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* [svn-r14903] Undoing change committed in r14902.Scot Breitenfeld2008-04-301-1026/+8
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* [svn-r14902] Merged fortran_1_8 branch changes r14505:14901 into the trunk. ↵Scot Breitenfeld2008-04-301-8/+1026
| | | | New fortran wrappers added.
* [svn-r14208] Description:Quincey Koziol2007-10-181-30/+24
| | | | | | | | | | | | | | | | | | | | Make H5Pget_filter_by_id() API versioned and switch internal usage to H5Pget_filter_by_id2(). Add simple regression test for H5Pget_filter_by_id1(). Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14206] Description:Quincey Koziol2007-10-171-39/+31
| | | | | | | | | | | | | | | | | | | | Make H5Pget_filter API versioned and switch internal usage to H5Pget_filter2. Add regression test for H5Pget_filter1. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14204] Description:Quincey Koziol2007-10-121-11/+9
| | | | | | | | | | | | | | | | | | | | | | Move H5Pinsert() out of old "compat v1.6" section and into API versioning, switching internal usage to H5Pinsert2(). Add regression test for H5Pinsert1() Clean up some other minor warnings. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14202] Description:Quincey Koziol2007-10-111-11/+9
| | | | | | | | | | | | | | | | | | | | | | Move H5Pregister our of old "compat v1.6" section and add it to the versioned symbols. Add simple regression test for H5Pregister1() Split H5P.c source file into H5P/H5Pint/H5Pdeprec files. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r13766] In Visual Studio 2005 for 64-bit, _WIN32 is defined, but not ↵Scott Wegner2007-05-181-2/+2
| | | | | | | WIN32, so I've standardized all #ifdef's to use _WIN32. This should not affect any other platform. Tested: Visual Studio (32- and 64-bit) on Win XP
* [svn-r13253] Updated all C and C++ style source code files with the THG ↵Albert Cheng2007-02-071-2/+3
| | | | | | | | | copyright notice. Tested platform: Kagiso only since it is only a comment block change. If it works in one machine, it should work in all, I hope. Still need to check the parallel build on copper.
* [svn-r12842] Description:Quincey Koziol2006-11-021-4/+4
| | | | | | | | | | | | | | | | Refactor generic property list initialization code to put property list specific routines in property list modules, instead of scattered to the four winds. Also, introduce property list class initialization objects, to make adding new property list classes in the library easier. Fix daily test failure by using H5Pget_elink_prefix() API routine instead of looking at the "raw" generic property list information. Tested on: Mac OS X/32 10.4.8 (amazon) FreeBSD/32 4.11 (sleipnir) w/threadsafe Linux/32 2.4 (heping) w/C++ & FORTRAN Linux/64 2.4 (mir) w/build-all & 1.6 compat
* [svn-r12752] Descripton: This is a port to G95 compiler for MAC OSX and AIX 5.2Elena Pourmal2006-10-121-29/+194
| | | | | | | | | | | | | | | | Previous implementation failed to compile on MAC OS X Tiger 10.4 and AIX 5.2 In previous implementation, each overloaded Fortran function called the same C function. Since declaration of parameters in INTERFACE block for C Function differed, some compilers issued warnings but g95 on MAC and AIX failed to compile. Solution: Add C wrappers corresponding to each overloaded Fortran function to call C stub function. This fix should also reduce number of warnings on IRIX systems. Platforms tested: MAC OS and AIX 5.2 (copper) with g95; sol (with Sun compilers), heping with PGI compilers
* [svn-r11432] Elena Pourmal2005-09-181-1/+1
| | | | | | | | | | | | | Purpose: Typo fix Description: Declaration of long double variable was after executable statement. Many compilers choked ;-( Solution: Declare variable before the first executable statement Platforms tested: shanti (compilation only), copper (tests passed) Misc. update:
* [svn-r11427] Purpose: SX-6 portElena Pourmal2005-09-171-2/+4
| | | | | | | | | | | | | | | | | Description: Fortran multi_file test failed on SX-6. It turned out that compiler could not handle (long long HADDR_MAX) * ( float var). The result of this operation was 0. Solution: Introduced long double variable to store the value of HADDR_MAX and use the new variable in * operation. (Suggested by John) Platforms tested: SX-6, mir with PGI compilers; a very minor change Misc. update:
