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* [svn-r25323] Add h5ff_client_analysis2 test/exampleJerome Soumagne2014-06-182-1/+356
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* [svn-r25316] Brought up to current version I'm running (known by some as ↵Ruth Aydt2014-06-181-265/+690
| | | | | | | | | | | | | | | | | | | | | ...datasets2.c) Usage is: printf( "Usage: %s [-c cols_per_row] [-w rows_per_write] [-r rows_per_read] [-b rows_per_rank] [-i num_iterations] [-p persist_rate] [-e] [-L] [-P] [-S] [-d] [-v] \n", app ); printf( "\tc: number of columns per row (each cell is 8 bytes)\n" ); printf( "\tw: number of rows per write per rank\n" ); printf( "\tr: number of rows per read per rank\n" ); printf( "\tb: number of rows in each rank's block (if not multiple of w or r, may not be fully written or read)\n" ); printf( "\ti: number of iterations to do writes/commit/[persist/evict/prefetch/reads/evict]\n" ); printf( "\tp: persist rate; for /DP and /DS, also impacts evict/prefetch/read/evict\n" ); printf( "\te: enable checksums on raw data in H5Datasets\n" ); printf( "\tL: create /DL dataset - data will not be evicted (created by default if no /DP nor /DS)\n" ); printf( "\tP: create /DP dataset - data will be evicted, replica prefetched, reads from replica\n" ); printf( "\tS: create /DS dataset - data will be evicted, reads from storage (DAOS)\n" ); printf( "\td: print detailed timing information for each read and write operation\n" ); printf( "\tv: verbose output of data values - intended for use only with small arrays and few iterations\n" ); More changes to come, but wanted to get this one committed.
* [svn-r25306] view and analysis shipping fixes and optimizations.Mohamad Chaarawi2014-06-171-1/+1
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* [svn-r25298] run reconfigure.Mohamad Chaarawi2014-06-161-0/+1
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* [svn-r25296] Fix client index container nameJerome Soumagne2014-06-161-1/+3
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* [svn-r25280] merge from latest VOL/trunk branch.Mohamad Chaarawi2014-06-1310-489/+497
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| * [svn-r25254] merge from trunk.Mohamad Chaarawi2014-06-1110-488/+497
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| | * [svn-r25188] Implement change to cmake_ext_mod config folderAllen Byrne2014-05-141-1/+1
| | | | | | | | | | | | Tested: local linux
| | * [svn-r25117] Removed LT_ADD_LIBHDF5_DEPENDENCY configure conditional to roll ↵Larry Knox2014-04-251-1/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | back fix for removing rpaths from l ib files. The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath co nfigure option was invoked. Added instead configure variable hardcode_into_lib=no. This removes rpath from lib files on Linux and solaris machines. Tested with h5committest on jam, koala, ostrich and platypus (cmake), and with configure option --disable-sharedlib-rpath on emu, platypus and quail.
| | * [svn-r25113] Fixed Subversion EOL and executable attributes. No code changes.Dana Robinson2014-04-257-471/+471
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| | * [svn-r24997] Added compiler versions for mpich to settings file and ↵Larry Knox2014-04-092-15/+25
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | configure summary. For make installcheck, compile and run installed examples using the installed scripts. They were being compiled but not run. Add Fortran2003 examples to the run-ex-fortran script when fortran2003 is enabled. Set flag to -O3 in production mode for Intel compilers other than those with specified other settings. Gentoo patches: Remove unnecessary setting of LD_LIBRARY_PATH from configure. Prevent potential array subscript out of bounds error in perform/pio_engine.c and sio_engine.c. Tested with h5committest on jam, koala, ostrich and platypus, on emu and kite, and parallel tests on jam, koala and platypus with mpich built with gnu 4.8.2 and with intel compilers.
