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* [svn-r10534] Purpose:James Laird2005-04-041-649/+303
| | | | | | | | | | | | | | | | | | | | Configuration feature Description: Different Fortran compilers mangle function names in different ways (upper case, lower case, adding underscores). To link between Fortran and C functions, we need to know what a given function's name is under a given compiler. Solution: Use autoconf's FC_WRAPPERS check to determine the Fortran naming scheme and define the FC_FUNC_ macro to name our functions (in H5f90proto.h). Removed references to our old FNAME macro, as well as flags that indicated whether function names were upper or lower case. Platforms tested: mir, pommier, modi4, copper, more
* [svn-r9838] Purpose:Quincey Koziol2005-01-191-2/+2
| | | | | | | | | | | | | | | | | | Bug fix Description: Correctly retire the H5E_LEN setting, now that the FORTRAN and C++ APIs have been corrected to not use it either. Solution: Pass in the string buffer length for FORTRAN In the C++ API, call H5Eget_msg() in a manner similar to the way H5Fget_name() is called. Platforms tested: Linux 2.4 (heping) w/FORTRAN & C++ Solaris 2.7 (arabica) w/FORTRAN & C++
* [svn-r9801] Purpose:Quincey Koziol2005-01-101-5/+5
| | | | | | | | | | | | Bug fix Description: Belatedly chase change of hobj_ref_t in C APIs. Platforms tested: FreeBSD 4.10 (sleipnir) w/backward compatibility turned on IRIX64 6.5 (modi4) w/FORTRAN h5committest
* [svn-r9727] Purpose:Quincey Koziol2004-12-291-373/+119
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-) Description: Generally speaking, this is the "signed->unsigned" change to selections. However, in the process of merging code back, things got stickier and stickier until I ended up doing a big "sync the two branches up" operation. So... I brought back all the "infrastructure" fixes from the development branch to the release branch (which I think were actually making some improvement in performance) as well as fixed several bugs which had been fixed in one branch, but not the other. I've also tagged the repository before making this checkin with the label "before_signed_unsigned_changes". Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel & fphdf5 FreeBSD 4.10 (sleipnir) w/threadsafe FreeBSD 4.10 (sleipnir) w/backward compatibility Solaris 2.7 (arabica) w/"purify options" Solaris 2.8 (sol) w/FORTRAN & C++ AIX 5.x (copper) w/parallel & FORTRAN IRIX64 6.5 (modi4) w/FORTRAN Linux 2.4 (heping) w/FORTRAN & C++ Misc. update:
* [svn-r9154] Elena Pourmal2004-08-251-0/+3
| | | | | | | | | | | | Purpose: Maintenance/bug fixes (OSF1 C++ and missing Fortran APIs) Description: bringing 1.6 changes to 1.7 Solution: Platforms tested: OSF1, Solaris 2.8, AIX5.1 Misc. update:
* [svn-r8836] Elena Pourmal2004-07-081-0/+6
| | | | | | | | | | | | | | | | | Purpose: Maintenance Description: Added h5fget_name_f and h5fget_filesize_f subroutines and tests. Solution: N/A Platforms tested: arabica (32-bit), sol (64-bit) parallle build on copper failed for the C library with the the following error: ld: 0711-317 ERROR: Undefined symbol: .H5FD_stdio_term Since this change doesn't affect the C library, I am cheking it in and will retest the fresh CVS copy after this check-in. Misc. update:
* [svn-r8817] Purpose:Xuan Bai2004-07-071-1/+1
| | | | | | | | | | | | | | | | | | Bug Fix. Description: nh5zget_filter_info_c function was not declcared as H5_FCDLL, which is required for fortran dll in Windows. _H5ZGET_FILTER_INFO_C is considered as an unresolved external symbol by Fortran Compiler in Windows without H5_FCDLL. Solution: Added H5_FCDLL for nh5zget_filter_info_c function. Platforms tested: DEC Fortran 6.0 in Windows XP. Misc. update:
