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* [svn-r21362] Change the integer type for filno in in H5O_info_t derived ↵Scot Breitenfeld2011-09-051-8/+8
| | | | | | | | | | | | | | | | | type to c_long to match the unsigned long, via standard: F2003, Note 15.9 "The C international standard specifies that the representations for nonnegative signed integers ar ethe same as the corresponding values for signed integers. Because Fortran does not provide direct support for unsigned kinds of integers, the ISO_C_BINDING module does not make accessible named constants for their kind type parameter values. Instead, a user can use the signed kinds of integers to interoperate with the unsigned types and all their qualified versions as well...." Tested: (jam, intel)
* [svn-r21360] Snapshot version 1.9 release 90HDF Tester2011-09-041-1/+1
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* [svn-r21329] Snapshot version 1.9 release 89HDF Tester2011-08-281-1/+1
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* [svn-r21295] Description:Scot Breitenfeld2011-08-235-1444/+110
| | | | | | | Removed duplicate h5p, h5a, and h5d, double precision functions in _F90 and _F03 files that are already defined in H5_DBLE_InterfaceInclude Tested: jam (gcc 4.5, intel 12.0)
* [svn-r21294] Desciption:Scot Breitenfeld2011-08-232-259/+258
| | | | | | | Added to the *.def the module's appended name "provisional" for those functions that were split between the _F90 and _F03 files. Windows
* [svn-r21275] Description: Changed the --enable-fortran2003 behavior to:Scot Breitenfeld2011-08-211-1/+0
| | | | | | | | | | | 1) --enable-fortran2003 will enable only F2003 features. It is not a replacement for --enable-fortran. If compiler is not F2003 compliant configure should fail. 2) if --enable-fortran2003 is specified with out --enable-fortran configure fails 3) Configure help indicates that --enable-fortran2003 is in addition to --enable-fortran Updated the version checks of different compilers. Tested: jam (gcc 4.1 4.6, intel 10.1 11.1 12.0, pgi)
* [svn-r21272] Added entry for H5Oclose_f in phdf5_fortrandll.defScot Breitenfeld2011-08-191-0/+1
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* [svn-r21271] Fixed Windows $DEC! declaration for H5close_f, added missing ↵Scot Breitenfeld2011-08-192-1/+2
| | | | | | entry in hdf5_fortrandll.dif
* [svn-r21263] Add F2003 support to CMake buildsAllen Byrne2011-08-191-0/+20
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* [svn-r21248] Mereged the F2003 branch into the trunk.Scot Breitenfeld2011-08-1860-23240/+35278
| | | | | | | | | Items merged: fortran directory, src/libhdf5.settings.in configure.in configure MANIFEST Tested: (all platforms used by daily tests, both with --enable-fortran and --enable-fortran2003)
* [svn-r21225] Snapshot version 1.9 release 88HDF Tester2011-08-141-1/+1
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* [svn-r21194] Add parallel version of windows def file for fortran exportsAllen Byrne2011-08-082-2/+536
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* [svn-r21193] Correct mis-spelled functionsAllen Byrne2011-08-081-2/+2
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* [svn-r21185] Snapshot version 1.9 release 87HDF Tester2011-08-071-1/+1
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* [svn-r21171] Commit HDFFV-5929 winthreads define fixAllen Byrne2011-08-041-17/+8
| | | | | | Change reference of generated executables in src and fortran/src to use $<TARGETFILE:xxx> format. Tested: local linux
* [svn-r21158] Snapshot version 1.9 release 86HDF Tester2011-07-311-1/+1
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* [svn-r21149] Snapshot version 1.9 release 85HDF Tester2011-07-241-1/+1
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* [svn-r21121] Description:Quincey Koziol2011-07-181-2/+2
| | | | | | | | | Switch from H5P_DATASET_ACCESS_DEFAULT to H5P_DEFAULT for calls to H5Rdereference2(). Tested on: Mac OS X/32 10.6.8 (amazon) w/debug (too minor to require h5committest)
* [svn-r21117] Issue 2763 - I added a new parameter of object access property ↵Raymond Lu2011-07-181-2/+2
| | | | | | list to the function H5Rdereference. It's called H5Rdereference2 now. H5Rdereference function has been deprecated to H5Rdereference1. I also added some test cases in trefer.c. Tested on jam, heiwa, and koala.
