of H5_DOXYGEN_FORTRAN * reordered multidataset declarations * alt. for H5Aclose_async and H5Acreate_async * made doxgyen API into seperate blocks * updated codespell * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Port VOL User Guide to doxygen (#2165)Allen Byrne2022-10-252-1/+674
| | | | | | | | | * Port VOL User Guide to doxygen * Fix spelling * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Implement option for using CMake GNUInstallDirs (#2175)Allen Byrne2022-10-251-1/+1
| | | | | * Implement option for using CMake GNUInstallDirs * Add release notes
* Restructure ref manual presentation (#2123)Allen Byrne2022-09-2710-141/+888
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