* [svn-r8781] James Laird2004-07-011-0/+2
| | | | | | | | | | | | | | | | Purpose: HDF5 now supports SZIP with no encoder. Description: SZIP can be configured to have both encoder and decoder or just to have the decoder. HDF5 can now query the configuration of any filter, and will throw errors if users try to write using a filter with encoding disabled. Solution: Added H5Zget_filter_info function, changed API for H5Pget_filter and H5P_get_filter_by_id. See SZIP RFC. Platforms tested: Copper (fortran, C++, parallel), Sleipnir (C++), Arabica (fortran, C++), Verbena (fortran, C++) Misc. update:
* [svn-r8468] Purpose:MuQun Yang2004-05-031-290/+290
| | | | | | | | | | | | | | | | | Fixing Fortran DLL on windows Description: Need to use another macro H5_FCDLL to build fortran C stub library. change all H5_DLL to H5_FCDLL in file H5fproto.h. Solution: see above. Platforms tested: eirene(fortran), arabica(fortan) Misc. update:
* [svn-r8404] Elena Pourmal2004-04-221-36/+1
| | | | | | | | | | | | | | | | | Purpose: Maintenance Description: h5dwrite/read_f and h5awrite_read_f functions were overloaded with dims argument being of type INTEGER and INTEGER(HSIZE_T). We promised to remove overloading in 1.4 release. It was removed from documentation but not from the source code. Solution: Finish code cleanup. Platforms tested: Solaris 2.7 32 and 64 bit, and copper with --enable- parallel. Windows are broken, so Kent and Xuan will test it with their changes later. Misc. update:
* [svn-r8149] Pedro Vicente Nunes2004-02-041-3/+3
| | | | | | | | | | | | | | Purpose: replaced name of delete filter with remove filter for the new function H5Premove_filter Description: Solution: Platforms tested: linux Misc. update:
* [svn-r8117] Purpose:Quincey Koziol2004-01-271-0/+4
| | | | | | | | | | | | | Code cleanup Description: Add C++ and FORTRAN wrappers for new H5Pdelete_filter routine, along with documentation and a note in the release notes. Platforms tested: FreeBSD 4.9 (sleipnir) Linux 2.4 (verbena) w/ C++ and FORTRAN Too minor for full h5committest
* [svn-r7934] Purpose:Quincey Koziol2003-12-111-0/+9
| | | | | | | | | | | Add new feature Description: Add FORTRAN wrappers for new H5I routines. Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
* [svn-r7643] Purpose:Quincey Koziol2003-10-151-26/+9
| | | | | | | | | | Code cleanup Description: Clean up warnings, remove unused routines, tidy things up a lot. Platforms tested: h5committest
* [svn-r7621] Elena Pourmal2003-10-131-2/+2
| | | | | | | | | | | | | Purpose: Rolling over changes from 1.6 branch Description: h5pget(set)_cache_f functions had a wrong type of the third parameter Solution: Fixed the type to be INTEGER(SIZE_T) Platforms tested: kelgia, arabica 64-bit, copper 64-bit Misc. update:
* [svn-r7612] Purpose:Quincey Koziol2003-10-131-1/+20
| | | | | | | | | | | | Code cleanup Description: Added missing prototypes. Platforms tested: FreeBSD 4.9 (sleipnir) Linux 2.4 (verbena) w/FORTRAN too minor for h5committest
* [svn-r7601] Elena Pourmal2003-10-101-1/+1
| | | | | | | | | | | | | | Purpose: Bug fix Description: Parameter rdcc_nelmts of the h5pget_cache_f subroutine had wrong INTEGER(SIZE_T) instead of INTEGER type. Solution: Fixed the type Platforms tested: arabica in 64-bit mode (where INTEGER(SIZE_T) is not the same as INTEGER) Misc. update:
* [svn-r7559] Purpose:Quincey Koziol2003-10-071-8/+7
| | | | | | | | | | | | | | Add feature Description: Add H5Fget_freespace() routine, to check the amount of free space in a file. This information is only valid until the file is closed currently, however (until we start recording the free space information in the file itself). Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