* [svn-r11245] Purpose:Quincey Koziol2005-08-131-316/+316
| | | | | | | | | | | | | | | | | | | | Code cleanup Description: Trim trailing whitespace, which is making 'diff'ing the two branches difficult. Solution: Ran this script in each directory: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r10970] Purpose: New feature/bug #350 fixElena Pourmal2005-06-221-1/+1
| | | | | | | | | | | | | | | | | | | | Description: When compiler flag was used to set the size of Fortran integer to 8 bytes, library would fail. Solution: Cleaned up the code; added detection of Fortran INTEGER type size and appropriately defined int_f type for C-stubs routines. Platforms tested: Solaris 2.8 32 and 64-bit, AIX 5.1 64-bit parallel PGI Fortran with -i8 flag on heping Absoft Fortran with -i8 flag on heping g95 on mir (Fortran integer is 8 bytes by default that cannot be changed - compiler bug ;-) AIX Fortran with -qintsize=8 32 and 64-bit modes on copper Misc. update:
* [svn-r9727] Purpose:Quincey Koziol2004-12-291-50/+44
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-) Description: Generally speaking, this is the "signed->unsigned" change to selections. However, in the process of merging code back, things got stickier and stickier until I ended up doing a big "sync the two branches up" operation. So... I brought back all the "infrastructure" fixes from the development branch to the release branch (which I think were actually making some improvement in performance) as well as fixed several bugs which had been fixed in one branch, but not the other. I've also tagged the repository before making this checkin with the label "before_signed_unsigned_changes". Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel & fphdf5 FreeBSD 4.10 (sleipnir) w/threadsafe FreeBSD 4.10 (sleipnir) w/backward compatibility Solaris 2.7 (arabica) w/"purify options" Solaris 2.8 (sol) w/FORTRAN & C++ AIX 5.x (copper) w/parallel & FORTRAN IRIX64 6.5 (modi4) w/FORTRAN Linux 2.4 (heping) w/FORTRAN & C++ Misc. update:
* [svn-r8781] James Laird2004-07-011-2/+2
| | | | | | | | | | | | | | | | Purpose: HDF5 now supports SZIP with no encoder. Description: SZIP can be configured to have both encoder and decoder or just to have the decoder. HDF5 can now query the configuration of any filter, and will throw errors if users try to write using a filter with encoding disabled. Solution: Added H5Zget_filter_info function, changed API for H5Pget_filter and H5P_get_filter_by_id. See SZIP RFC. Platforms tested: Copper (fortran, C++, parallel), Sleipnir (C++), Arabica (fortran, C++), Verbena (fortran, C++) Misc. update:
* [svn-r8383] Purpose:Quincey Koziol2004-04-181-3/+3
| | | | | | | | | | | | | Code cleanup Description: Clean up lots of warnings based on those reported from the SGI compilers as well as gcc. Platforms tested: SGI O3900, IRIX64 6.5 (Cheryl's SGI machine) FreeBSD 4.9 (sleipnir) w/ & w/o parallel h5committest
* [svn-r8149] Pedro Vicente Nunes2004-02-041-5/+5
| | | | | | | | | | | | | | Purpose: replaced name of delete filter with remove filter for the new function H5Premove_filter Description: Solution: Platforms tested: linux Misc. update:
* [svn-r8117] Purpose:Quincey Koziol2004-01-271-0/+33
| | | | | | | | | | | | | Code cleanup Description: Add C++ and FORTRAN wrappers for new H5Pdelete_filter routine, along with documentation and a note in the release notes. Platforms tested: FreeBSD 4.9 (sleipnir) Linux 2.4 (verbena) w/ C++ and FORTRAN Too minor for full h5committest
* [svn-r8038] Purpose:Quincey Koziol2004-01-081-2/+2
| | | | | | | | | | | | | | | | | | | | Bug fix Description: When two property lists are compared, the H5Pequal routine was just comparing the raw information for the property values. This causes problems when the raw information contains pointers to other information. Solution: Allow a 'compare' callback to be registered for properties, so that a user application get perform the comparison itself, allowing for "deep" compares of the property value. This was exported to the H5Pregister & H5Pinsert routines in the development branch, but not the release branch. Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
