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* [svn-r19654] Description:Quincey Koziol2010-10-211-11/+11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring Coverity revisions from branch back to trunk, and clean up some other misc. compiler warnings also. r19500: Fix coverity items 1446 and 1447. Moved up calls to memset in test_cont in ohdr.c so the test never tries to close uninitialized locations. r19501: Fix coverity items 1398-1445. Various uninitialized variable errors in fheap.c. r19502: Fixed coverity issue 579 and some additional warnings in the file as well. r19503: Bug fix: This fix addressed the "RESOURCE_LEAK" problems #789 and 790, run 26 r19504: minor mods to try to keep coverity from flagging false positives. r19505: Fixed coverity issues 566 - 571. Declared variables that are passed to functions that use them as arrays to be arrays of size 1. Tested on: Mac OS X/32 10.6.4 (amazon) w/debug, production & parallel (h5committested on trunk)
* [svn-r17482] Scot Breitenfeld2009-09-151-5/+7
| | | | | | | | | | | | | | | Bug 1652 - h5lget_info_by_idx_f missing/broken functionalit * added returned val_sel, link_type and address that were missing In the process, fixed the integer type in H5lget_info_f for address and val_sel * wrote test for val_sel, address, and link_type returned values * to check address values added h5Oopen_by_addr_f function and test program. Tested: smirom (pgf90/pgcc, ifort/icc) linew jam (gcc/g95)
* [svn-r16776] Description:Scot Breitenfeld2009-04-171-0/+9
| | | | | | | | | Added APIs: H5D_mp_H5DGET_ACCESS_PLIST_F H5I_mp_H5IIS_VALID_F H5P_mp_H5PSET_CHUNK_CACHE_F H5P_mp_H5PGET_CHUNK_CACHE_F
* [svn-r15704] I changed the return values of H5Fget_obj_ids and ↵Raymond Lu2008-09-261-2/+2
| | | | | | | | H5Fget_obj_count to ssize_t and modified C++ and Fortran API functions. This is for bug #1245. Tested on smirom, linew, and kagiso.
* [svn-r15628] Description:Quincey Koziol2008-09-161-158/+158
| | | | | | | | | | | | | Remove trailing whitespace from C/C++ source files, with the following script: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Tested on: Mac OS X/32 10.5.5 (amazon) No need for h5committest, just whitespace changes...
* [svn-r15378] Description:Scot Breitenfeld2008-07-161-126/+126
| | | | Added optional parameter "mounted" to H5Gget_info_f, H5Gget_info_by_idx_f, H5Gget_info_by_name_f
* [svn-r15233] Description:Scot Breitenfeld2008-06-181-0/+2
| | | | | Added the function h5tget_native_type and associated requirements.
* [svn-r14991] Maintenance: Fixed some bugs discovered by daily testing and by ↵Elena Pourmal2008-05-131-1/+1
| | | | | | | | manual testing using -i8 flag Platforms tested: linew (as for daily tests), icc and pgf90 with -i8 on kagiso; g95 has the problem with -i8 (will be looking into the problem)
* [svn-r14958] Cosmetic changes and fixed integer type mismatch in C routine ↵Scot Breitenfeld2008-05-091-1/+1
| | | | wrapper.
* [svn-r14941] Maintenance: Cleaned up more test code, fixed more bugs in the ↵Elena Pourmal2008-05-061-1/+1
| | | | | | | | test and source codes. This check-in should address Fortran failures on liberty and smirom. Platforms tested: kagiso with Intel, smirom with g95 -fPIC, liberty with gfortran42
* [svn-r14930] Maintenance: Fixed more bugs/typos and enabled tests that were ↵Elena Pourmal2008-05-051-4/+4
| | | | | | | | | | failing previously on linew. Currently only one test (dense attributes) is failing. It looks like C library problem and we have a similar bug report in Bugzilla: when dense storage is used, attributes are not written to the file; somehow similar C test doesn't expose the problem while Fortran test does. Platforms tested: linew, kagiso with g95 and PGI
* [svn-r14928] Maintenance: Cleaned up the code to make it compile on smirom ↵Elena Pourmal2008-05-041-4/+4
| | | | | | | | with the g95 compiler Platforms tested: kagiso with PGI compilers, linew, smirom with GCC and g95 compilers; some tests and function calls are commented out with !EP string; we will be working on it.
