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* [svn-r24728] Description:Quincey Koziol2014-02-212-65/+35
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r24726 & r24727 from trunk to 1.8 branch: Description: Revert some earlier usage of strncpy, which was incorrect. Bring Coverity changes from branch back to trunk: r20821: Use HDstrncpy. --gh (Fixed already, with strdup) r20822: (Not merged, incorrect use of HDstrncpy()) r20823: (Not merged, incorrect use of HDstrncpy()) r20824: Maintenance: Bug fix: addressed CID 666. Value stored at *expression_len should be used in the call to HD5packFstring to avoid overflow (and unnecessary arithmetic calculation and casting) r20825: Issue 642: Added check for error and handler with print to stderr and exit. r20826: Undo revision 20818, as that issue has already been fixed in the 1.8 branch and trunk (but not coverity branch) r20827: (Not merged, incorrect use of HDstrncpy()) r20828: Use HDstrncpy. --gh (Corrected use of strncpy()) r20829: Check return of H5Lget_val(print_udata->fid, path, targbuf, linfo->u.val_size + 1, H5P_DEFAULT) and if error set trgbuf[0] to 0. Check if H5Lunpack_elink_val(targbuf, linfo->u.val_size, NULL, &filename, &objname) was successful and allow print. Otherwise filename and objname are not created. (init those to NULL) r20830: resolved coverity issues 939, 940, 941, 944, and 947. all were complaints about use of sprintf, and in all cases, the buffers used were large enough for all eventualities. Resolved issue by replacing calls to sprintf with calls to snprintf. r20831: Maintenance: Addressed CID 852 Replaced sprintf with snprintf r20832: Purpose: Fix valgrind issues with hl/examples/ex_image2 Description: Modified hl/examples/ex_image2 to free global "gbuf" before exit. Tested on: Mac OSX/64 10.9.1 (amaon) w/C++, FORTRAN & Threadsafety (too minor to require h5committest)
* [svn-r24684] Add IF SHARED block around Windows PDB file generation command.Allen Byrne2014-02-041-3/+4
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* [svn-r24651] Merged changes in the fortran directory from the trunk into the ↵Scot Breitenfeld2014-01-2712-57/+67
| | | | | | | | branch, svn merge -r23351:24650 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran . Tested: jam (gcc, intel), koala (gcc)
* [svn-r24393] Cleanup testfiles from scripts. Update lists of files to be ↵Allen Byrne2013-11-011-0/+24
| | | | | | cleaned. CMake update to clean testfiles. Tested: local cmake, autotools
* [svn-r24259] Maintenance: Updated version number to 1.8.13-snap0; cleaned up ↵Elena Pourmal2013-10-071-1/+1
| | | | | | RELEASE.txt for new info. The 1.8 branch is open now for code changes.
* [svn-r24201] Merged changes from trunk revisions 23431, 23527 and 24077.Larry Knox2013-09-251-4/+16
| | | | | | | | | | Switched default to link to shared lib files when HDF5 is configure with --disable-static. This addressed HDFFV-8141, h5cc failed because it defaulted to link to lib*.a files which aren't built with --disable-static. -help message also updated. Tested in trunk. Merged code tested with h5committest.
* [svn-r24180] HDFFV-8321:Add note about changing FFLAGS to FCFLAGS in configure.Allen Byrne2013-09-201-12/+12
| | | | Merged INSTALL and h5fc.in from trunk.
