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* [svn-r10016] James Laird2005-02-161-1/+0
| | | | | | | | | | | | | | | | | | | Purpose: Bug fix Description: modi4 dies during build with strange errors. The root cause of these is a two-year-old hack in HDF5's libtool script that only takes effect on IRIX. Solution: Edited the libtool hack (by editing ltmain.sh) to correct a bug in the hack. Also made sure that compiler-specific DEFAULT_LIBS are used when linking. Platforms tested: sleipnir, copper, modi4, sol
* [svn-r9993] Purpose:James Laird2005-02-112-2/+2
| | | | | | | | | | | | | | | | | | | | Bug fix Description: Arabica exhibited strange errors when linker found wrong versions of header files. This happened because include directories were given to linker in the wrong order. Solution: Move include directories from AM_CFLAGS variable to INCLUDES variable to put them before CPPFLAGS variable. Trust me, it works. This bug may also have contributed to strange errors on other platforms (kelgia?). Platforms tested: copper, sleipnir, arabica. (h5dump broke while building on arabica, but this happened in a clean checkout, too).
* [svn-r9988] Purpose:James Laird2005-02-111-15/+4
| | | | | | | | | | | | | | | | | | | | Bug fix Description: pmake (on modi4, for instance) complains about undefined variables if it is run without the -V flag, which turns those errors to warnings. Solution: Added test to configure.in to see if $MAKE will allow Makefiles with undefined variables. If not, sets -V flag in AM_MAKEFLAGS. Ensured that all custom make targets use AM_MAKEFLAGS. Also defined all variables that caused errors in top-level Makefile.am. This means that pmake can be used to build hdf5 *from the top level only*. To run make from a subdirectory, still need to use -V flag (or use make or gmake). Platforms tested: modi4, heping, copper, sleipnir
* [svn-r9930] James Laird2005-02-031-1/+1
| | | | | | | | | | | | | | | | | | Purpose: Bug fix Description: Parallel builds were breaking in tools/lib Solution: talign didn't realize it depended on libh5tools.la because its dependencies listed the full path (../../tools/lib/libh5tools.la). Changed this, and made similar changes in a couple of other directories. This checkin should also add the --foreign flag to every Makefile.in Platforms tested: sleipnir (minor change)
* [svn-r9928] Purpose:Quincey Koziol2005-02-031-1/+1
| | | | | | | | | | | | | New feature Description: Add basic code for new B-tree implementation. They don't do much yet, aren't hooked up to anything yet and the format may change, but I'd like to start getting them into the daily tests. Platforms tested: FreeBSD 4.11 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r9920] Purpose:James Laird2005-02-021-2/+3
| | | | | | | | | | | | | | | | | | | Bug fix Description: Found the permanant fix to automake/CVS dependency problem Solution: Added AM_MAINTAINER_MODE macro to configure.in. Now automake will never try to regenerate Makefiles, Makefiles.in, configure, H5config.h, etc. when they are out of date, nor will it print any warnings. Developers should be very very careful to use reconfigure script, and can add --enable-maintainer-mode flag to configure on heping to regenerate these files correctly. Platforms tested: heping sleipnir copper
* [svn-r9915] Purpose:James Laird2005-02-021-6/+6
| | | | | | | | | | | | | | | Bug fix Description: Configuration files' timestamps were incorrect. Solution: Update Makefiles.in. Also added correct paths to autotools on heping, so heping build should be able to re-generate configuration files even if they are still broken. Platforms tested: sleipnir