* | | [svn-r25278] run reconfigure.Mohamad Chaarawi2014-06-131-2/+3
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* | | [svn-r25277] Add H5_HAVE_ALACRITY definition for autoconf and add index prog ↵Jerome Soumagne2014-06-132-0/+300
| | | | | | | | | | | | into examples
* | | [svn-r25272] reconfigureMohamad Chaarawi2014-06-121-0/+1
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* | | [svn-r25264] implement H5TRset_dependency()Mohamad Chaarawi2014-06-111-5/+36
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* | | [svn-r25262] user hyperslab selection instead of point selection when ↵Mohamad Chaarawi2014-06-111-3/+6
| | | | | | | | | | | | applying query on a region.
* | | [svn-r25244] first cut on new analysis shipping.Mohamad Chaarawi2014-06-093-20/+29
| | | | | | | | | | | | - missing AND / OR for regions (faking now).
* | | [svn-r25235] Add -l switch to control whether or not /DL is created. (may ↵Ruth Aydt2014-06-021-57/+85
| | | | | | | | | | | | want to do some tests w/o it)
* | | [svn-r25226] - implement and use H5Dquery_ff() when creating views (not ↵Mohamad Chaarawi2014-05-291-2/+1
| | | | | | | | | | | | | | | | | | tested with indexing enabled yet). - cleanup old indexing code in view create at the client as it's not needed anymore.
* | | [svn-r25221] Added checks for failed malloc/callocRuth Aydt2014-05-274-11/+11
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* | | [svn-r25219] Add check for return value from calloc.Ruth Aydt2014-05-271-46/+94
| | | | | | | | | | | | | | | Add reporting of MB/sec for timing output Add some additional output regarding experiment size, etc.
* | | [svn-r25213] - fix Queries on attributes when constructing Views.Mohamad Chaarawi2014-05-221-6/+70
| | | | | | | | | | | | - add example
* | | [svn-r25210] - implement ViewsMohamad Chaarawi2014-05-211-225/+302
| | | | | | | | | | | | | | | * not fully tested yet - other bug fixes
* | | [svn-r25196] Add a barrier before EFF_finalize()Ruth Aydt2014-05-161-0/+1
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* | | [svn-r25195] add needed barrier in prefetch test.Mohamad Chaarawi2014-05-151-0/+3
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* | | [svn-r25194] - add required barrier in M7.2 demo programMohamad Chaarawi2014-05-151-0/+3
| | | | | | | | | | | | - add USER env to file_name of eff_vpic when corrupting to allow others to run corruption tests.
* | | [svn-r25182] - implement skip as transaction aborts for now (not IOD skip)Mohamad Chaarawi2014-05-122-92/+183
| | | | | | | | | | | | - implement sub-object prefetch for datasets and maps
* | | [svn-r25179] Fix assert to use correct *space_id in checkRuth Aydt2014-05-081-1/+1
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* | | [svn-r25176] - use dxpls instead of access property lists in prefetch and ↵Mohamad Chaarawi2014-05-074-63/+40
| | | | | | | | | | | | | | | | | | | | | | | | evict calls. - remove two routines: H5Pset_read_replica and H5Pset_evict_replica. - add new routine: H5Pset_dxpl_replica - update implementation and examples
* | | [svn-r25171] - fix bugs with dt conversions in non-coresident modeMohamad Chaarawi2014-05-068-85/+124
| | | | | | | | | | | | - change example to have rcacquire done from 1 rank
* | | [svn-r25165] - avoid memcpy in coresident mode.Mohamad Chaarawi2014-05-052-11/+9
| | | | | | | | | | | | - fix several bugs in dt conversions.
* | | [svn-r25160] - fix issue with global variables for Mercury callback IDsMohamad Chaarawi2014-05-051-1/+1
| | | | | | | | | | | | - don't memcpy in coresident mode (in H5Dwrite - more comming soon).
