| Commit message (Collapse) | Author | Age | Files | Lines |
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svn merge -r26029:26536 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran
Tested: h5committest
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Removed the configure option that allows selective disabling of individual
internal filters (fletcher32, shuffle, etc.).
This feature mucked up the code with a lot of #ifdefs, saved very little
space and was not scalable to a general scheme for library size reduction.
We've decided to remove the feature while we investigate a more general
scheme for decreasing the library size.
Fixes: HDFFV-9086
Tested on: h5committest
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Update windows wix cpack process.
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r26188 r26280
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remove files with .clog2 extension generated by MPE when doing make clean
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configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch:
- Remove Infering parallel compilers (C and Fortran) from configure.ac
- Remove restriction to build shared with parallel
- Cleanup parallel sections in configure.ac
- remove large file support checks
- MPE fixes.
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Tested: windows
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svn merge -r25629:26029 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran
Tested: jam (--enable-fortran2003)
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Tested with h5committest and failed external daily tests.
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File is not generated by non-2003 compliant fortran compilers.
Tested: jam, koala and platypus
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svn merge -r25432:25629 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran
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Merge changes that correspond to the 64-bit ID changes (without the actual
switch to 64-bit IDs) to the 1.8 release branch. (Plus a few minor cleanups
and alignments with the trunk that aren't on the branch)
Tested on:
Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN
(h5committested on branch already for a week)
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For the top level, brings in changes for configure.ac, configure and the MANIFEST:
svn merge -c25286 https://svn.hdfgroup.uiuc.edu/hdf5/trunk .
svn merge -c25287 https://svn.hdfgroup.uiuc.edu/hdf5/trunk .
svn merge -c25290 https://svn.hdfgroup.uiuc.edu/hdf5/trunk .
For the fortran level:
384 17:00 svn merge -r25235:25272 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran
389 17:01 svn merge -r25284:25432 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran
For the fortran merges, I skipped changes relating to hyperslab selection since the C source has not been merged from the trunk yet. These changes should be in place in the fortran source when the C source is merged to the 1.8 branch.
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- remove configure checks for MPI_File_get_size and Big MPI_File_set_size as they are supported by MPIO implementations today.
- fix bug in t_mpi.c (HDFFV-8856)
tested with h5committest.
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svn merge -r25009:25235 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran
Tested: jam (gnu, intel, pgi)
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back fix for removing rpaths from lib files. The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath configure option was invoked.
Added instead configure variable hardcode_into_lib=no. This removes rpath from lib files on Linux and solaris machines.
Tested with h5committest on jam, koala, ostrich and platypus (cmake), and on emu and kite.
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number to 1.8.14-snap0
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svn merge -r24929:25009 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran
tested: jam (gnu)
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Merge of r24937 from the trunk
Adds H5free_memory to the API. This function should be used to free
memory allocated by the library (e.g., returned values from
H5Tget_tag, H5Pget_class_name, etc.).
This is mainly to help Windows applications deal with multiple CRT
instances, but can also be helpful when a debug memory manager is
being used or when the HDF5 API is being wrapped for managed languages
like Python and Java.
Tested on:
32-bit LE linux (jam) with fortran and C++
64-bit BE linux (ostrich)
64-bit LE linux (koala)
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Tested: h5committest
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svn merge -r24650:24929 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran .
tested: jam (intel, pgi, gnu)
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Tested: local linux
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Bring r24864 from trunk to 1.8 branch:
Remove all traces of MPI-POSIX VFD and GPFS detection/code.
Remove remaining traces of stream VFD.
Remove testpar/t_posix_compliant test (it's not actually verifying anything).
Clean up H5D__mpio_opt_possible() further.
Moved environment variable that disables MPI collective operations into
MPI-IO VFD (instead of it being in src/H5S.c).
A few other small code cleanups.
Tested on:
Mac OSX/64 10.9.2 (amazon) w/parallel & serial
(daily tested on trunk)
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LT_ADD_LIBHDF5_DEPENDENCY is used in Makefiles but the declaration in configure.ac is missing.
Copied declaration from trunk. Tested with h5committest on jam ostrich koala and platypus(cmake).
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Bring r24726 & r24727 from trunk to 1.8 branch:
Description:
Revert some earlier usage of strncpy, which was incorrect.
Bring Coverity changes from branch back to trunk:
r20821:
Use HDstrncpy. --gh
(Fixed already, with strdup)
r20822:
(Not merged, incorrect use of HDstrncpy())
r20823:
(Not merged, incorrect use of HDstrncpy())
r20824:
Maintenance: Bug fix: addressed CID 666.
