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* [svn-r16680] Description:Scot Breitenfeld2009-04-0716-1501/+1501
| | | | | | | | | Fixed warnings from absoft's compiler for !DEC$ statements. Solution: There should not be a space after !DEC$ statements, removed the spaces. Platforms tested: Jam with gcc and f95
* [svn-r16562] Purpose:Mike McGreevy2009-03-105-15/+15
| | | | | | | | | | | | | | | | | | Bug Fix Description: Fixing BZ #1381. The --includedir=DIR configure option, which is used to spceify installation location of C header files, did not work correctly as the path was hard-coded into config/commence.am. I'm presuming this is because an older version of automake didn't know where to put C header files. In any case, removing this line now defaults the includedir to the same directory that it is currently hard-coded to, and also fixes the configure flag which allows for customization of this value. Tested: jam, liberty
* [svn-r16519] merge 16518 from trunkPedro Vicente Nunes2009-02-265-0/+5
| | | | | | have 2 expected outputs for 2 h5ls runs depending if run on a big or little endian machine. Configure.in was modified to export a variable carrying endianess information to testh5ls.sh. This script then compares the current run with 2 expected outputs, one for a big-endian machine (linew was used to generate the output), other for little endian (jam was used to generate the output) the way h5ls prints types, it starts searching for NATIVE types first. One solution would be h5ls not to detect these native types, using for example the same print datatype function that h5dump does, that would make the output look the same on all platforms ("32-bit little-endian integer" would be printed instead). Drawback, this "native" information would not be available. Other solution is to have not one but 2 expected outputs and make the shell script detect the endianess and compare with one output or other tested: jam, linew
* [svn-r16490] Fixed bug #1459 by eliminating the macro long_long and ↵Allen Byrne2009-02-182-13/+13
| | | | | | | | | replacing all instances with long long. Tested: h5comittest fedora 10 x64 XP32, VNET
* [svn-r16363] Description:Scot Breitenfeld2009-01-271-5/+13
| | | | | | | | Merged changes from the trunk into the branch. Used the command: svn merge -r 16197:16362 http://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran Platforms tested: smirom, liberty
* [svn-r16341] Description:Frank Baker2009-01-221-1/+1
| | | | | | Changed 'THG' to 'The HDF Group' in various HDF5 source files, most of which are <subdirectory>/COPYING. -- Closes Bugzilla entry 1403.
* [svn-r16304] Description:Scot Breitenfeld2009-01-131-0/+2
| | | | | | | | | added: !DEC$ATTRIBUTES reference :: for character strings being passed in to C to fix bug in VMS for functions h5sdecode_f and h5sencode_f.
* [svn-r16263] Description:Scot Breitenfeld2009-01-051-1/+1
| | | | | | | | added missing reference in h5lget_name_by_idx_f: !DEC$ATTRIBUTES reference :: for character strings being passed in to C to fix bug in VMS.
* [svn-r16234] Description:Scot Breitenfeld2008-12-301-2/+0
| | | | | | | Cosmetic changes, Also tested -r16232 on: Jam (intel 10.1) Smirom (intel 10.1)
* [svn-r16232] Description:Scot Breitenfeld2008-12-302-13/+17
| | | | Added chunk property to the data set because changes H5Dset_extent now require/check the the data set is chunked.
* [svn-r16197] Maintenance: Merged trunk into the hdf5_1_8 branchScot Breitenfeld2008-12-1522-1040/+1522
| | | | (used svn merge -r 15741:16196 http://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran).
* [svn-r15917] Bug fix: #933Albert Cheng2008-10-211-18/+0
| | | | | | This file is no longer needed since it is not installed any more. Tested: kagiso with fortran and C++.
* [svn-r15912] Bug fix: #933Albert Cheng2008-10-212-49/+16
| | | | | | | The information of libhdf5_fortran.settings are all included in libhdf5.settings now. Remove it from the source. Tested: kagiso with fortran and C++.
* [svn-r15898] Purpose: Bug FixMike McGreevy2008-10-175-30/+5
| | | | | | | | | | | | | | | Description: Libtool wasn't working on linew because the script was not working with the Solaris Bourne shell. Libtool has built- in detection to ensure that it uses an appropriate shell, but our config/commence.am was hard coding this shell to be /bin/sh. Removing this line allows the shell to be picked up by configure, thus allowing libtool to use the correct shell on linew (bash). This was initially added to correct for a problem on an old machine (janus), so shoudn't be needed for machines we currently support. Tested: full make check install on kagiso and linew, compile only on smirom, duty, and liberty.