* [svn-r7341] Purpose:Albert Cheng2003-08-111-12/+12
| | | | | | | | | Updated, cleanup or added Copyright notice. Platforms tested: "h5committested" Misc. update:
* [svn-r7295] Purpose:Quincey Koziol2003-08-081-1/+1
| | | | | | | | | | Code cleanup Description: Removed unused and out of date H5E flags Platforms tested: h5committested
* [svn-r7181] Purpose:Quincey Koziol2003-07-071-8/+0
| | | | | | | | | | | Version update Description: Removed 1.4 compatibility code in the library. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7059] Purpose:Quincey Koziol2003-06-181-1/+1
| | | | | | | | | | | Refactoring Description: Track changes to H5Fget_obj_<foo> API functions. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r6950] Purpose:Quincey Koziol2003-06-041-1/+1
| | | | | | | | | | | | | | | | | | | | | | API tweak. Description: The H5Sget_select_bounds() API call was using hsize_t arrays for retrieving the 'start' and 'end' coordinates, which is counter to the rest of the dataspace API. Solution: Change the arrays to be hssize_t instead. Platforms tested: FreeBSD 4.8 (sleipnir) w/C++ FreeBSD 4.8 (sleipnir) w/parallel h5committested Misc. update: Updated all docs for this change. Added 1.4 compatibility #ifdef's
* [svn-r6820] Elena Pourmal2003-05-061-0/+8
| | | | | | | | | | | | | | | Purpose: Fortran updtae Description: Created new functions h5pset(get)_fapl_mpiposix_f Platforms tested: Compilation was tested with semi-manual h5committest. (I ahd to built and test manullay on modi4 parallel because of some weird failure of h5committest on modi4) There are no tests yet for those functions. Kent was going to use them in the MEAD project to test the performance. Misc. update:
* [svn-r6790] Elena Pourmal2003-05-011-0/+2
| | | | | | | | | | | | | | | | | | | Purpose: Maintenance/code cleanup/fight with Windows Fortran DLLs Description: While strugling with Fortran DLLs on Windows I noticed some missing export definitions that are necessary for exporting correctly data and functions. Solution: Added missing definitions Platforms tested: h5committested; Windows with MSVC++ and Visual Fortran on Windows. Fortran DLLs partially work, only 2 tests fail, but failure doesn't make any sense. To make things worse, most of the C DLL tests start to fail when Fortran is built. I am still investigating... Misc. update:
* [svn-r6684] Elena Pourmal2003-04-151-2/+53
| | | | | | | | | | | | | | | | | | | Purpose: Added copyright statement; cleaned code and fixed bugs for Windows and Cray T90IEEE Description: Fortran files did not have copyright statement; VL types did not work on T90IEEE since I never brought the correct code from 1.4 branch; there were compilation warnings on Windows; some character parameters were not passed correctly to C stubs causing tests to fail on Windows. Solution: Added copyright statement and clean the code. Platforms tested: CRAY T90IEEE, arabica, modi4 with parallel, Windows 2000 Only static tests (both debug and release) passed on Windows. DLLs have multiple problems ;-) Misc. update:
* [svn-r6641] Elena Pourmal2003-04-121-1/+15
| | | | | | | | | | | | | | | | | | Purpose: Catching up with C library Description: I added four new functions h5pset_szip_f h5pget_filter_by_id_f h5pmodify_filetr_f h5pall_filters_avail_f Solution: Platforms tested: arabica (with and without SZIP Library), modi4 (with SZIP and parallel) burrwhite (with SZIP and PGI C and Fortran compilers) Misc. update:
* [svn-r6602] Purpose:Quincey Koziol2003-04-091-1/+1