Value stored at *expression_len should be used in the call to
HD5packFstring to avoid overflow (and unnecessary arithmetic
calculation and casting)
r20825:
Issue 642: Added check for error and handler with print to stderr and exit.
r20826:
Undo revision 20818, as that issue has already been fixed in the 1.8 branch
and trunk (but not coverity branch)
r20827:
(Not merged, incorrect use of HDstrncpy())
r20828:
Use HDstrncpy. --gh
(Corrected use of strncpy())
r20829:
Check return of H5Lget_val(print_udata->fid, path, targbuf,
linfo->u.val_size + 1, H5P_DEFAULT) and if error set trgbuf[0] to 0.
Check if H5Lunpack_elink_val(targbuf, linfo->u.val_size, NULL,
&filename, &objname) was successful and allow print. Otherwise filename
and objname are not created. (init those to NULL)
r20830:
resolved coverity issues 939, 940, 941, 944, and 947.
all were complaints about use of sprintf, and in all cases, the
buffers used were large enough for all eventualities.
Resolved issue by replacing calls to sprintf with calls
to snprintf.
r20831:
Maintenance: Addressed CID 852
Replaced sprintf with snprintf
r20832:
Purpose: Fix valgrind issues with hl/examples/ex_image2
Description:
Modified hl/examples/ex_image2 to free global "gbuf" before exit.
Tested on:
Mac OSX/64 10.9.1 (amaon) w/C++, FORTRAN & Threadsafety
(too minor to require h5committest)
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branch,
svn merge -r23351:24650 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran .
Tested: jam (gcc, intel), koala (gcc)
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RELEASE.txt for new info.
The 1.8 branch is open now for code changes.
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Switched default to link to shared lib files when HDF5 is configure with --disable-static.
This addressed HDFFV-8141, h5cc failed because it defaulted to link to lib*.a files which
aren't built with --disable-static.
-help message also updated.
Tested in trunk.
Merged code tested with h5committest.
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Merged INSTALL and h5fc.in from trunk.
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Bring r24101 & 24111 from trunk to 1.8 branch:
r24101:
=======
Description:
Clean up warnings, enable new compiler warning flag(s) and bring back
changes from Coverity branch:
r20813:
Remove the dead code as listed for coverity bug #1722. h5committested.
r20814:
Issue 69: Check return value and throw error if negative return. Also free datatype id on error
r20815:
Use HDstrncpy. --gh
r20816:
Replaced one last HDstrcat call with HDstrncat to resolve coverity issue 832.
r20817:
Use HDstrncpy and HDstrncat. --gh
r20818:
Purpose: Fix valgrind issues with h5jam
Description:
Modified h5jam to free strings strdup'd in parse_command_line before exit. Note
that they may still not be freed in case of error, due to the widespread use of
exit().
r20819:
Issue 80: change loop to use int as loop index.
r20820:
Maintenance: Fixed the bug found by coverity CID 788
There were two problems with this function:
1) it tried to unnecessary free NULL pointer
2) it tried to allocate c_name buffer that is done by H5Pget_class_name
r24111:
=======
Description:
Restrict GCC diagnostic pragmas to only gcc 4.6+
Tested on:
Mac OSX 10.8.4 (amazon) w/gcc 4.8.1, C++ & FORTRAN
(too minor to require h5committest)
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Bring r24020 from trunk to 1.8 branch:
Clean up compiler warnings
Tested on:
Mac OSX/64 10.8.4 (amazon) w/C++ & FORTRAN
(too minor to require h5committest)
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Tested: local linux
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Need to update libtool version number for v1.8.11 since two functions,
H5Pget_dxpl_multi and H5Pset_dxpl_multi were removed. Then v1.8 is now
v1.8.12-xxx and needed an update to.
config/lt_vers.am:
libtool information is changed to 8.0.1 because it is a revision
different from v1.8.10.
configure:
src/Makefile.in:
hl/src/Makefile.in:
hl/c++/src/Makefile.in:
hl/fortran/src/Makefile.in:
c++/src/Makefile.in:
fortran/src/Makefile.in:
README.txt:
autogenerated by bin/reconfiure.
Tested: h5committest, then visual inspect that the libhdf5.so.x.y.z is
changed accordingly.
Built in duck by hand and see it changes to libhdf5.8.dylib too.
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Reset RELEASE.txt for next release (1.8.12).
Tested: h5committest.
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from trunk that will not go into the 1.8.11 release.
Tested with h5committest.
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svn merge -r23351:23487 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran .
Tested: windows.
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Tested: jam (gnu, intel)
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Tested: jam (intel)
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