| Commit message (Collapse) | Author | Age | Files | Lines |
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Autotools Update
Description:
I've updated autoconf, automake, and libtool to the latest/greatest
versions; 2.53, 1.6, and 1.4.2 resp.
Many changes come with the new versions:
- ltconfig is no longer used
- acconfig.h is no longer used (#define values are declared with
the macro)
- regeneration of all of the aclocal.m4, configure, and
H5config.h.in files.
- new config.{guess,sub} files
- new ltmain.sh file
Platforms tested:
AIX (blue), and Linux
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Purpose:
Bug Fix
Description:
Parallel Fortran wasn't working on Modi4. The tests for parallel
MPI Fortran were failing to find MPI files.
Solution:
Changed the AC_TRY_FLINK() macro so that libraries are included
at the end of the link line so that unresolved symbols can be
found...
Platforms tested:
Modi4
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Purpose:
Bug Fix
Description:
Hrm...When I was restoring the LDFLAGS variable after a failure, I
fergot to put a $ on the saved_LDFLAGS variable during the
assignment.
DOH!
Solution:
Added the $.
Platforms tested:
Modi4
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New Feature
Description:
Added support for the IBM PowerPC AIX architecture. Really just a
copy of the RS6000 AIX config file...
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Bug Fix
Description:
I wasn't testing if the Fortran compiler could actually do the MPI
compilation tests.
Solution:
Changed the configure script so that it uses Fortran 90 to test the
MPI compilation stuff instead of the MPI C compiler...
Platforms tested:
AIX and Linux
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Purpose:
Bug Fix
Description:
The new way of detecting LibZ (just specifying the directory where
include/ and lib/ are) wasn't propagated down to the Fortran
directory.
Solution:
Added that code...
Platforms tested:
AIX and Linux
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Purpose:
Bug fix
Description:
I borrowed function HDpackFstring from the HDF4 Library and
left name unchanged. It causes linking problems for Fortran users
that use both HDF4 and HDF5 Libraries in their applications.
Solution:
Changed the name to be HD5packFstring
Platforms tested:
Solaris 2.7
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Bug Fix
Description:
The Fortran module files weren't being uninstalled.
Solution:
Added them to the 'uninstall:' list...
Platforms tested:
Linux
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Purpose:
Bug fix
Description:
Several C stub functions were not releasing allocated strings.
Solution:
Fixed
Platforms tested:
Solaris 2.7
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Bug Fix
Description:
The make uninstall-examples wasn't working if fortran or C++ was
built.
Solution:
Added uninstall-examples to the Makefile.
Platforms tested:
Linux
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Code cleanup
Description:
Cleanup compiler warnings found by the SGI compiler and gcc 3.0
Platforms tested:
FreeBSD 4.5 w/gcc 3.0 (hack) && IRIX64 (modi4)
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Purpose:
Maintenance
Description:
Several compiler's warnings caused Hitachi SR8000
F90 and C compilers to fail.
Solution:
Fixed the code to eliminate warnings.
Platforms tested:
O2K (modi4) and Solaris 2.7 (arabica)
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Removing the DPSS (gridstorage) driver source code.
Description:
The DPSS (using Grid-Storage) driver is retired.
Removed the configure option with-gridstorage from configure.in.
Cvs remove the following files
./src/H5FDdpss.c
./src/H5FDdpss.h
./test/dpss_read.c
./test/dpss_write.c
Regenerated Dependencies files (some had to be hand-edited since
'make depend' did not cover them.)
Removed reference to DPSS Virtual file driver from H5F.c.
Platforms tested:
modi4 (Parallel; -with-gass=...), eirene, arabica (fortran, cxx).
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Bug Fix
Description:
Change H5Rget_object_type to H5Rget_obj_type.
Platforms tested:
Linux 2.2.x (eirene)
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Bug fix.
Description:
Fix fortran stub for H5P[gs]et_hyper_cache.
Solution:
Made the fortran subs not execute any function calls into the library,
unless v1.4 compatibility is turned on.
Elena will be following this up with a real fix.
Platforms tested:
FreeBSD 4.4 (hawkwind)
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Purpose:
Bug fix
Description:
Somehow I forgot to add DEC compiler directives to the H5Eff.f90
file. Linking failed on OSF 5.1
Solution:
Added necessary compiler directives for name translations.
Platforms tested:
Not tested yet but without this change it would fail.