* [svn-r14923] Maintenance: This check-in merges changes from the fortran_1_8 ↵Elena Pourmal2008-05-031-20/+233
| | | | | | | branch back into the trunk (up to revision 14921) Platforms tested: kagiso with g95 and Intel compilers; more testing will be done after checking in a fresh copy from the trunk. New code itself was tested with all Fortran compilers available at THG
* [svn-r14903] Undoing change committed in r14902.Scot Breitenfeld2008-04-301-233/+20
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* [svn-r14902] Merged fortran_1_8 branch changes r14505:14901 into the trunk. ↵Scot Breitenfeld2008-04-301-20/+233
| | | | New fortran wrappers added.
* [svn-r13253] Updated all C and C++ style source code files with the THG ↵Albert Cheng2007-02-071-2/+3
| | | | | | | | | copyright notice. Tested platform: Kagiso only since it is only a comment block change. If it works in one machine, it should work in all, I hope. Still need to check the parallel build on copper.
* [svn-r12765] Description:Elena Pourmal2006-10-161-27/+27
| | | | | | | | | | Daily tests failed for Absoft f95 compiler Solution: Failure was due to several typos in H5f90prpto.h file; fixed I also removed redundant flags from the configration files. Platforms tested: heping with f95, g95, pgf90; pommier with f95
* [svn-r12752] Descripton: This is a port to G95 compiler for MAC OSX and AIX 5.2Elena Pourmal2006-10-121-5/+317
| | | | | | | | | | | | | | | | Previous implementation failed to compile on MAC OS X Tiger 10.4 and AIX 5.2 In previous implementation, each overloaded Fortran function called the same C function. Since declaration of parameters in INTERFACE block for C Function differed, some compilers issued warnings but g95 on MAC and AIX failed to compile. Solution: Add C wrappers corresponding to each overloaded Fortran function to call C stub function. This fix should also reduce number of warnings on IRIX systems. Platforms tested: MAC OS and AIX 5.2 (copper) with g95; sol (with Sun compilers), heping with PGI compilers
* [svn-r12053] Purpose: VMS portElena Pourmal2006-03-091-0/+4
| | | | | | | | | | | | Description: defined H5_FC_FUNC_(name, NAME) for VMS since we cannot run autoconf on that system Solution: Used append methos to form the string; this may become the change for all platforms after more testing Platforms tested: heping, VMS server Misc. update:
* [svn-r11245] Purpose:Quincey Koziol2005-08-131-24/+24
| | | | | | | | | | | | | | | | | | | | Code cleanup Description: Trim trailing whitespace, which is making 'diff'ing the two branches difficult. Solution: Ran this script in each directory: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r11144] Purpose:Quincey Koziol2005-07-231-1/+1
| | | | | | | | | | | New port Description: Elena asked me to check in her NEC SX-6 work, so here it is! :-) Platforms tested: FreeBSD 4.11 (sleipnir) NEC SX-6 (by Elena)
* [svn-r10970] Purpose: New feature/bug #350 fixElena Pourmal2005-06-221-2/+2
| | | | | | | | | | | | | | | | | | | | Description: When compiler flag was used to set the size of Fortran integer to 8 bytes, library would fail. Solution: Cleaned up the code; added detection of Fortran INTEGER type size and appropriately defined int_f type for C-stubs routines. Platforms tested: Solaris 2.8 32 and 64-bit, AIX 5.1 64-bit parallel PGI Fortran with -i8 flag on heping Absoft Fortran with -i8 flag on heping g95 on mir (Fortran integer is 8 bytes by default that cannot be changed - compiler bug ;-) AIX Fortran with -qintsize=8 32 and 64-bit modes on copper Misc. update:
* [svn-r10657] Purpose:James Laird2005-04-251-1/+1
| | | | | | | | | | | | | | | | | | | | Configuration feature Description: Fortran integer types (not reals) are now automatically detected at build-time. Solution: Two helper programs are used, one to detect what types the Fortran compiler has access to, and one to generate header files for C and Fortran matching up types. Platforms tested: mir, copper, modi4, pommier (last week) Misc. update: MANIFEST updated, H5f90fortran_types.f90 removed from configure.in, since it is not longer generated by configure.