* [svn-r21033] Snapshot version 1.9 release 84HDF Tester2011-06-261-1/+1
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* [svn-r21028] Description: Scot Breitenfeld2011-06-241-1/+1
| | | | | | | | Changed the length of the fortran string passed to HD5packFstring in the function nh5pget_external_c. The 3rd argument should be the fortran length of the string, not the C length of the string (which includes the null). Tested: jam (intel and gnu), also checked the example h5ex_d_extern.f90 which detected the problem on Amazon c2 machine (reported by Larry).
* [svn-r21000] Snapshot version 1.9 release 83HDF Tester2011-06-191-1/+1
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* [svn-r20922] Snapshot version 1.9 release 82HDF Tester2011-05-291-1/+1
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* [svn-r20890] Snapshot version 1.9 release 82HDF Tester2011-05-231-1/+1
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* [svn-r20504] Purpose:Mike McGreevy2011-04-142-2/+11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | General shared library improvements for CYGWIN / AIX Description: Shared libraries are disabled on both CYGWIN and AIX due to inability to build them correctly. Part of the problem in both of these situations is the lack of the libtool flag -no-undefined, which tells libtool that all needed symbols are defined at link time (a requirement on these systems) and that it's okay to build shared libraries. Another problem are lack of dependencies between wrapper libraries and core C HDF5 library. This patch addresses both of these by fixing configure to add in -no-undefined flag for libtool during linking and adds automake dependencies in the Makefile.am files. After testing, both CYGWIN and AIX now generate shared libraries, but there are still some test failures in each. (cache_api, dt_arith, and testerror.sh on CYGWIN, and fortran tests on AIX). Even though the shared libraries are not quite perfect, this is a general improvement to what we had before, so I'm applying the patch anyways. Note that default behavior of shared libraries on these systems being disabled has NOT been changed and requires the use of the --enable-unsupported to attempt to build them. We will need to address the test failures in each architecture prior to formally supporting shared libraries on each. Tested: h5committested & CYGWIN tested (on bangan) (AIX tested by Albert on bp-login2)
* [svn-r20502] Purpose:Mike McGreevy2011-04-141-24/+58
| | | | | | | | | | | | | | | | | | | | | | | | Add "silent make" mode configure option. Description: Automake 1.11 has a new option available that allows for a silent make mode. This functionality needs to be explicitly enabled in configure.in via the use of the automake macro AM_SILENT_RULES, which is what this commit is adding. This introduces a new configure option: --{en|dis}able-silent-rules This option is on by default, and simplies compile and link line outputs when building the library. Disabling this option will print full "verbose" output (i.e., full compile and linking lines for each target). Tested: This was tested on jam & h5committested
* [svn-r20475] Purpose:Mike McGreevy2011-04-111-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - Revise shared Fortran library disabling scenarios in configure - Improve configure output summary Description: Shared Fortran libraries are not supported on Mac, but were being disabled by configure in a way that also forced the C libraries to be static-only. This has been fixed, so now only shared Fortran is disabled while shared C can remain. This prompted two additional changes: 1. While working on the check that addresses whether or not shared Fortran libraries are allowed, removed old and no longer needed check(s) that disable shared Fortran libraries with HP, Intel 8, PGI, and Absoft compilers. (Essentially, Mac is the only situation in which Fortran shared are disabled by configure.) 2. Having two different states of libraries (i.e. shared C library with static-only Fortran library) was not apparent in the configure summary, which labeled all libraries as either shared and/or static. I've added lines to both the C++ and Fortran output sections to list shared/static-ness of these libraries specifically. Additionally, I've made sure that the new --enable-unsupported configure option correctly overrides configure if it tries to disable a shared library. Tested: jam, fred, & h5committest
* [svn-r20405] Description:Quincey Koziol2011-04-041-1/+1
| | | | Bump patch release number, after giving out private snapshots.