* [svn-r7621] Elena Pourmal2003-10-131-6/+6
| | | | | | | | | | | | | Purpose: Rolling over changes from 1.6 branch Description: h5pget(set)_cache_f functions had a wrong type of the third parameter Solution: Fixed the type to be INTEGER(SIZE_T) Platforms tested: kelgia, arabica 64-bit, copper 64-bit Misc. update:
* [svn-r7611] Purpose:Quincey Koziol2003-10-131-19/+19
| | | | | | | | | | | | Code cleanup Description: Cleaned up various compiler warnings Platforms tested: FreeBSD 4.9 (sleipnir) Linux 2.4 (verbena) w/FORTRAN too minor for h5committest
* [svn-r7601] Elena Pourmal2003-10-101-2/+4
| | | | | | | | | | | | | | Purpose: Bug fix Description: Parameter rdcc_nelmts of the h5pget_cache_f subroutine had wrong INTEGER(SIZE_T) instead of INTEGER type. Solution: Fixed the type Platforms tested: arabica in 64-bit mode (where INTEGER(SIZE_T) is not the same as INTEGER) Misc. update:
* [svn-r7529] Purpose: Code cleanupElena Pourmal2003-10-011-1/+2
| | | | | | | | | | | | | Description: On Linux systems valdrind tool complained about memroy leaks in the following statements like if(!a) free(a); Solution: replaced the statements with if ( a != NULL) free(a); Platforms tested: eirene (too small for committest) Misc. update:
* [svn-r7379] Purpose:Quincey Koziol2003-08-181-4/+4
| | | | | | | | | | | | Code cleanup Description: Changed version #'s returned from H5Pget_version from 'int *' to 'unsigned *' since we are never going to be using negative version #'s... :-) Platforms tested: FreeBSD 4.8 (sleipnir) too small to need h5committest
* [svn-r7341] Purpose:Albert Cheng2003-08-111-12/+12
| | | | | | | | | Updated, cleanup or added Copyright notice. Platforms tested: "h5committested" Misc. update:
* [svn-r7201] Purpose:Quincey Koziol2003-07-101-8/+8
| | | | | | | | | | | | | Code cleanup Description: Finish converting the B-tree 'K' values to use unsigned integers, rather than signed ones, since negative amounts of entries in a B-tree node aren't meaningful. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7192] Purpose:Quincey Koziol2003-07-091-1/+1
| | | | | | | | | | | Code cleanup Description: Clean up various minor warnings in the library. Platforms tested: FreeBSD 4.8 (sleipnir) too small to need h5committest
* [svn-r7181] Purpose:Quincey Koziol2003-07-071-76/+0
| | | | | | | | | | | Version update Description: Removed 1.4 compatibility code in the library. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7050] Elena Pourmal2003-06-181-2/+2
| | | | | | | | | | | | | | | | | | | | | Purpose: Bug fix Description: On Windows Fortran szip test failed in debug mode. It turned out that C-stub for H5Pget_filter_by_id didn't calculate the correct value of namelen parameter that is passed to the H5Pget_filter_by_id function. As a result fortran parameter that hold creation property id was overwritten and h5fdcreate_f failed. Solution: Fixed the value of namelen parameter to the H5Pget_filter_by_id function. Platforms tested: Windows 2000 with VF both debu and release modes, sol, verbena. Misc. update:
* [svn-r6684] Elena Pourmal2003-04-151-15/+30
| | | | | | | | | | | | | | | | | | | Purpose: Added copyright statement; cleaned code and fixed bugs for Windows and Cray T90IEEE Description: Fortran files did not have copyright statement; VL types did not work on T90IEEE since I never brought the correct code from 1.4 branch; there were compilation warnings on Windows; some character parameters were not passed correctly to C stubs causing tests to fail on Windows. Solution: Added copyright statement and clean the code. Platforms tested: CRAY T90IEEE, arabica, modi4 with parallel, Windows 2000 Only static tests (both debug and release) passed on Windows. DLLs have multiple problems ;-) Misc. update:
* [svn-r6641] Elena Pourmal2003-04-121-3/+182