* [svn-r9912] Purpose:James Laird2005-02-011-87/+8
| | | | | | | | | | | | | | | | | Bug fix Description: Dependencies between configure files (aclocal, configure.in, configure, Makefiles.am and .in) are still causing Makefiles to try to run autotools during build. Solution: Committed all Makefiles.in to update their timestamps. As a temporary measure, forcibly prevented automake from running autotools during build by redefining the variables it uses. Platforms tested: sleipnir (No changes to Makefile content)
* [svn-r9907] Purpose:James Laird2005-02-011-0/+1
| | | | | | | | | | | | | Bug fix Description: Different compilers use different flags to include Fortran module files Solution: Changed boilerplate to use configure variable rather than hardcoded -M flag. Platforms tested: sleipnir, sol, copper
* [svn-r9902] Purpose:James Laird2005-02-014-678/+955
| | | | | | | | | | | | | | | Configuration feature Description: HDF5 now uses automake to generate Makefiles Solution: Makefile.in files are now generated from Makefile.am files. To reconfigure (after chaning a Makefile.am or configure.in): /bin/sh bin/reconfigure.sh Platforms tested: Many
* [svn-r9838] Purpose:Quincey Koziol2005-01-193-14/+25
| | | | | | | | | | | | | | | | | | Bug fix Description: Correctly retire the H5E_LEN setting, now that the FORTRAN and C++ APIs have been corrected to not use it either. Solution: Pass in the string buffer length for FORTRAN In the C++ API, call H5Eget_msg() in a manner similar to the way H5Fget_name() is called. Platforms tested: Linux 2.4 (heping) w/FORTRAN & C++ Solaris 2.7 (arabica) w/FORTRAN & C++
* [svn-r9833] Purpose: Bug fixElena Pourmal2005-01-181-32/+37
| | | | | | | | | | Description: h5fc couldn't create object files Solution: Brought fixes from 1.6 to 1.7 Platforms tested: arabica Misc. update:
* [svn-r9801] Purpose:Quincey Koziol2005-01-109-120/+125
| | | | | | | | | | | | Bug fix Description: Belatedly chase change of hobj_ref_t in C APIs. Platforms tested: FreeBSD 4.10 (sleipnir) w/backward compatibility turned on IRIX64 6.5 (modi4) w/FORTRAN h5committest
* [svn-r9727] Purpose:Quincey Koziol2004-12-2914-729/+471
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-) Description: Generally speaking, this is the "signed->unsigned" change to selections. However, in the process of merging code back, things got stickier and stickier until I ended up doing a big "sync the two branches up" operation. So... I brought back all the "infrastructure" fixes from the development branch to the release branch (which I think were actually making some improvement in performance) as well as fixed several bugs which had been fixed in one branch, but not the other. I've also tagged the repository before making this checkin with the label "before_signed_unsigned_changes". Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel & fphdf5 FreeBSD 4.10 (sleipnir) w/threadsafe FreeBSD 4.10 (sleipnir) w/backward compatibility Solaris 2.7 (arabica) w/"purify options" Solaris 2.8 (sol) w/FORTRAN & C++ AIX 5.x (copper) w/parallel & FORTRAN IRIX64 6.5 (modi4) w/FORTRAN Linux 2.4 (heping) w/FORTRAN & C++ Misc. update:
* [svn-r9684] Purpose:Quincey Koziol2004-12-171-0/+31
| | | | | | | | | | | | | | Port Description: Initial work for supporting GNU FORTRAN/F95 on FreeBSD. I think I've got things mostly set up correctly, but I'm getting an internal compiler error on one of the FORTRAN sources, so I'm not going to add this configuration to the daily tests yet. Platforms tested: FreeBSD 4.10 (sleipnir) w/GNU FORTRAN Not tested in h5committest
* [svn-r9659] Purpose:Pedro Vicente Nunes2004-12-131-1/+7