| | | | | | | | | | | | | | | | | | Code cleanup Description: Adjusted parameters for fortran wrappers of H5Pset_shuffle to match the changes to the C API function. Solution: Platforms tested: FreeBSD 4.8 (sleipnir) w/szip Linux 2.4 (sleipnir) w/szip Solaris 2.7 (arabica) w/FORTRAN IRIX64 6.5 (modi4) w/szip, FORTRAN & parallel Misc. update:
* [svn-r6573] Elena Pourmal2003-04-021-0/+16
| | | | | | | | | | | | | | Purpose: Maintenance Description: New fortran APIs h5pset_fapl_multi and h5pget_fapl_multi have been added Solution: Platforms tested: burrwhite with PGI compilers, arabica and modi4 with --enable-parallel Misc. update:
* [svn-r6494] Elena Pourmal2003-03-191-47/+92
| | | | | | | | | | | | | | | | | | | | | Purpose: Catching up with the C library Description: Added the follwoing new fortran functions h5iget_name_f h5tis_variavle_str_f h5zunregister_f h5zfilter_avail_f h5pset_shuffle_f h5pset_fletcher32 h5pset_edc_check_f h5pget_edc_check_f h5dfill_f Solution: Platforms tested: arabica(C and F90), burrwhite (pgcc and pgf90), modi4 (F90 and parallel) Misc. update:
* [svn-r6464] Elena Pourmal2003-03-051-1/+181
| | | | | | | | | | | | | | | | | | Purpose: Maintenance Description: * Added support for generic properties. * Added support for time allocation properties. * Added support for variable length datatypes (only datatypes based on INTEGER, REAL and CHARACTER Fortran types are supported). * added some missing functions Solution: I am checking in new Fortran APIs and their man pages to support 1.5 features listed above. Not all APIs have tests yet. APIs were written in Fall 2002, and I am afraid that I will loose the code or totally forget what I did if I wait longer. ;-) Platforms tested: arabica (fortran), eirene (fortran), modi4 (parallel, fortran)
* [svn-r5958] Elena Pourmal2002-10-021-0/+6
| | | | | | | | | | | | | | Purpose: Added missing fortran functions h5set(get)_buffer_f. Also added docs and tests for them. Solution: Currently functions do not accept conversion and background buffers. This corresponds to H5set(get)_buffer call with buffer pointers set to NULL. If there is a demand, I can overload the functions to have new parameters and go through all trouble creating functions for all supported datatypes. Platforms tested: Solaris 2.7, Linux 2.2., IRIX64-6.5
* [svn-r5956] Elena Pourmal2002-10-011-1/+26
| | | | | | | | | | | | | | | | | | Purpose: Added new F90 APIs Description: I added new F90 APIs, tests, and documentation for the following functions: h5fget_obj_count_f h5pequal_f h5tget_member_index_f h5fget_obj_ids_f h5pget_fclose_degree_f h5pset_fclose_degree_f Documentation for exisiting functions was missing: h5freopen_f, h5fflush_f, h5fmount_f, h5unmount_f, h5fget_create_plist_f, h5fget_access_plist_f. Platforms tested: Solaris 2.7, Linux 2.2 and IRIX64-6.5
* [svn-r5948] Elena Pourmal2002-09-251-0/+10
| | | | | | | | | | Purpose: Added new fortran functions Description: Source code, tests and documentation for h5glink2_f and h5gmove2_f functions were added. I also added missing man page for h5glink_f Platforms tested: Solaris 2.7, IRIX64-6.5 and Liniux 2.2
* [svn-r5946] Elena Pourmal2002-09-241-1/+17
| | | | | | | | | | | | | | Purpose: Added missing fortran functions. Description: Four Library Fortran API functions have been added: h5get_libversion_f, h5_check_version_f, h5garbage_collect_f and h5dont_atexit_f. Only first two functions were tested. Documentation file and RELEASE.txt were updated. Platforms tested: Solaris 2.7, IRIX64-6.5 and Linux 2.2
* [svn-r5935] Elena Pourmal2002-09-211-201/+201
| | | | | | | | | | | | Purpose: Bug fix Description: _DLL_ macro was not replaced by H5_DLL macro in the Fortran stabs header file when it was replaced in the C header files. Solution: Replace it. Platforms tested: Tested on Solairs 2.7 with --enable-fortran --enable-cxx flags.