* [svn-r15881] Purpose: Bug Fixes, Libtool UpgradeMike McGreevy2008-10-155-0/+25
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: 1) configure now sets LD_LIBRARY_PATH before checking for presence of SZIP encoder, so user does not need to set this. The path is then saved and sent to Makefiles, and used when "make check-install" is invoked, so user doesn't need to set this manually. 2) Upgraded libtool to version 2.2.6a 3) Rearranged tools build order as h5dump depends on existence of h5diff and h5import. Since h5dump is a sister directory as opposed to a parent of either, it doesn't know about the build rules of these tools, so setting any sort of explicit dependency confuses automake as it won't know how to build the tools. Instead, setting CONFIG = ordered forces an in-order traversal of each tools subdirectory. (without it will also traverse in order by default, but this should prevent gmake's -j option from jumping ahead as well). 'make check install' should now be able to be invoked after 'configure' without causing a dependency failure. 4) Removed H5_HAVE_LARGE_HSIZET macro from vms/src/h5pubconf.h, as this macro has now been out of the code for some time. (vms pubconf needs to be updated manually, which is why it was still hanging around). Tested: kagiso, smirom, liberty Note: h5diff looks to be causing failures in h5copy and h5dump tools tests, though these were present before any of my changes. My changes only affect build order and configuration setup, and shouldn't prevent fixes for these failures coming in after this checkin. Other than these, tests pass fine.
* [svn-r15812] Bug fix: #1090Albert Cheng2008-10-082-8/+8
| | | | | | | | | | | The custom rules for installing h5cc, h5fc, and the fortran modules in fortran and in hl/fortran don't use $(DESTDIR). Added it to all those rules. Tested: kagiso both serial and parallel with fortran and cxx enabled. Tested by: make install make DESTDIR=/tmp/acheng install diff -r /tmp/acheng/.../hdf5 hdf5
* [svn-r15742] Maintenance: Merged new Fortran Features and tests from trunk ↵Scot Breitenfeld2008-10-019-21/+124
| | | | | | | into hdf5_1_8 branch (used svn merge -r 14941:15740 http://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran command).
* [svn-r15727] Scot Breitenfeld2008-09-3035-5712/+4528
| | | | | | Maintenance: Merged new Fortran Features and tests from trunk into hdf5_1_8 branch (used svn merge -r 14941:14525 http://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran command).
* [svn-r15707] I changed the return values of H5Fget_obj_ids and ↵Raymond Lu2008-09-264-19/+43
| | | | | | | | H5Fget_obj_count to ssize_t and modified C++ and Fortran API functions. This is for bug #1245. Tested on kagiso - I've tested the same change using h5committest.
* [svn-r15644] Description:Scot Breitenfeld2008-09-171-1/+1
| | | | Fixed print spacing issue.
* [svn-r15640] Description:Scot Breitenfeld2008-09-173-4/+214
| | | | Added test routines for h5t_get/set_fields_f.
* [svn-r15631] Description:Scot Breitenfeld2008-09-161-4/+3
| | | | | | | | | | | | | | | | | | | | | | | | | | In nh5tget_offset_c: (1) The return value type of H5Tget_offset was set to size_t where it should be of type int. (2) Was if offset was equal to 0 it returned the error code of -1 back to Fortran, this was changed to return an error code of -1 when the offset value is < 0. In h5tget_norm_c: (1) was if the return value of H5Tget_norm = 0 it would return an error code to Fortran, but from enum of the return value: typedef enum H5T_norm_t { H5T_NORM_ERROR = -1, /*error */ H5T_NORM_IMPLIED = 0, /*msb of mantissa isn't stored, always 1 */ H5T_NORM_MSBSET = 1, /*msb of mantissa is always 1 */ H5T_NORM_NONE = 2 /*not normalized */ /*H5T_NORM_NONE must be last */ } H5T_norm_t; only when -1 is returned is there an error, changed it to return an error only if the value of H5T_NORM_ERROR = -1.
* [svn-r15629] Description:Quincey Koziol2008-09-1612-377/+377
| | | | | | | | | | | | | Remove trailing whitespace from C/C++ source files, with the following script: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Tested on: Mac OS X/32 10.5.5 (amazon) No need for h5committest, just whitespace changes...
* [svn-r15583] Purpose: Add Windows Fortran DLL export code to separate DEF file.Scott Wegner2008-09-0315-1744/+523
| | | | | | | | | | Description: In in Fortran source code, there was a great deal of code that was necessary for Windows DLLs, and ignored for others systems. To remove some of the bloat in the source code, we moved these definitions into separate *.def file, which will be used on by the Windows DLL project. Tested: VS2005 on WinXP Note: The Windows project file will still need to be edited-- I will check that in soon.
