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* Fixed many -Wreserved-id-macro warnings by fixing header guard spelling
Removed leading underscore(s) from header guard spelling. Used 2 regexes:
` _H5(.*)_H`
` __H5(.*)_H`
Applied case-insensitively to only .h files.
* Modified scripts that generate header files to not use underscore prefix
Interestingly, there was already no leading underscore in the trailing comment at the end of the file
* Fixed remaining -Wreserved-id-macro warning not caught by regex
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* Modify temporary rpath for testing in java example scripts.
* Update URL in source file Copyright headers for web copy of COPYING
file - files not in src or test.
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hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
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copyright notice.
Tested platform:
Kagiso only since it is only a comment block change. If it works in one
machine, it should work in all, I hope. Still need to check the parallel
build on copper.
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Description: Added support for "big" REAL and DOUBLE PRECISION
datatypes (i.e. sizes of Fortran real and double precision
may be 8 and/or 16 bytes; usually specified by compilers
flags like -r8, -r16, -d8, etc.)
Solution: Added code to generate all necessary datatypes on a fly.
Platforms tested: heping with g95 (-r8, -d8)
mir with ifc (-r16, -r8)
Note: multi file test failed when REAL is 128 bit.
I will address this later.
Misc. update:
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Code cleanup
Description:
fortran/src/H5f90i.h used to define different fortran types for every
compiler. Now it only defines three things, and they are the
same for every platform but one.
Solution:
Eliminate duplicate definitions; now there are only two cases
("UNICOS" and "everything else").
This should also let the HDF5 Fortran compile anywhere, even on
unknown platforms.
Platforms tested:
mir, pommier, modi4, copper, Cray X1 (in progress)
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Cray X1 Port
Description:
Porting 1.7 branch to Cray X1. With these changes, HDF5 builds, but
there are some errors in the tests. Working on the errors.
Solution:
Added nv1-cray file to config directory.
Cleaned up some code in hl/c++ that was causing compiler to complain.
Platforms tested:
Cray X1, mir, sleipnir
Misc. update:
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Bug fix
Description:
Made High-Level Fortran code use automatically generated headers
rather than a separate hardcoded header.
Solution:
Set hdf5/hl/fortran/src to include hdf5/fortran/src, so that it
will find the copy of H5f90i.h in that directory.
Took #include "H5private.h" out of H5f90i.h (and moved it to files
that included H5f90i.h.
Platforms tested:
mir, modi4, pommier
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Configuration feature
Description:
Fortran integer types (not reals) are now automatically detected at
build-time.
Solution:
Two helper programs are used, one to detect what types the Fortran compiler
has access to, and one to generate header files for C and Fortran matching
up types.
Platforms tested:
mir, copper, modi4, pommier (last week)
Misc. update:
MANIFEST updated, H5f90fortran_types.f90 removed from configure.in, since
it is not longer generated by configure.
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Configuration feature
Description:
Different Fortran compilers mangle function names in different ways
(upper case, lower case, adding underscores). To link between
Fortran and C functions, we need to know what a given function's
name is under a given compiler.
Solution:
Use autoconf's FC_WRAPPERS check to determine the Fortran
naming scheme and define the FC_FUNC_ macro to name our
functions (in H5f90proto.h). Removed references to
our old FNAME macro, as well as flags that indicated whether
function names were upper or lower case.
Platforms tested:
mir, pommier, modi4, copper, more
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Bug fix
Description:
Belatedly chase change of hobj_ref_t in C APIs.
Platforms tested:
FreeBSD 4.10 (sleipnir) w/backward compatibility turned on
IRIX64 6.5 (modi4) w/FORTRAN
h5committest
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Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-)
Description:
Generally speaking, this is the "signed->unsigned" change to selections.
However, in the process of merging code back, things got stickier and stickier
until I ended up doing a big "sync the two branches up" operation. So... I
brought back all the "infrastructure" fixes from the development branch to the
release branch (which I think were actually making some improvement in
performance) as well as fixed several bugs which had been fixed in one branch,
but not the other.
I've also tagged the repository before making this checkin with the label
"before_signed_unsigned_changes".
Platforms tested:
FreeBSD 4.10 (sleipnir) w/parallel & fphdf5
FreeBSD 4.10 (sleipnir) w/threadsafe
FreeBSD 4.10 (sleipnir) w/backward compatibility
Solaris 2.7 (arabica) w/"purify options"
Solaris 2.8 (sol) w/FORTRAN & C++
AIX 5.x (copper) w/parallel & FORTRAN
IRIX64 6.5 (modi4) w/FORTRAN
Linux 2.4 (heping) w/FORTRAN & C++
Misc. update:
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Port
Description:
Initial work for supporting GNU FORTRAN/F95 on FreeBSD. I think I've
got things mostly set up correctly, but I'm getting an internal compiler
error on one of the FORTRAN sources, so I'm not going to add this configuration
to the daily tests yet.
Platforms tested:
FreeBSD 4.10 (sleipnir) w/GNU FORTRAN
Not tested in h5committest
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Bug fix
Description:
Correct/update detection of Linux platforms.
Also, refactor common code out of different architectures for Linux builds.