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Purpose:
Maintenance
Description:
Added tests for the H5E Fortran interface
Platforms tested:
arabica and eirene
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Purpose:
Bug fix
Description:
Error messages were printed to the file and standard output regardless
of the parameters passed to the h5eprint_f function. h5eprintc function
did not close the file with the error output. Fixed.
Platforms tested:
arabica and eirene
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Purpose:
Bug fix
Description:
On NERSC SP3 configure failed while trying to figure out
how to print long long.
Solution:
Added the following line
hdf5_cv_printf_ll=${hdf5_cv_printf_ll='ll'}
Platforms tested:
Not tested yet.
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Kludge
Description:
Since we're only about halfway through converting the internal use of
property lists from the "old way" to the generic property lists, we turned
off snapshots to avoid exposing lots of API changes to users, until the
APIs settled down.
Getting the snapshots rolling again seems to have become a priority, so
some changes are going to have to be made now that were going to be
postponed until we were completely finished with the conversion. This
requires that the old API functions be able to deal with both the old
and new property lists smoothly.
Solution:
Kludge together the property list code so that they can transparently handle
dealing with both the old and new property lists
Platforms tested:
FreeBSD 4.4 (hawkwind)
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Purpose:
Small Bug Fix
Description:
Made 'install-all' its own Makefile rule.
Platforms tested:
Linux
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Purpose:
Feature Add
Description:
Added "install-example" and "install-all" to the Makefile system.
The behaviour of the "make install*" options:
make install - Installs binaries, libraries, include
files, and example programs.
make install-examples - Installs only the example programs.
The directories are:
${prefix}/doc/hdf5/examples/{c,c++,fortran}
make install-all - Install the binaries, libraries, include
files, example programs, and
documentation. The whole kit-n'-caboodle.
make uninstall-examples - Get rid of those example files (but not
the ${prefix}/doc/hdf5/examples/...
directories)
There's a new bin/ program which helps create directories which are
deeply nested called "mkdirs". It's a simple shell script.
Platforms tested:
Linux
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Code cleanup (sorta)
Description:
When the first versions of the HDF5 library were designed, I remembered
vividly the difficulties of porting code from a 32-bit platform to a 16-bit
platform and asked that people use intn & uintn instead of int & unsigned
int, respectively. However, in hindsight, this was overkill and
unnecessary since we weren't going to be porting the HDF5 library to
16-bit architectures.
Currently, the extra uintn & intn typedefs are causing problems for users
who'd like to include both the HDF5 and HDF4 header files in one source
module (like Kent's h4toh5 library).
Solution:
Changed the uintn & intn's to unsigned and int's respectively.
Platforms tested:
FreeBSD 4.4 (hawkwind)
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More code cleanups
Description:
Wrap up the code cleanups for changing the dataset transfer property lists
over to using the generic property list code.
Platforms tested:
IRIX64 6.5 (modi4)
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Code cleanups, mostly..
Description:
Work on pacifying the SGI compiler to get the generic properties working
correctly with --enable-parallel and --enable-fortran. It's not quite
fixed yet, but I need to head home and these patches help... :-/
Platforms tested:
IRIX64 6.5 (modi4)
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Bug fix.
Description:
Left an extra '}' in when I removed the v1.2.x compat stuff.
Solution:
Took the '}' out... :-)
Platforms tested:
Solaris 2.7 (arabica)
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Feature shift
Description:
Take out the v1.2.x compatibility stubs and put in the hooks for v1.4.x
compatibility when needed.
Platforms tested:
FreeBSD 4.3 (hawkwind)
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Purpose:
Regenerated Dependencies Files
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Purpose:
Bug Fix
Description:
Needed to add the PERL=@PERL@ line to the commence.in file.
Platforms tested:
LInx
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Purpose:
Bug Fix
Description:
The way we were generating Dependencies and .depend files was broken.
If the $srcdir or other macros began with a ".", then it would match
anything and cause problems since it would then overwrite the
beginning of the header file's path.
Solution:
Wrote a Perl script which can handle this type of weirdness better.
It's only used when the environment is a GNU one with a GCC
compiler...
Platforms tested:
Linux
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Purpose:
Bug fix (bug#625)
Description:
Character buffers were not copied and freed properly. That caused segmentation fault on Linux (Debian 2.2, a glibc2.1.3-based distro and gcc 2.95.2 and NAGWare Fortran 95 compiler Release 4.0a(392). Also many compilers screamed about this piece of code.
Solution:
Asked Quincey to fix the code.