| | | | | | | | | | | | | | | | | | Purpose: Catching up with C library Description: I added four new functions h5pset_szip_f h5pget_filter_by_id_f h5pmodify_filetr_f h5pall_filters_avail_f Solution: Platforms tested: arabica (with and without SZIP Library), modi4 (with SZIP and parallel) burrwhite (with SZIP and PGI C and Fortran compilers) Misc. update:
* [svn-r6602] Purpose:Quincey Koziol2003-04-091-4/+2
| | | | | | | | | | | | | | | | | | Code cleanup Description: Adjusted parameters for fortran wrappers of H5Pset_shuffle to match the changes to the C API function. Solution: Platforms tested: FreeBSD 4.8 (sleipnir) w/szip Linux 2.4 (sleipnir) w/szip Solaris 2.7 (arabica) w/FORTRAN IRIX64 6.5 (modi4) w/szip, FORTRAN & parallel Misc. update:
* [svn-r6573] Elena Pourmal2003-04-021-0/+212
| | | | | | | | | | | | | | Purpose: Maintenance Description: New fortran APIs h5pset_fapl_multi and h5pget_fapl_multi have been added Solution: Platforms tested: burrwhite with PGI compilers, arabica and modi4 with --enable-parallel Misc. update:
* [svn-r6494] Elena Pourmal2003-03-191-0/+99
| | | | | | | | | | | | | | | | | | | | | Purpose: Catching up with the C library Description: Added the follwoing new fortran functions h5iget_name_f h5tis_variavle_str_f h5zunregister_f h5zfilter_avail_f h5pset_shuffle_f h5pset_fletcher32 h5pset_edc_check_f h5pget_edc_check_f h5dfill_f Solution: Platforms tested: arabica(C and F90), burrwhite (pgcc and pgf90), modi4 (F90 and parallel) Misc. update:
* [svn-r6464] Elena Pourmal2003-03-051-36/+906
| | | | | | | | | | | | | | | | | | Purpose: Maintenance Description: * Added support for generic properties. * Added support for time allocation properties. * Added support for variable length datatypes (only datatypes based on INTEGER, REAL and CHARACTER Fortran types are supported). * added some missing functions Solution: I am checking in new Fortran APIs and their man pages to support 1.5 features listed above. Not all APIs have tests yet. APIs were written in Fall 2002, and I am afraid that I will loose the code or totally forget what I did if I wait longer. ;-) Platforms tested: arabica (fortran), eirene (fortran), modi4 (parallel, fortran)
* [svn-r5958] Elena Pourmal2002-10-021-0/+51
| | | | | | | | | | | | | | Purpose: Added missing fortran functions h5set(get)_buffer_f. Also added docs and tests for them. Solution: Currently functions do not accept conversion and background buffers. This corresponds to H5set(get)_buffer call with buffer pointers set to NULL. If there is a demand, I can overload the functions to have new parameters and go through all trouble creating functions for all supported datatypes. Platforms tested: Solaris 2.7, Linux 2.2., IRIX64-6.5
* [svn-r5956] Elena Pourmal2002-10-011-1/+89
| | | | | | | | | | | | | | | | | | Purpose: Added new F90 APIs Description: I added new F90 APIs, tests, and documentation for the following functions: h5fget_obj_count_f h5pequal_f h5tget_member_index_f h5fget_obj_ids_f h5pget_fclose_degree_f h5pset_fclose_degree_f Documentation for exisiting functions was missing: h5freopen_f, h5fflush_f, h5fmount_f, h5unmount_f, h5fget_create_plist_f, h5fget_access_plist_f. Platforms tested: Solaris 2.7, Linux 2.2 and IRIX64-6.5
* [svn-r5490] Purpose:Elena Pourmal2002-05-311-88/+109
| | | | | | | | | Code cleanup Description: While working on the "External test" failure I restructured and cleaned up some C stub code. Platforms tested: dangermouse (Linux 2.4)
* [svn-r5444] Purpose:Quincey Koziol2002-05-201-4/+9
| | | | | | | | | | Code cleanup Description: Clean up warnings on IRIX64 6.5 (modi4) Platforms tested: IRIX64 6.5 (modi4)
* [svn-r5066] Elena Pourmal2002-03-141-4/+4
| | | | | | | | | | | | | Purpose: Bug fix Description: I borrowed function HDpackFstring from the HDF4 Library and left name unchanged. It causes linking problems for Fortran users that use both HDF4 and HDF5 Libraries in their applications. Solution: Changed the name to be HD5packFstring Platforms tested: Solaris 2.7
* [svn-r5038] Elena Pourmal2002-03-061-0/+3
| | | | | | | | | | | Purpose: Bug fix Description: Several C stub functions were not releasing allocated strings. Solution: Fixed Platforms tested: Solaris 2.7
* [svn-r4683] Purpose:Quincey Koziol2001-12-071-0/+4