* | | [svn-r25156] change ASSERT_RET wher it should be different assertRuth Aydt2014-05-032-4/+9
| | | | | | | | | | | | add barriers to ...client_timings.c, similar to what was needed in time_datasets.c
* | | [svn-r25155] Removed ASSERT_RET from places it shouldn't be called.Ruth Aydt2014-05-031-37/+37
| | | | | | | | | | | | | | | Only rank 0 acquires rc1, not others. And, mistaken use of rc_id (in place of rc1_id). Deleted altogether. Other cosmetic changes, such as print acquire by all ranks, not just 0.
* | | [svn-r25154] couple more cosmetic thingsRuth Aydt2014-05-031-2/+2
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* | | [svn-r25153] Remove some ASSERT_RET calls that should not have been there.Ruth Aydt2014-05-031-51/+55
| | | | | | | | | | | | Cosmetic changes w.r.t. spacing / braces for consistency.
* | | [svn-r25152] cosmetic changes for consistent formattingRuth Aydt2014-05-031-3/+5
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* | | [svn-r25150] Add coresident support: Mohamad Chaarawi2014-05-022-24/+26
| | | | | | | | | | | | | | | - need to set H5ENV_CORESIDENT to 1 to use that mode - still doing memcpy for raw data now.
* | | [svn-r25142] - comment out IOD layout code as it does not work anymore with ↵Mohamad Chaarawi2014-05-0114-17/+38
| | | | | | | | | | | | | | | | | | new IOD - prepend username to file name in tests
* | | [svn-r25139] - switch to latest mercuryMohamad Chaarawi2014-04-303-9/+23
| | | | | | | | | | | | | | | | | | - evict metadata KVs for objects - add H5Aprefetch/evict - some code refactoring and bug fixing.
* | | [svn-r25107] By default, disable checksums on datasets - both at IOD level & ↵Ruth Aydt2014-04-251-17/+63
| | | | | | | | | | | | | | | | | | | | | | | | on transfers. To work around OOM problem at IOD and also to see time w/o checksums. Use the -e option to "enable checksums" -- the default behavior for apps that don't use properties to disable.
* | | [svn-r25090] Updated to build examples/*time_datasets...Ruth Aydt2014-04-242-2/+2
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* | | [svn-r25089] Times writes/persists/evicts/prefetchs/reads of 2D 64-bit ↵Ruth Aydt2014-04-241-0/+812
| | | | | | | | | | | | | | | | | | arrays with command-line options controlling array size and evict/prefetch behavior.
* | | [svn-r25080] Added missing START_TIME before map evict operation. Ruth Aydt2014-04-221-0/+1
| | | | | | | | | | | | Would have made evict be reported as longer than it really was w/o this.
* | | [svn-r25079] Add entry for h5ff_client_timingsRuth Aydt2014-04-222-2/+4
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* | | [svn-r25078] Test program that accepts parameters to control size of ↵Ruth Aydt2014-04-221-0/+1118
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Datasets and Maps in container and times/reports writes / persists / evicts / prefetches / reads. Reads are of form "rank reads data it wrote", "rank reads data written by next rank" and "rank reads all data" Reads are done from logged data, prefetched data, or data on DAOS. Designed to give insights comparing performance of Arrays & KVs and accessing data in various layers of the storage stack.
* | | [svn-r25069] - fix some analysis shipping bugsMohamad Chaarawi2014-04-182-75/+46
| | | | | | | | | | | | | | | - fix bug in H5Dset_extent when used asynchronously - fix bug in example where H5Dset_extent is used.
* | | [svn-r25049] Prepend user name to file name so that per-user files can be ↵Ruth Aydt2014-04-152-5/+24
| | | | | | | | | | | | managed better since no support for subdirs by IOD.
* | | [svn-r24988] - update M6.2,7.3 examples to do acquire from 1 ranks, and ↵Mohamad Chaarawi2014-04-083-198/+218
| | | | | | | | | | | | | | | | | | remove workarounds - update analysis shipping example to remove native macro.
* | | [svn-r24963] fix bug in view example.Mohamad Chaarawi2014-04-041-0/+5
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