| | | | | | | | | | | | | added support for the hl library in the fortran h5fc script Description: Solution: Platforms tested: linux Misc. update:
* [svn-r9405] Purpose:Quincey Koziol2004-10-121-22/+15
| | | | | | | | | | | | | Bug fix Description: Correct/update detection of Linux platforms. Also, refactor common code out of different architectures for Linux builds. Platforms tested: Linux 2.4 (verbena) Too minor to require h5commitest
* [svn-r9250] Purpose:Quincey Koziol2004-09-142-5/+5
| | | | | | | | | | | | | | | | | | | | Bug fix Description: Correct typedef for dataset region references to avoid struct alignment issues on Crays. Solution: Change the typedef for hdset_reg_ref_t from a struct to an array of unsigned char's of the correct size and propagate the appropriate adjustments around the code. Platforms tested: FreeBSD 4.10 (sleipnir) Linux 2.4 (verbena) w/fortran Cray T90 (subzero) w/fortran Cray SV1 (wind) w/fortran & parallel Cray T3E (cyclone) w/fortran & parallel
* [svn-r9183] Purpose: New featureRaymond Lu2004-09-011-5/+5
| | | | | | | | | | | | Description: Restore 6 old error API functions back to the library to be backward compatible with v1.6. They are H5Epush, H5Eprint, H5Ewalk, H5Eclear, H5Eset_auto, H5Eget_auto. These functions do not have error stack as parameter. Solution: Internally, these functions use default error stack. Platforms tested: h5committest and fuss. Misc. update: RELEASE.txt
* [svn-r9154] Elena Pourmal2004-08-255-3/+83
| | | | | | | | | | | | Purpose: Maintenance/bug fixes (OSF1 C++ and missing Fortran APIs) Description: bringing 1.6 changes to 1.7 Solution: Platforms tested: OSF1, Solaris 2.8, AIX5.1 Misc. update:
* [svn-r9124] Purpose: MaintenanceElena Pourmal2004-08-201-0/+14
| | | | | | | | | | | Description: Added PGI Fortran support for Linux64 systems (x86_64) Solution: Platforms tested: AMD Opteron box at AMD Sunnyvale and verbena with PGI and gcc compilers. Misc. update:
* [svn-r8983] Purpose:Quincey Koziol2004-08-021-55/+71
| | | | | | | | | | | | Update dependencies Description: Update dependencies after config/depend1.in bugfix Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel IRIX64 6.5 (modi4) h5committested
* [svn-r8956] Elena Pourmal2004-07-271-0/+3
| | | | | | | | | | | | | Purpose: Maintenance for MAC OSX Description: Added support for Absoft Fortran compiler f95; Ddefault compiler is set to IBM xlf. Solution: Platforms tested: pommier with xlf and Absoft f95 compilers Misc. update:
* [svn-r8836] Elena Pourmal2004-07-083-0/+179
| | | | | | | | | | | | | | | | | Purpose: Maintenance Description: Added h5fget_name_f and h5fget_filesize_f subroutines and tests. Solution: N/A Platforms tested: arabica (32-bit), sol (64-bit) parallle build on copper failed for the C library with the the following error: ld: 0711-317 ERROR: Undefined symbol: .H5FD_stdio_term Since this change doesn't affect the C library, I am cheking it in and will retest the fresh CVS copy after this check-in. Misc. update:
* [svn-r8817] Purpose:Xuan Bai2004-07-071-1/+1
| | | | | | | | | | | | | | | | | | Bug Fix. Description: nh5zget_filter_info_c function was not declcared as H5_FCDLL, which is required for fortran dll in Windows. _H5ZGET_FILTER_INFO_C is considered as an unresolved external symbol by Fortran Compiler in Windows without H5_FCDLL. Solution: Added H5_FCDLL for nh5zget_filter_info_c function. Platforms tested: DEC Fortran 6.0 in Windows XP. Misc. update:
* [svn-r8799] Elena Pourmal2004-07-032-14/+6
| | | | | | | | | | | | | | Purpose: Maintenance Description: H5_SZIP_CHIP_OPTION_MASK was deleted from the list of the available parameters for the H5Pset_szip function. Solution: Updated Fortran source, tests and documentation to reflect this change. Platforms tested: arabica (too small for h5committest) Misc. update:
* [svn-r8781] James Laird2004-07-016-5/+102
| | | | | | | | | | | | | | | | Purpose: HDF5 now supports SZIP with no encoder. Description: SZIP can be configured to have both encoder and decoder or just to have the decoder. HDF5 can now query the configuration of any filter, and will throw errors if users try to write using a filter with encoding disabled. Solution: Added H5Zget_filter_info function, changed API for H5Pget_filter and H5P_get_filter_by_id. See SZIP RFC. Platforms tested: Copper (fortran, C++, parallel), Sleipnir (C++), Arabica (fortran, C++), Verbena (fortran, C++) Misc. update:
* [svn-r8545] Purpose: bug fixRaymond Lu2004-05-201-1/+1
| | | | | | | Description: array definition is short of 1. Platforms tested: No test. simple fix
* [svn-r8538] Purpose: Add null dataspace for fortran.Raymond Lu2004-05-184-41/+48
| | | | Platforms tested: verbena pgf90(only fortran is concerned)
* [svn-r8468] Purpose:MuQun Yang2004-05-031-290/+290
| | | | | | | | | | | | | | | | | Fixing Fortran DLL on windows Description: Need to use another macro H5_FCDLL to build fortran C stub library. change all H5_DLL to H5_FCDLL in file H5fproto.h. Solution: see above. Platforms tested: eirene(fortran), arabica(fortan) Misc. update:
* [svn-r8404] Elena Pourmal2004-04-225-7611/+299
| | | | | | | | | | | | | | | | | Purpose: Maintenance Description: h5dwrite/read_f and h5awrite_read_f functions were overloaded with dims argument being of type INTEGER and INTEGER(HSIZE_T). We promised to remove overloading in 1.4 release. It was removed from documentation but not from the source code. Solution: Finish code cleanup. Platforms tested: Solaris 2.7 32 and 64 bit, and copper with --enable- parallel. Windows are broken, so Kent and Xuan will test it with their changes later. Misc. update:
* [svn-r8383] Purpose:Quincey Koziol2004-04-184-13/+8
| | | | | | | | | | | | | Code cleanup Description: Clean up lots of warnings based on those reported from the SGI compilers as well as gcc. Platforms tested: SGI O3900, IRIX64 6.5 (Cheryl's SGI machine) FreeBSD 4.9 (sleipnir) w/ & w/o parallel h5committest
* [svn-r8150] Purpose:Pedro Vicente Nunes2004-02-041-0/+2
| | | | | | | | | | | | | introduced the constant H5Z_FILTER_ALL, used to remove all filters in H5Premove_filter Description: Solution: Platforms tested: linux Misc. update:
* [svn-r8149] Pedro Vicente Nunes2004-02-043-17/+17
| | | | | | | | | | | | | | Purpose: replaced name of delete filter with remove filter for the new function H5Premove_filter Description: Solution: Platforms tested: linux Misc. update:
* [svn-r8117] Purpose:Quincey Koziol2004-01-273-0/+91
| | | | | | | | | | | | | Code cleanup Description: Add C++ and FORTRAN wrappers for new H5Pdelete_filter routine, along with documentation and a note in the release notes. Platforms tested: FreeBSD 4.9 (sleipnir) Linux 2.4 (verbena) w/ C++ and FORTRAN Too minor for full h5committest
* [svn-r8043] Purpose:Albert Cheng2004-01-081-0/+16
| | | | | | | | | | | | | Feature Description: Added option -showconfig which Shows the HDF5 library configuration summary Platforms tested: No h5committest test which does not test these tools. Tested in eirene by hand. Misc. update:
* [svn-r8038] Purpose:Quincey Koziol2004-01-081-2/+2