| | | | | | | | | | | | | | Bug fix. Description: Fix fortran stub for H5P[gs]et_hyper_cache. Solution: Made the fortran subs not execute any function calls into the library, unless v1.4 compatibility is turned on. Elena will be following this up with a real fix. Platforms tested: FreeBSD 4.4 (hawkwind)
* [svn-r4482] Purpose:Quincey Koziol2001-09-261-20/+6
| | | | | | | | | | | | | | | | | | | | | | Kludge Description: Since we're only about halfway through converting the internal use of property lists from the "old way" to the generic property lists, we turned off snapshots to avoid exposing lots of API changes to users, until the APIs settled down. Getting the snapshots rolling again seems to have become a priority, so some changes are going to have to be made now that were going to be postponed until we were completely finished with the conversion. This requires that the old API functions be able to deal with both the old and new property lists smoothly. Solution: Kludge together the property list code so that they can transparently handle dealing with both the old and new property lists Platforms tested: FreeBSD 4.4 (hawkwind)
* [svn-r4327] Purpose:Quincey Koziol2001-08-111-5/+12
| | | | | | | | | More code cleanups Description: Wrap up the code cleanups for changing the dataset transfer property lists over to using the generic property list code. Platforms tested: IRIX64 6.5 (modi4)
* [svn-r4326] Purpose:Quincey Koziol2001-08-101-1/+1
| | | | | | | | | | Code cleanups, mostly.. Description: Work on pacifying the SGI compiler to get the generic properties working correctly with --enable-parallel and --enable-fortran. It's not quite fixed yet, but I need to head home and these patches help... :-/ Platforms tested: IRIX64 6.5 (modi4)
* [svn-r3649] Elena Pourmal2001-03-161-79/+93
| | | | | | | | | | | | | | | | | | Purpose: Windows port and maintenance Description: Each C function called from F90 subroutine requires explicit interface. Some drivers functions were not implemented. Solution: Added interfaces and comment blocks to each F90 subroutine. Added the following subroutines: h5pset(get)_fapl_core_f h5pset(get)_fapl_family_f h5pset_fapl_sec2_f h5pset_fapl_stdio_f Platforms tested: Linux (eirene) to make sure that code still works on UNIX. More UNIX platforms will be tested before moving to Windows.
* [svn-r3306] Elena Pourmal2001-01-191-16/+17
| | | | | | | | | | | | Purpose: Bug fix. Description: While building on T3E, I noticed several compiler warnings about variable being used before its value was defined. Solution: Fixed. Platforms tested: T3E (mcurie.nersc.gov)
* [svn-r2795] Elena Pourmal2000-11-031-2/+9
| | | | | | | | | | | | | | | | | | | Purpose: New feature Description: Now all Fortran flags such as H5F_ACC_RDONLY_F (previously defined in the H5fortran_flags.f90 file) are generated at runtime when h5init_fortran_f subroutine is called. All flags have now the same value as corresponding C flags. This change affects user's programming model: Every Fortran program that uses F90 HDF5 Library has to call h5init_fortran_f(error) subroutine before the first call to the F90 HDF5 Library and h5close_fortran_f(error) after the last call to the Library. h5init(close)_types_f calls are not needed anymore since F90 datatypes are intialized(closed) with the h5init(close)_fortran_f calls. Platforms tested: O2K and Solaris2.7
* [svn-r2648] Elena Pourmal2000-10-101-10/+14
| | | | | | | | | | | | | | | | | | | | | | Purpose: Reimplemented references to the objects and dataset regions. Description: Previous implementation was not portable. This implementation should work on UNIX workstations and Crays, but is very inefficient since it uses memcpy to repack Fortran buffers with references to C buffers and vice versa. Solution: I used fortran derived datatype with integer fields. h5dwrite_f and h5dread_f have extra parameter when references are written or read. This parameter describes size of the buffer that holds references. Platforms tested: J90 and Solaris 2.6 H5Pf.c Some of the functions do not exist now in the development branch. Commented those out, so one does not need to apply patch in order to build Fortran Library.
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