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* Fixed Spelling Errors (#1166)Scot Breitenfeld2021-12-076-13/+13
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * fixed missed closing of a dataset * fixed missed closing of a dataset * fixed typo in error return * Committing clang-format changes * minor edits * code format * Committing clang-format changes * code format * minor edit * switched from using MPI_count, to actual bytes written for H5FD_mpio_debug rw debugging * Committing clang-format changes * changed size_i in printf to reflect the I/O. * Committing clang-format changes * Fixed seg fault with xlf on BE with -qintsize=8 * fixed error function string * spelling corrections via codespell, added new spell check github actions * Committing clang-format changes * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * Committing clang-format changes * misc * misc * misc * misc * misc * misc * Committing clang-format changes * misc * work around for https://github.com/codespell-project/codespell/issues/2137 * misc * added missing file * misc * misc. * misc * switch to using Codespell with GitHub Actions * misc. * misc. * fixed more sp errors * Fix new typos found by codespell. * fixed proceed with precede * fixed variable in fortran test * fixed minnum * updated spelling list Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
* Update license url part2 (#333)Larry Knox2021-02-1724-24/+24
| | | | | | * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING file - files not in src or test.
* OESS-98 merge with clang-format changesAllen Byrne2020-09-251-6/+6
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* Make examples installation respect DESTDIR. FixesDavid Young2020-05-261-2/+2
| | | | HDFFV-11060.
* Trim trailing whitespaceQuincey Koziol2020-04-208-115/+115
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* Flag construction must be after compiler detectionAllen Byrne2020-04-051-54/+49
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* TRILAB-142 Change minimum CMake version to 3.12Allen Byrne2020-02-211-1/+1
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* HDFFV-11001 need to qualify all by parallel or serial typesAllen Byrne2020-01-151-68/+70
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* HDFFV-11001 Add fine control over testingAllen Byrne2020-01-151-1/+1
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* Apparently, + has no special meaning, and neither does \+, in so-calledDavid Young2019-11-121-1/+1
| | | | | | | | "obsolete" / POSIX "basic" regular expressions. Also, not every version of `sed` out there supports the `-E` option. So delete the -E flag and use the regex `[^/][^/]*` instead of `[^/]+`. Add config/netbsd to the MANIFEST.
* Make these scripts relocatable again: derive a relative path for theDavid Young2019-11-051-1/+24
| | | | | | | original installation prefix from the examples prefix. Use that relative path to locate the current installation prefix, always. Fall back to an absolute installation prefix if the relative path cannot be derived.
* Let us override the examples directory using --with-examplesdir=DIR.David Young2019-10-032-3/+3
| | | | | | | | | This is handy for NetBSD where HDF5 examples are installed by convention in $prefix/share/examples/hdf5/ rather than in ${prefix}/share/hdf5_examples/, which is the HDF5 default. Place hdf5_examples/ under ${datarootdir} which on most systems will be ${prefix}/share/, anyway.
* Under the examples directories, always find the installed HDF5David Young2019-10-031-1/+1
| | | | | | | | | | executables and scripts using @prefix@ instead of a relative path, because the number of ../ in the relative path will be different on NetBSD than on other systems. Examples on NetBSD are installed at ${prefix}/share/examples/hdf5/ instead of at ${prefix}/share/hdf5_examples/, by convention. It may be the same on other BSDs, I'm not sure.
* Merge pull request #1826 in HDFFV/hdf5 from ↵Dana Robinson2019-08-011-1/+1
|\ | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:develop_minor_pr to develop * commit '4227b8948d7091205b4f8dc1271d7dcae01bb0fb': Reverts the removal of config/conclude_fc.am while keeping the changes to config/gnu-fflags. Fixed a couple of typos.
| * Reverts the removal of config/conclude_fc.am while keepingDana Robinson2019-08-011-1/+1
| | | | | | | | the changes to config/gnu-fflags.
* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2019-07-291-1/+1
|\ \ | |/ | | | | | | | | | | | | * commit 'd169391529f253a9903b8e6cacf38c59ceefab07': Parallel Fortran tests now use the MPI module instead of including mpif.h. First stab at gfortran versions. Tested on gfortran 7-9 so far. Moved the -std=f2008 option to gfortran 9 for now. Updated gfortran options. * Removed conclude_fc.am, which was causing verbose builds. Need to investigate more, though. * Added gfortran 9 warnings and flags. This will need to be separated into other version blocks based on when the options first appeared. * The standard is now explicitly set at 2008.
| * Merge pull request #1808 in HDFFV/hdf5 from ↵Dana Robinson2019-07-291-1/+1
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:gnu-flags-work to develop * commit '7d291d059da6287f769951c4854c566da0b93ce8': Parallel Fortran tests now use the MPI module instead of including mpif.h. First stab at gfortran versions. Tested on gfortran 7-9 so far. Moved the -std=f2008 option to gfortran 9 for now. Updated gfortran options. * Removed conclude_fc.am, which was causing verbose builds. Need to investigate more, though. * Added gfortran 9 warnings and flags. This will need to be separated into other version blocks based on when the options first appeared. * The standard is now explicitly set at 2008.
| | * Updated gfortran options.Dana Robinson2019-07-171-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | * Removed conclude_fc.am, which was causing verbose builds. Need to investigate more, though. * Added gfortran 9 warnings and flags. This will need to be separated into other version blocks based on when the options first appeared. * The standard is now explicitly set at 2008.
* | | HDFFV-10529 Update CMake tests to use test fixturesAllen Byrne2019-07-231-27/+25
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* | HDFFV-10845 use of TARGETFILE disables auto emulatorAllen Byrne2019-07-171-2/+4
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* HDFFV-10805 Add option to only build shared targetsAllen Byrne2019-06-182-170/+65
| | | | | HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static HDFFV-10803 Update FindSZIP.cmake find module Remove unneeded modules and update java modules
* HDFFV-10703 Update CMake commands to latest standardAllen Byrne2019-02-151-6/+6
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* Refactor mpi test namesAllen Byrne2019-02-111-2/+2
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* Rename parallel tests to start with PAR_Allen Byrne2019-02-111-2/+2
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* Remove F2003 Option and referencesAllen Byrne2019-02-062-46/+32
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* Change prefix in example scripts to relative path to bin. This was doneLarry Knox2018-08-231-1/+1
| | | | | for 1.8, and works wherever installed without the need to replace the original prefix.
* Add fortran MPI to test and exampleAllen Byrne2018-06-061-2/+4
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* Fix typoAllen Byrne2018-05-241-1/+1
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* Remove link flag from compile commandAllen Byrne2018-05-221-3/+0
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* Correct command usageAllen Byrne2018-05-071-6/+6
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* Remove APPENDAllen Byrne2018-05-031-16/+22
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* Fix another command revertAllen Byrne2018-05-031-12/+18
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* Missed a command revertAllen Byrne2018-05-031-6/+9
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* Revert to old style for LINK_FLAGS gen expr not workingAllen Byrne2018-05-031-16/+19
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* LINK_FLAGS must be separate property setsAllen Byrne2018-05-031-18/+36
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* Fix link flags syntaxAllen Byrne2018-05-031-18/+18
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* Revert refactor link flagsAllen Byrne2018-05-021-18/+18
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* refactor link flags to interfaceAllen Byrne2018-05-021-18/+18
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* TRILABS-19 fix syntax for windowsAllen Byrne2018-05-021-3/+3
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* TRILABS-19 Link flags need - characterAllen Byrne2018-05-021-6/+6
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* TRILABS-19 fix fortran link flagsAllen Byrne2018-04-301-9/+9
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* TRILABS-19 Refactor fortran propertiesAllen Byrne2018-04-301-36/+81
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* TRILABS-19 fix typosAllen Byrne2018-04-271-1/+1
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* TRILABS-19 remove add_defintions and use generator expressionsAllen Byrne2018-04-261-24/+30
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* TRILABS-20 set a compiler name on all project commandsAllen Byrne2018-04-201-1/+1
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* TRILABS-19 All c code INCLUDE_DIRECTORIES convertedAllen Byrne2018-04-181-6/+6
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* TRILABS-19 Initial conversion of include_directories to targetsAllen Byrne2018-04-171-1/+2
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* Change CMake min to 3.10Allen Byrne2018-03-091-1/+1
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* Inc CMake min, Add new tests, rework test CMake filesAllen Byrne2018-02-271-1/+1
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* HDFFV-10385 rework java namesAllen Byrne2018-01-171-6/+0
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