Platforms tested:
Linux 2.4 (verbena)
Too minor to require h5commitest
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Description: Added PGI Fortran support for Linux64 systems (x86_64)
Solution:
Platforms tested: AMD Opteron box at AMD Sunnyvale and verbena
with PGI and gcc compilers.
Misc. update:
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Purpose: Maintenance for MAC OSX
Description: Added support for Absoft Fortran compiler f95;
Ddefault compiler is set to IBM xlf.
Solution:
Platforms tested: pommier with xlf and Absoft f95 compilers
Misc. update:
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Purpose: Maintenance
Description: Fortran APIs MAC OS X port for IBM XL Fortran compiler
Solution: Brought back changes from 1.6 branch
Platforms tested: pommier, h5comittested; this time h5committest
complained about copperpp directory and didn't run;
tests on verbena and sol passed.
Misc. update:
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Code cleanup
Description:
Start stripping leftovers from HDF4 out of this file, working toward
getting everything defined at configure time, instead of depending on the
framework of ifdef's used in HDF4.
Platforms tested:
h5committest
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Updated, cleanup or added Copyright notice.
Platforms tested:
"h5committested"
Misc. update:
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Update
Description:
Revamped the configuration system. The configurations for the Fortran
and C++ libraries are no longer separate from the "main"
configuration system. This involved removing the "configure*" and
"aclocal.m4" files from the fortran/ and c++/ subdirectories. Also
merging settings in the config/ subdirectories into the main config/
subdirectory.
Fortran header files had to be modified a little for Linux. It was
checking if it was a Linux machine by some #defines, however with the
-std=c99 switch, these defines weren't there. I added a check for
some other ones which should be there whether the -std=c99 switch is
used or not.
Platforms tested:
Verbena (Fortran & C++)
Sol (Fortran & C++)
Copper (Fortran & C++)
Modi4 (Parallel, Fortran, & C++)
Misc. update:
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Purpose: IA64 (titan) cleanup and backing up previous change to the
H5f90global.f90 file
Description: We defined IA64 variable for C-stubs compilation
on IA64 systems. But system defines __ia64 and
it is better to use it as we do on all other systems.
Fortran test failed since global variable became undefined.
Solution: Removed -DIA64 and use __ia64 instead.
Somehow removal of COMMON statements from H5f90global.f90
caused errors on titan. Most of the global fortran variables became
undefined. I am not sure why it is happenning. It may be ecc compiler
or there is an error in the Fortran code. Since it may take some time
to track it, I decided to remove this change.
Platforms tested: titan, arabica
Misc. update:
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Purpose: Support for Fortran Absoft compiler on Linux
Description: Absoft has its own name translation rules
for the names of C functions called from Fortran
Solution: Added "if defined H5_ABSOFT" statement to the linux portion
of the H5f90i.h file to define correct translations.
For now, Fortran users who use ABSOFT fortran compiler have to specify
-DH5_ABSOFT flag for their C compiler.
Platforms tested: Remote laptop running SuSE8.1 with Absoft compiler,
verbena with icc and ifc just to make sure that
our current linux configuration still works.
Since it is a pure Linux change, I didn't test it on
other systems.
Misc. update:
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Purpose: Maintenance/code cleanup/fight with Windows Fortran DLLs
Description: While strugling with Fortran DLLs on Windows I noticed
some missing export definitions that are necessary
for exporting correctly data and functions.
Solution: Added missing definitions
Platforms tested: h5committested; Windows with MSVC++ and Visual Fortran
on Windows. Fortran DLLs partially work, only 2 tests
fail, but failure doesn't make any sense. To make
things worse, most of the C DLL tests start to fail when
Fortran is built. I am still investigating...
Misc. update:
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Purpose:
Fortran port to IA64
Description:
I brought back changes from 1.4 branch to support IA64 system.
Platforms tested:
IA64 (titan), Solaris 2.7 (arabica), Linux 2.2 (eirene) and IRIX64-6.5 (modi4)
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Purpose:
Code clean-up
Description:
Removed unused HAVE_XXXX macros from the H5f90i.h file.
Platforms tested:
HP-UX 11.00 (kelgia) and IRIX64-6.5 (modi4)
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Purpose:
Bug fix
Description:
For some unknown to myself reason I used 32-bit integer for INTEGER(HSIZE_T)
on Solaris platforms when 64-bit integers are available for both C and Fortran.
Solution:
Use long long type to describe h(s)size_t_f types
Platforms tested:
Solaris 2.7 ans 2.6
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Code cleanup
Description:
Cleanup compiler warnings found by the SGI compiler and gcc 3.0
Platforms tested:
FreeBSD 4.5 w/gcc 3.0 (hack) && IRIX64 (modi4)
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Purpose:
IBM SP F90 HDF5 Library port
Description:
Added necessary type definitions for the port
Platforms tested:
Tested only for 1.4. branch. 1.5 branch will be tested later.
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Purpose:
HDF5 Fortran90 port to HP 11.00
Description:
Added datatype definitions for HP 11.00
Solution:
Platforms tested:
HPUX 11.00 (opus)
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Adding the Fortran interface to the HDF5 library
Description:
Fortran is now a subdirectory of the HDF5 library tree.
Platforms tested:
Solaris and IRIX (O2K)
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