* [svn-r15463] Description:Quincey Koziol2008-08-121-2/+2
| | | | | | | | Bring revision 15462 (compiler warnings) back from trunk. Tested on: Mac OS X/32 10.5.4 (amazon) w/FORTRAN & C++ (Too minor to require h5committest)
* [svn-r15424] Description:Scot Breitenfeld2008-07-291-1/+1
| | | | Fixed the error of passing an array to a scalar.
* [svn-r15419] Description:Scot Breitenfeld2008-07-281-1/+1
| | | | | | | | Initialized a string with a space instead of a blank i.e. var = '' is now var = ' ' This fixes a problem with AIX for bug 1252
* [svn-r15416] Description:Scot Breitenfeld2008-07-281-19/+19
| | | | | | | Changed the INTENT for total_error to be consistantly INTENT(INOUT) as noted in bug 1251
* [svn-r15415] Description:Scot Breitenfeld2008-07-281-109/+109
| | | | | | | | | | | | | | | | | Added missing comma, i.e. WRITE(*, "("" subroutine i"" i2.2,""()"")") j should be WRITE(*, "("" subroutine i"", i2.2,""()"")") j etc... as noted in bug 1251 and NAG compiler. Checked the write fix using Sun f95, g95, pgf90, gfortran, ifort, absoft and all gave the correct write output.
* [svn-r15379] Description:Scot Breitenfeld2008-07-163-149/+212
| | | | Added optional "mounted" parameter to H5Gget_info_f, H5Gget_info_by_idx_f, H5Gget_info_by_name_f
* [svn-r15255] Description:Scot Breitenfeld2008-06-205-3/+92
| | | | | Added the function h5tget_native_type and associated requirements.
* [svn-r15181] Purpose: _WIN32 macro cleanupScott Wegner2008-06-091-4/+0
| | | | | | | | | | Description: As part of our Windows cleanup, we try to remove windows-specific tweaks in the source code. There are many instances where Windows code is introduces via ifdef's. We re-evaluate whether they are still required, and found that many of them are not. Others we change to "feature"-specific code, rather than Windows-specific. Tested: VS2005 on WinXP VS.NET on WinXP h5committest (kagisopp, smirom, linew)
* [svn-r15063] Description:Scot Breitenfeld2008-05-211-4/+4
| | | | Added processor id in failure messages for MPI.
* [svn-r15062] Description:Scot Breitenfeld2008-05-213-573/+583
| | | | | | | | | Removed extra MPI calls in subroutine by just passing MPI variables into subroutines. Added checks for MPI errors. Cleaned-up formatting.
* [svn-r15059] Maintenance: File space identifier was not closed causing ↵Elena Pourmal2008-05-211-1/+3
| | | | | | memory growth; fixed Platforms tested: kagiso (minor fix)
* [svn-r15042] Bug fix.Albert Cheng2008-05-209-37/+41
| | | | | | | | | | | | | | | | | | | Description: The fortran Makefile.am used HDF_FORTRAN to indicate it is part of the Fortran API source so that conclude.am will give fortran api prefix in the test output. The symbox HDF_FORTRAN is also used in configure for a different purpose (indicated --enable-fortran). They conflicted. Similar problem for the symbol HDF_CXX. Solution: Changed all the involved Makefile.am to use "FORTRAN_API" instead. It is a more appropriate name. Same for CXX_API. Along the way, discovered that the Makefile.am of hl/fortran/test and hl/cxx/test did not have those symbols at all. Added them in. Platform tested: Kagiso serial and h5committested (kagisopp, smirom, linew).