* [svn-r5066] Elena Pourmal2002-03-141-1/+1
| | | | | | | | | | | | | Purpose: Bug fix Description: I borrowed function HDpackFstring from the HDF4 Library and left name unchanged. It causes linking problems for Fortran users that use both HDF4 and HDF5 Libraries in their applications. Solution: Changed the name to be HD5packFstring Platforms tested: Solaris 2.7
* [svn-r4866] Elena Pourmal2002-01-261-1/+1
| | | | | | | | | | | | Purpose: Maintenance Description: Several compiler's warnings caused Hitachi SR8000 F90 and C compilers to fail. Solution: Fixed the code to eliminate warnings. Platforms tested: O2K (modi4) and Solaris 2.7 (arabica)
* [svn-r4326] Purpose:Quincey Koziol2001-08-101-1/+1
| | | | | | | | | | Code cleanups, mostly.. Description: Work on pacifying the SGI compiler to get the generic properties working correctly with --enable-parallel and --enable-fortran. It's not quite fixed yet, but I need to head home and these patches help... :-/ Platforms tested: IRIX64 6.5 (modi4)
* [svn-r3860] Elena Pourmal2001-04-271-211/+211
| | | | | | | | | | | | | | | | | | | | | | Purpose: Windows port Description: Multiple changes: * Windows platforms require special compiler directives in order to create DLLs. * In read/write subroutines data arrays were passed by descriptor. This worked on UNIX but did not work on Windows. Solution: * added compiler directives. * read/write APIs have been changed. There is an additional parameter (array that contains the sizes of data buffer dimensions) and regular arrays are used instead of assumed-shaped arrays. Platforms tested: * Currently this feature does not work. Common blocks are not exported correctly from one F90 module to another. I am checking this in so I can ask DEC for help. * For static library tests passed on Windows 98 ( except flush2_fortran) All tests passed on Linux, Solaris 2.7, O2K and T3E
* [svn-r3649] Elena Pourmal2001-03-161-31/+31
| | | | | | | | | | | | | | | | | | Purpose: Windows port and maintenance Description: Each C function called from F90 subroutine requires explicit interface. Some drivers functions were not implemented. Solution: Added interfaces and comment blocks to each F90 subroutine. Added the following subroutines: h5pset(get)_fapl_core_f h5pset(get)_fapl_family_f h5pset_fapl_sec2_f h5pset_fapl_stdio_f Platforms tested: Linux (eirene) to make sure that code still works on UNIX. More UNIX platforms will be tested before moving to Windows.