* [svn-r10585] Purpose: Bug fixElena Pourmal2005-04-101-1/+2
| | | | | | | | | | | | | Description: h5pget_driver_f function returned information that could not be interpreted by fortran application Solution: Defined Fortran global variables that correspond to the C H5FD_<driver_name> variables at the Fortran library initialization time. Platforms tested: heping with PGI compilers, sol 64-bit and copper parallel Misc. update:
* [svn-r10571] Purpose:James Laird2005-04-071-291/+291
| | | | | | | | | | | | Improvement Description: Changed headers in Fortran directories to use H5_FC_FUNC macro from H5pubconf.h rather than FC_FUNC macro from H5config.h. This is better practice and works better with the Windows projects. Platforms tested: heping, Windows
* [svn-r10561] Purpose: MaintenanceElena Pourmal2005-04-061-0/+2
| | | | | | | | | | | Description: Added missing h5get_member_class_f function Solution: Platforms tested: heping; it is a simple change. I will watch daily tests and take care of failures. Misc. update:
* [svn-r10534] Purpose:James Laird2005-04-041-649/+303
| | | | | | | | | | | | | | | | | | | | Configuration feature Description: Different Fortran compilers mangle function names in different ways (upper case, lower case, adding underscores). To link between Fortran and C functions, we need to know what a given function's name is under a given compiler. Solution: Use autoconf's FC_WRAPPERS check to determine the Fortran naming scheme and define the FC_FUNC_ macro to name our functions (in H5f90proto.h). Removed references to our old FNAME macro, as well as flags that indicated whether function names were upper or lower case. Platforms tested: mir, pommier, modi4, copper, more
* [svn-r9838] Purpose:Quincey Koziol2005-01-191-2/+2
| | | | | | | | | | | | | | | | | | Bug fix Description: Correctly retire the H5E_LEN setting, now that the FORTRAN and C++ APIs have been corrected to not use it either. Solution: Pass in the string buffer length for FORTRAN In the C++ API, call H5Eget_msg() in a manner similar to the way H5Fget_name() is called. Platforms tested: Linux 2.4 (heping) w/FORTRAN & C++ Solaris 2.7 (arabica) w/FORTRAN & C++
* [svn-r9801] Purpose:Quincey Koziol2005-01-101-5/+5
| | | | | | | | | | | | Bug fix Description: Belatedly chase change of hobj_ref_t in C APIs. Platforms tested: FreeBSD 4.10 (sleipnir) w/backward compatibility turned on IRIX64 6.5 (modi4) w/FORTRAN h5committest
* [svn-r9727] Purpose:Quincey Koziol2004-12-291-373/+119
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-) Description: Generally speaking, this is the "signed->unsigned" change to selections. However, in the process of merging code back, things got stickier and stickier until I ended up doing a big "sync the two branches up" operation. So... I brought back all the "infrastructure" fixes from the development branch to the release branch (which I think were actually making some improvement in performance) as well as fixed several bugs which had been fixed in one branch, but not the other. I've also tagged the repository before making this checkin with the label "before_signed_unsigned_changes". Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel & fphdf5 FreeBSD 4.10 (sleipnir) w/threadsafe FreeBSD 4.10 (sleipnir) w/backward compatibility Solaris 2.7 (arabica) w/"purify options" Solaris 2.8 (sol) w/FORTRAN & C++ AIX 5.x (copper) w/parallel & FORTRAN IRIX64 6.5 (modi4) w/FORTRAN Linux 2.4 (heping) w/FORTRAN & C++ Misc. update:
* [svn-r9154] Elena Pourmal2004-08-251-0/+3
| | | | | | | | | | | | Purpose: Maintenance/bug fixes (OSF1 C++ and missing Fortran APIs) Description: bringing 1.6 changes to 1.7 Solution: Platforms tested: OSF1, Solaris 2.8, AIX5.1 Misc. update:
* [svn-r8836] Elena Pourmal2004-07-081-0/+6
| | | | | | | | | | | | | | | | | Purpose: Maintenance Description: Added h5fget_name_f and h5fget_filesize_f subroutines and tests. Solution: N/A Platforms tested: arabica (32-bit), sol (64-bit) parallle build on copper failed for the C library with the the following error: ld: 0711-317 ERROR: Undefined symbol: .H5FD_stdio_term Since this change doesn't affect the C library, I am cheking it in and will retest the fresh CVS copy after this check-in. Misc. update:
* [svn-r8817] Purpose:Xuan Bai2004-07-071-1/+1
| | | | | | | | | | | | | | | | | | Bug Fix. Description: nh5zget_filter_info_c function was not declcared as H5_FCDLL, which is required for fortran dll in Windows. _H5ZGET_FILTER_INFO_C is considered as an unresolved external symbol by Fortran Compiler in Windows without H5_FCDLL. Solution: Added H5_FCDLL for nh5zget_filter_info_c function. Platforms tested: DEC Fortran 6.0 in Windows XP. Misc. update:
* [svn-r8781] James Laird2004-07-011-0/+2
| | | | | | | | | | | | | | | | Purpose: HDF5 now supports SZIP with no encoder. Description: SZIP can be configured to have both encoder and decoder or just to have the decoder. HDF5 can now query the configuration of any filter, and will throw errors if users try to write using a filter with encoding disabled. Solution: Added H5Zget_filter_info function, changed API for H5Pget_filter and H5P_get_filter_by_id. See SZIP RFC. Platforms tested: Copper (fortran, C++, parallel), Sleipnir (C++), Arabica (fortran, C++), Verbena (fortran, C++) Misc. update:
* [svn-r8468] Purpose:MuQun Yang2004-05-031-290/+290
| | | | | | | | | | | | | | | | | Fixing Fortran DLL on windows Description: Need to use another macro H5_FCDLL to build fortran C stub library. change all H5_DLL to H5_FCDLL in file H5fproto.h. Solution: see above. Platforms tested: eirene(fortran), arabica(fortan) Misc. update:
* [svn-r8404] Elena Pourmal2004-04-221-36/+1
| | | | | | | | | | | | | | | | | Purpose: Maintenance Description: h5dwrite/read_f and h5awrite_read_f functions were overloaded with dims argument being of type INTEGER and INTEGER(HSIZE_T). We promised to remove overloading in 1.4 release. It was removed from documentation but not from the source code. Solution: Finish code cleanup. Platforms tested: Solaris 2.7 32 and 64 bit, and copper with --enable- parallel. Windows are broken, so Kent and Xuan will test it with their changes later. Misc. update:
* [svn-r8149] Pedro Vicente Nunes2004-02-041-3/+3
| | | | | | | | | | | | | | Purpose: replaced name of delete filter with remove filter for the new function H5Premove_filter Description: Solution: Platforms tested: linux Misc. update:
* [svn-r8117] Purpose:Quincey Koziol2004-01-271-0/+4
| | | | | | | | | | | | | Code cleanup Description: Add C++ and FORTRAN wrappers for new H5Pdelete_filter routine, along with documentation and a note in the release notes. Platforms tested: FreeBSD 4.9 (sleipnir) Linux 2.4 (verbena) w/ C++ and FORTRAN Too minor for full h5committest
* [svn-r7934] Purpose:Quincey Koziol2003-12-111-0/+9