* [svn-r20141] Bring 1.8 r20139 cmake and windows changes to trunkAllen Byrne2011-02-221-0/+1
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* [svn-r20061] Description:Quincey Koziol2011-02-082-22/+24
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring changes from Coverity branch to trunk: r19930: Fix memory leaks involving VL attributes in h5repack and h5diff. The buffers in copy_attr and diff_attr were not checked for the presence of a vlen before being freed, and vlen storage was never reclaimed. Added checks and calls to H5D_vlen_reclaim(). r19933: Purpose: Fix memory leak in H5L_move_cb() Description: H5L_move_cb copied the source link using H5O_msg_copy() but freed it manually using H5MM_xfree(). Since H5O_link_copy allocates the link using H5FL_MALLOC, this causes the link to be allocated from the free list but is never put back on the free list when it is freed. This prevents the link free list from shutting down properly. Modified H5L_move_cb() and H5L_move_dest_cb() to free the link properly using H5O_msg_free(). r19973: Fix resource leaks by freeing string created by HD5f2string r19974: Issue #345: Inialize buf variable to null Tested on: Mac OS X/32 10.6.6 (amazon) w/debug & production (h5committested on Coverity branch)
* [svn-r19914] Correct format of empty parameterAllen Byrne2011-01-051-1/+1
| | | | bring r19913 from 1.8
* [svn-r19910] Change how LINK_FLAGS for fortran are appended on Windows - ↵Allen Byrne2011-01-051-1/+5
| | | | correct for just shared libs
* [svn-r19909] Change how LINK_FLAGS for fortran are appended on WindowsAllen Byrne2011-01-051-7/+1
| | | | bring r19908 from 1.8 branch
* [svn-r19907] Windows: Correct how fortran links in CRT library. Also correct ↵Allen Byrne2011-01-041-4/+4
| | | | | | macro use for checking libtype. bring r19906 from 1.8 branch
* [svn-r19839] Updated to libtool v 2.4, autoconf 2.68 and m4-1.4.15.Larry Knox2010-11-231-0/+3
| | | | Tested with h5committest on amani, heiwa, and jam.
* [svn-r19740] Snapshot version 1.9 release 79HDF Tester2010-11-071-1/+1
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* [svn-r19701] Snapshot version 1.9 release 78HDF Tester2010-10-311-1/+1
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* [svn-r19666] Snapshot version 1.9 release 77HDF Tester2010-10-241-1/+1
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* [svn-r19654] Description:Quincey Koziol2010-10-2110-240/+208
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring Coverity revisions from branch back to trunk, and clean up some other misc. compiler warnings also. r19500: Fix coverity items 1446 and 1447. Moved up calls to memset in test_cont in ohdr.c so the test never tries to close uninitialized locations. r19501: Fix coverity items 1398-1445. Various uninitialized variable errors in fheap.c. r19502: Fixed coverity issue 579 and some additional warnings in the file as well. r19503: Bug fix: This fix addressed the "RESOURCE_LEAK" problems #789 and 790, run 26 r19504: minor mods to try to keep coverity from flagging false positives. r19505: Fixed coverity issues 566 - 571. Declared variables that are passed to functions that use them as arrays to be arrays of size 1. Tested on: Mac OS X/32 10.6.4 (amazon) w/debug, production & parallel (h5committested on trunk)
* [svn-r19569] Snapshot version 1.9 release 76HDF Tester2010-10-101-1/+1
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* [svn-r19512] Snapshot version 1.9 release 75HDF Tester2010-10-051-1/+1
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* [svn-r19509] Improve CMake support for CYGWIN.Allen Byrne2010-10-041-24/+20
| | | | | | Correct script comment in testh5diff.sh Tested: Windows Cygwin
* [svn-r19506] Bring changes from revisions 19408, 19421, and 19442 from ↵Larry Knox2010-10-042-12/+72
| | | | | | branches/hdf5_1_8 to trunk. These revisions reorganize the compile scripts using h5cc.in, h5fc.in, and h5c++.in, add checks for installed examples to the scripts that run them after installation, and add DESTDIR for install as needed for RPMs. Tested on amani, heiwa and jam by h5committest and with CYGWIN.
* [svn-r19434] Correct use of lib, include, bin in INSTALL commands to use ↵Allen Byrne2010-09-201-5/+5
| | | | | | proper variables. Tested: local linux
* [svn-r19366] Updated autoconf to version 2.6.7, libtool to version 2.2.10, ↵Larry Knox2010-09-101-1/+1
| | | | | | and m4 to version 1.4.14. Also added m4 directory for m4 macros according to autoconf suggestion. Tested with h5committest on amani, jam, and heiwa, and on linew.
* [svn-r19086] Snapshot version 1.9 release 74HDF Tester2010-07-181-1/+1
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* [svn-r19064] Snapshot version 1.9 release 73HDF Tester2010-07-111-1/+1
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* [svn-r19059] Brought changes from hdf5_1_8 to add version information for ↵Larry Knox2010-07-091-0/+2
| | | | | | fortran and c++ compilers in libhdf5.settings file and configure output (r18836), to install examples as part of make install (r18680), and to provide scripts to compile and run the examples after they are installed (r18817). Tested with new/h5committest on amani, heiwa, and jam.
* [svn-r19047] Snapshot version 1.9 release 72HDF Tester2010-07-041-1/+1
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* [svn-r19031] Snapshot version 1.9 release 71HDF Tester2010-06-281-1/+1
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