* [svn-r15033] Purpose:Albert Cheng2008-05-195-13/+84
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Improvement. Description: src/libhdf5.settings was the initial configure summary and is installed. Then configure is changed to dump a summary of the configure settings to the output and also append it to src/libhdf5.settings. That created two different output formats and duplicated information. This is the initial attempt to clean up this confusion and unify the output format. It is decided to use the src/libhdf5.settings template as the unified means. This requires more macros symbols be defined. The following symbols are all related to generating the src/libhdf5.settings file. AC_SUBST(EXTERNAL_FILTERS) AC_SUBST(MPE) MPE=no AC_SUBST(STATIC_EXEC) STATIC_EXEC=no AC_SUBST(HDF_FORTRAN) HDF_FORTRAN=no AC_SUBST(FC) HDF_FORTRAN=no AC_SUBST(HDF_CXX) HDF_CXX=no AC_SUBST(CXX) HDF_CXX=no AC_SUBST(HDF5_HL) HDF5_HL=yes AC_SUBST(GPFS) GPFS=no AC_SUBST(LINUX_LFS) LINUX_LFS=no AC_SUBST(INSTRUMENT) INSTRUMENT=no AC_SUBST(CODESTACK) CODESTACK=no AC_SUBST(HAVE_DMALLOC) HAVE_DMALLOC=no AC_SUBST(DIRECT_VFD) DIRECT_VFD=no AC_SUBST(THREADSAFE) THREADSAFE=no AC_SUBST(STATIC_SHARED) AC_SUBST(enable_shared) AC_SUBST(enable_static) AC_SUBST(UNAME_INFO) UNAME_INFO=`uname -a` The src/libhdf5.settings.in has CONDITIONAL's added to it too. The untrue conditions turned into a "#" and these lines are cleaned by the post processing script. Platform tested: h5committest on kagiso, smirom and linew. (smirom had failures not due to my changes.)
* [svn-r15029] Maintenance: Fixed a commentElena Pourmal2008-05-181-1/+1
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* [svn-r15027] Maintenance: Fixed a typo in the fortran h5tget(set)_fields_f ↵Elena Pourmal2008-05-181-23/+29
| | | | | | | subroutines. Platfomrs tested: kagiso with Intel compilers (this is bug 1046, I am not closing it since there is no test for those routines yet)
* [svn-r15018] Maintenance: Brought changes from th etrunk to 1.8 branch.Elena Pourmal2008-05-167-97/+98
| | | | | Platforms tested: kagiso with g95, Intel and PGI compilers and with -i8 flag smirom with g95 and -i8 flag, duty with gfortran42
* [svn-r15006] Purpose: configure cleanupMike McGreevy2008-05-155-5/+0
| | | | | | | Description: cleaning up configure related to removal of --disable-hsizet flag, which we no longer support. Tested: kagiso
* [svn-r14992] Maintenance: Brought changes from trunk into 1.8 branchElena Pourmal2008-05-134-11/+11
| | | | Platforms tested: kagiso, will do more testing later with -i8 flag.
* [svn-r14986] Purpose: Add Windows fixes for new Fortran code.Scott Wegner2008-05-123-3/+3
| | | | | | | | Description: There were a number of small tweaks we needed to make to add the new fortran_1_8 code on Windows. We create new project files, add new source to them, add the test to our test suite, and fix a few typos in the Windows-specific source code. Tested: VS2005 on WinXP
* [svn-r14964] merged the fortran trunk into the branch, used the command:Scot Breitenfeld2008-05-095-36/+65
| | | | (svn merge -r 14942:14963 http://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran)
* [svn-r14959] Maintennce: IRIX compiler exposed a problem in one of the new ↵Elena Pourmal2008-05-091-1/+4
| | | | | | APIs. Fixed. Platforms tested: kagiso and UCAR IRIX machine
* [svn-r14957] Fixed integer type mismatch in c functionScot Breitenfeld2008-05-092-2/+2
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* [svn-r14956] re-instated the test_attr_dense_open routine for debuggingScot Breitenfeld2008-05-081-2/+3
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* [svn-r14951] Check in fixes for compilation errors on tungsten.HDF Tester2008-05-074-8/+5
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* [svn-r14942] Maintenance: Merged new Fortran APIs and tests from trunk into ↵Elena Pourmal2008-05-0647-1975/+19582
| | | | | | | | | | | hdf5_1_8 branch (used svn merge -r 14505:14941 http://svn.hdfgorup.uiuc.edu/hdf5/trunk/fortran command). Updated MANIFEST Disabled -O3 optimization for gcc 4.3 (long due check-in) Platforms tested: kagiso with PGI compilers, smirom with g95 and v16 option, linew
* [svn-r14824] Purpose: Updating HDF5 1.8 to use automake 1.10.1 and ↵Mike McGreevy2008-04-105-65/+86
| | | | | | | | | | | | | | | | | | libtool 2.2 Description: Updated bin/reconfigure script to reflect the new versions of libtool and automake in the /home1/packages/ directory. Rearranged configure.in script. For some reason, when using libtool 2.2, the libtool script doesn't generate until later in the configuration process, so I had to move a test that parsed through the libtool script to a point after where it was actually being generated. Ran libtoolize on the project, and ran bin/reconfigure to regenerate configure and Makefile.in's throughout. Tested: kagiso, smirom, linew, tg-login
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