| | | | | | | | | | | Add new feature Description: Add FORTRAN wrappers for new H5I routines. Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
* [svn-r7643] Purpose:Quincey Koziol2003-10-151-26/+9
| | | | | | | | | | Code cleanup Description: Clean up warnings, remove unused routines, tidy things up a lot. Platforms tested: h5committest
* [svn-r7621] Elena Pourmal2003-10-131-2/+2
| | | | | | | | | | | | | Purpose: Rolling over changes from 1.6 branch Description: h5pget(set)_cache_f functions had a wrong type of the third parameter Solution: Fixed the type to be INTEGER(SIZE_T) Platforms tested: kelgia, arabica 64-bit, copper 64-bit Misc. update:
* [svn-r7612] Purpose:Quincey Koziol2003-10-131-1/+20
| | | | | | | | | | | | Code cleanup Description: Added missing prototypes. Platforms tested: FreeBSD 4.9 (sleipnir) Linux 2.4 (verbena) w/FORTRAN too minor for h5committest
* [svn-r7601] Elena Pourmal2003-10-101-1/+1
| | | | | | | | | | | | | | Purpose: Bug fix Description: Parameter rdcc_nelmts of the h5pget_cache_f subroutine had wrong INTEGER(SIZE_T) instead of INTEGER type. Solution: Fixed the type Platforms tested: arabica in 64-bit mode (where INTEGER(SIZE_T) is not the same as INTEGER) Misc. update:
* [svn-r7559] Purpose:Quincey Koziol2003-10-071-8/+7
| | | | | | | | | | | | | | Add feature Description: Add H5Fget_freespace() routine, to check the amount of free space in a file. This information is only valid until the file is closed currently, however (until we start recording the free space information in the file itself). Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
* [svn-r7341] Purpose:Albert Cheng2003-08-111-12/+12
| | | | | | | | | Updated, cleanup or added Copyright notice. Platforms tested: "h5committested" Misc. update:
* [svn-r7295] Purpose:Quincey Koziol2003-08-081-1/+1
| | | | | | | | | | Code cleanup Description: Removed unused and out of date H5E flags Platforms tested: h5committested
* [svn-r7181] Purpose:Quincey Koziol2003-07-071-8/+0
| | | | | | | | | | | Version update Description: Removed 1.4 compatibility code in the library. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7059] Purpose:Quincey Koziol2003-06-181-1/+1
| | | | | | | | | | | Refactoring Description: Track changes to H5Fget_obj_<foo> API functions. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r6950] Purpose:Quincey Koziol2003-06-041-1/+1
| | | | | | | | | | | | | | | | | | | | | | API tweak. Description: The H5Sget_select_bounds() API call was using hsize_t arrays for retrieving the 'start' and 'end' coordinates, which is counter to the rest of the dataspace API. Solution: Change the arrays to be hssize_t instead. Platforms tested: FreeBSD 4.8 (sleipnir) w/C++ FreeBSD 4.8 (sleipnir) w/parallel h5committested Misc. update: Updated all docs for this change. Added 1.4 compatibility #ifdef's
* [svn-r6820] Elena Pourmal2003-05-061-0/+8
| | | | | | | | | | | | | | | Purpose: Fortran updtae Description: Created new functions h5pset(get)_fapl_mpiposix_f Platforms tested: Compilation was tested with semi-manual h5committest. (I ahd to built and test manullay on modi4 parallel because of some weird failure of h5committest on modi4) There are no tests yet for those functions. Kent was going to use them in the MEAD project to test the performance. Misc. update:
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