* [svn-r3055] Elena Pourmal2000-12-011-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | Purpose: Bug fix on T3E. Description: There was a typo in the h5init_types_c name translation line that caused compilation errors. Solution: Fixed the typo. This fix exposes another error and I have no clue what to do about this one f90 -p. -p../src -dp -o fortranlib_test fortranlib_test.o hdf5test.o tH5F.o tH5D.o tH5R.o tH5S.o tH5T.o tH5Sselect.o tH5P.o tH5A.o tH5I.o tH5G.o ../src/.libs/libhdf5_fortran.a ../../src/.libs/libhdf5.a -L/u3/epourmal/HDF4/NewHDF/lib -lmfhdf -ldf -ljpeg -lz -lnsl -lm cld-405 cld: WARNING The entry point `HDF5' defined in relocatable object `../src/.libs/libhdf5_fortran.a[HDF5.o:HDF5]' is used; the definition in relocatable object `./../src/HDF5.o:HDF5' is ignored. cld-431 cld: WARNING The resulting output file `fortranlib_test' is not executable because of previous WARNING messages. Make: "../../libtool --mode=link f90 -p. -p../src -dp -o fortranlib_test fortranlib_test.lo hdf5test.lo tH5F.lo tH5D.lo tH5R.lo tH5S.lo tH5T.lo tH5Sselect.lo tH5P.lo tH5A.lo tH5I.lo tH5G.lo ../src/libhdf5_fortran.la ../../src/libhdf5.la": Error code 1 cmd-2436 make: Stop. + exit 1 Make: "set -x; for d in src test examples; do \ (cd $d && make tests) || exit 1; \ done": Error code 1 Platforms tested: T3E
* [svn-r2975] Elena Pourmal2000-11-171-4/+9
| | | | | | | | | | | | | Purpose: Code maintenance and development Description: I added two functions h5open_f and h5close_f to initialize C library and Fortran interface (flags, predefined datatypes, etc). Those calls are required for any F90 program that uses HDF5. I renamed H5f90misc.c and H5f90miscf.f90 files to H5f.c and H5ff.f90. New functions are added to those new files. Platforms tested: Solaris 2.6
* [svn-r2958] Elena Pourmal2000-11-161-2/+19
| | | | | | | | | | | | | | | | | | | Purpose: Code development and maintenance Description: Four new fortran functions to support array datatype were added: h5tarray_create_f h5tget_array_ndims_f h5tget_array_dims_f h5tget_super_f Two functions were deleted (commented out for now, can be returned easily if necessary): h5tinsert_array_f h5tget_member_dims Platforms tested: Library build was tested on Solaris2.6. I have to modify test program to use new functions. Right now test program will not compile.
* [svn-r2795] Elena Pourmal2000-11-031-1/+7
| | | | | | | | | | | | | | | | | | | Purpose: New feature Description: Now all Fortran flags such as H5F_ACC_RDONLY_F (previously defined in the H5fortran_flags.f90 file) are generated at runtime when h5init_fortran_f subroutine is called. All flags have now the same value as corresponding C flags. This change affects user's programming model: Every Fortran program that uses F90 HDF5 Library has to call h5init_fortran_f(error) subroutine before the first call to the F90 HDF5 Library and h5close_fortran_f(error) after the last call to the Library. h5init(close)_types_f calls are not needed anymore since F90 datatypes are intialized(closed) with the h5init(close)_fortran_f calls. Platforms tested: O2K and Solaris2.7
* [svn-r2739] Elena Pourmal2000-10-261-12/+12
| | | | | | | | | | | | | Purpose: Maintenancece. Description: F90 APIs would not compile anymore for || version.. Solution: Replaced old functions h5pset(get)_mpio, h5set(get)_xfer with ones h5pset(get)_fapl_m and h5pset(get)_dxpl_mpio_f Platforms tested: O2K.
* [svn-r2648] Elena Pourmal2000-10-101-6/+25
| | | | | | | | | | | | | | | | | | | | | | Purpose: Reimplemented references to the objects and dataset regions. Description: Previous implementation was not portable. This implementation should work on UNIX workstations and Crays, but is very inefficient since it uses memcpy to repack Fortran buffers with references to C buffers and vice versa. Solution: I used fortran derived datatype with integer fields. h5dwrite_f and h5dread_f have extra parameter when references are written or read. This parameter describes size of the buffer that holds references. Platforms tested: J90 and Solaris 2.6 H5Pf.c Some of the functions do not exist now in the development branch. Commented those out, so one does not need to apply patch in order to build Fortran Library.
* [svn-r2576] Purpose:Bill Wendling2000-09-191-0/+872
Adding the Fortran interface to the HDF5 library Description: Fortran is now a subdirectory of the HDF5 library tree. Platforms tested: Solaris and IRIX (O2K)
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