Platforms tested:
Linux (eirene)
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Purpose:
F90 port to HPUX 10.20
Description:
Added F90 support for HPUX 10.20
Platforms tested:
HPUX 10.20 (sangamon)
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Purpose:
Bug Fix
Description:
Ported fix from 1.4 branch to have compiler look in the fortran/src
directory for modules.
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Purpose:
Bug Fix
Description:
the ptesthdf5_fortran.f90 program was dependent upon the THDF5
module. But before the ptesthdf5_fortran.lo file is build, the THDF5
module needs to be built.
Solution:
Put that dependency into the Makefile.
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Purpose:
Regeneration
Description:
Regenerated the configure file for the Fortran FFLAGS fix.
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Purpose:
Bug Fix
Description:
*sigh* The change I made yesterday didn't work correctly. The shell
command interpretted the line as if it were command flags.
Solution:
Removed the "()"s from around the macro name so that they can be
expanded correctly.
Platforms tested:
Linux
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Purpose:
Fix
Description:
Porting fixes from the 1.4 branch to the 1.5 branch. This fixes the
dependency problem in the testpar/ directory and also the problem
with module includes on the command line.
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Purpose:
Bug Fix
Description:
In order for libtool to point to the place zlib lives (when
specified) it needs to add that flag to the LDFLAGS macro. However,
since we're getting this information from the top-level configure,
it's cached. Thus, we don't check for it and the -L flag doesn't get
included into the LDFLAGS macro.
Solution:
Remove the cached value so that the Fortran configure will always
check for zlib even if it's found by the top-level configure.
Platforms tested:
Kelgia
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Purpose:
Typo fix
Description:
Today's daily tests failed on modi4 (pp) because of the type in the H5FDmpioff.f90
file name.
Solution:
Fixed the name.
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Bug Fix
Description:
Propagating changes from the 1.4 branch to the 1.5 branch. This
fix takes care of the problem of parallel make in the Fortran
directory.
Platforms tested:
Eirene and Modi4
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Purpose:
Sync with hdf5 1.4 branch
Description:
Brought changes made in hdf5 1.4 branch into hdf5 1.5 branch
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Purpose:
Sync with hdf5 1.4. branch
Description:
Brought changes made in the hdf5 1.4. branch into 1.5
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Purpose:
Bug Fix
Description:
Modules weren't being found correctly.
Solution:
The F9XMODFLAG was being set and used in the test{par}/ and examples/
directories, but it's also needed in the src/ directory.
Platforms tested:
Modi4...cross fingers...
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Purpose:
Bug Fix
Description:
Changed the order of the flags checking for modules from -M -I to -I
-M. Elena already fixed it in the configure ifle. This puts it in the
acsite.m4 file so that it will be propagated to future configure
builds.
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Purpose:
Maintenance on IBM SP
Description:
I used unnecessary system specific compiler falgs
Solution:
Removed unnecessary flags
Platforms tested:
NERSC IBM SP (gseaborg)
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Purpose:
Bug bypass
Description:
Fortran configure checks flags where to find F90 modules in the
order "M", "I" and "p". On IBM SP "M" is a reserved flag, configure
does not understand compiler's warning and uses it to specify
module directories. Then tests and examples compilation fails since
module directory is not specified correctly on the compilation line.
Solution:
Changed the order of flags to be "I", "M", "p", so configure on IBM SP
finds the correct flag first.
Platforms tested:
NERSC IBM SP (gseaborg)
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Purpose:
IBM SP F90 HDF5 Library port
Description:
Added necessary type definitions for the port
Platforms tested:
Tested only for 1.4. branch. 1.5 branch will be tested later.
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Purpose:
IBM SP F90 HDF5 Library port
Description:
Added necessary canges to the configuration file
Platforms tested:
Not tested yet.
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Purpose:
DEC UNIX port
Description:
Windows port caused problems on DEC UNIX.
Names of C functions called from F90 subroutines were converted
to UPPER case while DEC UNIX expected them to be in lower case.
Solution:
Added special DEC compiler directives to avoid the conflict on two
systems
Platforms tested:
Windows98, DEC UNIX, Linux
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Purpose:
HPUX 11.00 port
Description:
Redundant USE statements triggered a bug in the HP F90 compiler.
Solution:
Source code was rearranged to avoid redundancy: definitions of the
object and dataset region reference types were moved from H5Rff.f90
to H5f90global.f90; "USE H5R" statement was removed from H5Rff.f90.
Now H5Rff.f90 uses "USE H5GLOBAL" statement only as the rest of
the modules.
Platforms tested:
HPUX 11.00 (kelgia), Solaris 2.7 (arabica)
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