| | | | | | | | | | | | | | | | | | | | Bug fix Description: When two property lists are compared, the H5Pequal routine was just comparing the raw information for the property values. This causes problems when the raw information contains pointers to other information. Solution: Allow a 'compare' callback to be registered for properties, so that a user application get perform the comparison itself, allowing for "deep" compares of the property value. This was exported to the H5Pregister & H5Pinsert routines in the development branch, but not the release branch. Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
* [svn-r8033] Elena Pourmal2004-01-061-0/+15
| | | | | | | | | | | | | | Purpose: Maintenance Description: Fortran APIs MAC OS X port for IBM XL Fortran compiler Solution: Brought back changes from 1.6 branch Platforms tested: pommier, h5comittested; this time h5committest complained about copperpp directory and didn't run; tests on verbena and sol passed. Misc. update:
* [svn-r7934] Purpose:Quincey Koziol2003-12-113-3/+243
| | | | | | | | | | | Add new feature Description: Add FORTRAN wrappers for new H5I routines. Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
* [svn-r7643] Purpose:Quincey Koziol2003-10-153-880/+666
| | | | | | | | | | Code cleanup Description: Clean up warnings, remove unused routines, tidy things up a lot. Platforms tested: h5committest
* [svn-r7642] Purpose:Quincey Koziol2003-10-151-46/+27
| | | | | | | | | | Code cleanup Description: Remove unused 'HD5c2fstr' routine and clean up coding for other routines. Platforms tested: h5committest
* [svn-r7641] Purpose:Quincey Koziol2003-10-151-169/+3
| | | | | | | | | | | | Code cleanup Description: Start stripping leftovers from HDF4 out of this file, working toward getting everything defined at configure time, instead of depending on the framework of ifdef's used in HDF4. Platforms tested: h5committest
* [svn-r7639] Purpose:Quincey Koziol2003-10-152-20/+10
| | | | | | | | | | Code cleanup Description: Remove UNICOS-specific ifdefs and replace with portable code. Platforms tested: h5committest
* [svn-r7638] Purpose:Quincey Koziol2003-10-151-2/+2
| | | | | | | | | | Code cleanup Description: Clean up compiler warnings Platforms tested: h5committest
* [svn-r7626] Purpose:Quincey Koziol2003-10-141-44/+70
| | | | | | | | Update dependencies and tracing information Platforms tested: Linux 2.4 (verbena) w/FORTRAN too minor for h5committest
* [svn-r7621] Elena Pourmal2003-10-133-12/+12
| | | | | | | | | | | | | Purpose: Rolling over changes from 1.6 branch Description: h5pget(set)_cache_f functions had a wrong type of the third parameter Solution: Fixed the type to be INTEGER(SIZE_T) Platforms tested: kelgia, arabica 64-bit, copper 64-bit Misc. update:
* [svn-r7612] Purpose:Quincey Koziol2003-10-131-1/+20
| | | | | | | | | | | | Code cleanup Description: Added missing prototypes. Platforms tested: FreeBSD 4.9 (sleipnir) Linux 2.4 (verbena) w/FORTRAN too minor for h5committest
* [svn-r7611] Purpose:Quincey Koziol2003-10-137-85/+86
| | | | | | | | | | | | Code cleanup Description: Cleaned up various compiler warnings Platforms tested: FreeBSD 4.9 (sleipnir) Linux 2.4 (verbena) w/FORTRAN too minor for h5committest
* [svn-r7610] Purpose:Quincey Koziol2003-10-135-347/+37
| | | | | | | | | | | | | Code cleanup Description: Removed "H5Git" routines, now that there are library routines which perform the same functionality. Platforms tested: FreeBSD 4.9 (sleipnir) Linux 2.4 (verbena) w/FORTRAN too minor for h5committest
* [svn-r7601] Elena Pourmal2003-10-103-5/+10
| | | | | | | | | | | | | | Purpose: Bug fix Description: Parameter rdcc_nelmts of the h5pget_cache_f subroutine had wrong INTEGER(SIZE_T) instead of INTEGER type. Solution: Fixed the type Platforms tested: arabica in 64-bit mode (where INTEGER(SIZE_T) is not the same as INTEGER) Misc. update:
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