* [svn-r24112] Description:Quincey Koziol2013-09-062-15/+21
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r24101 & 24111 from trunk to 1.8 branch: r24101: ======= Description: Clean up warnings, enable new compiler warning flag(s) and bring back changes from Coverity branch: r20813: Remove the dead code as listed for coverity bug #1722. h5committested. r20814: Issue 69: Check return value and throw error if negative return. Also free datatype id on error r20815: Use HDstrncpy. --gh r20816: Replaced one last HDstrcat call with HDstrncat to resolve coverity issue 832. r20817: Use HDstrncpy and HDstrncat. --gh r20818: Purpose: Fix valgrind issues with h5jam Description: Modified h5jam to free strings strdup'd in parse_command_line before exit. Note that they may still not be freed in case of error, due to the widespread use of exit(). r20819: Issue 80: change loop to use int as loop index. r20820: Maintenance: Fixed the bug found by coverity CID 788 There were two problems with this function: 1) it tried to unnecessary free NULL pointer 2) it tried to allocate c_name buffer that is done by H5Pget_class_name r24111: ======= Description: Restrict GCC diagnostic pragmas to only gcc 4.6+ Tested on: Mac OSX 10.8.4 (amazon) w/gcc 4.8.1, C++ & FORTRAN (too minor to require h5committest)
* [svn-r24072] Merge trunk cmake changes to 1.8 branch. Allen Byrne2013-08-266-36/+67
| | | | | | | Also add default switch blocks to h5import. Merge h5dump any_path option from trunk. Tested: local linux
* [svn-r24021] Description:Quincey Koziol2013-08-182-3/+0
| | | | | | | | | | Bring r24020 from trunk to 1.8 branch: Clean up compiler warnings Tested on: Mac OSX/64 10.8.4 (amazon) w/C++ & FORTRAN (too minor to require h5committest)
* [svn-r23771] HDFFV-8434,-8437,-8445,-8447,-8461: Merge changes from Trunk.Allen Byrne2013-06-144-11/+13
| | | | Tested: local linux
* [svn-r23687] Bug fix: HDFFV-8435Albert Cheng2013-05-091-2/+2
| | | | | | | | | | | | | | | | | | | | | | | | | Need to update libtool version number for v1.8.11 since two functions, H5Pget_dxpl_multi and H5Pset_dxpl_multi were removed. Then v1.8 is now v1.8.12-xxx and needed an update to. config/lt_vers.am: libtool information is changed to 8.0.1 because it is a revision different from v1.8.10. configure: src/Makefile.in: hl/src/Makefile.in: hl/c++/src/Makefile.in: hl/fortran/src/Makefile.in: c++/src/Makefile.in: fortran/src/Makefile.in: README.txt: autogenerated by bin/reconfiure. Tested: h5committest, then visual inspect that the libhdf5.so.x.y.z is changed accordingly. Built in duck by hand and see it changes to libhdf5.8.dylib too.
* [svn-r23629] HDFFV-8368: Merge removal of include sub-folders from trunkAllen Byrne2013-04-251-3/+3
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* [svn-r23567] Post v1.8.11 branch-off, changed version to 1.8.12-snap0.Albert Cheng2013-04-091-1/+1
| | | | | | Reset RELEASE.txt for next release (1.8.12). Tested: h5committest.
* [svn-r23541] Reverted changes merged unintentionally with revision 23488 ↵Larry Knox2013-04-031-24/+1
| | | | | | from trunk that will not go into the 1.8.11 release. Tested with h5committest.
* [svn-r23488] merged windows dll changes from the trunk to the branch.Scot Breitenfeld2013-03-293-21/+46
| | | | | | svn merge -r23351:23487 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran . Tested: windows.
* [svn-r23352] merged -r22826:23050 and -r23060:23351 from trunk into branch.Scot Breitenfeld2013-03-1572-1363/+4339
| | | | Tested: jam (gnu, intel)
* [svn-r23330] Merged r23325 from the trunk into the branch.Scot Breitenfeld2013-03-067-448/+616
| | | | Tested: jam (intel)
* [svn-r23324] Snapshot version 1.8 release 11 (snap11)HDF Tester2013-03-045-5/+5
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* [svn-r23218] Comment out new fortran functions not yet merged from trunkAllen Byrne2013-02-011-9/+9
| | | | Tested: windows
* [svn-r23214] Remove obsolete fileAllen Byrne2013-01-311-529/+0
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* [svn-r23211] Merge trunk CMake changes for minimum cmake version of 2.8.10. ↵Allen Byrne2013-01-316-19/+64
| | | | | | This was prompted by HDFFV-8227, OS X requires latest version of cmake for proper support. Tested: local linux
* [svn-r22926] Revert change to h5fc.in (3 line comment + 1 line ineffective ↵Larry Knox2012-10-181-4/+0
| | | | | | | | code) that was inadvertently me rged from trunk before it was reverted there. Tested change on trunk and 1.8.10 branch with h5committest, make install and make installcheck on jam koala and ostrich.
* [svn-r22892] Increment release branch for future release (v1.8.11).Albert Cheng2012-10-121-1/+1
| | | | | | Set version number to 1.8.11-snap0. Clear out RELEASE.txt to hold 1.8.11 changes Update version references in RELEASE.txt
* [svn-r22869] Add PROVISIONAL tag to function name to match non-parallel version.Allen Byrne2012-10-081-1/+2
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* [svn-r22858] Change def list of RGET_REGION to match other types declarationsAllen Byrne2012-10-031-2/+1
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* [svn-r22844] Merged changes from the trunk into the branch.Scot Breitenfeld2012-09-282-2/+18
| | | | Tested: jam (gnu, mpich)
* [svn-r22840] Merged changes from the trunk into the branch,Scot Breitenfeld2012-09-2822-311/+796
| | | | | | | svn merge -r22479:22826 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran tested: jam (gnu, intel, pgi) koala (gnu, pgi)
* [svn-r22724] Convert tests to *.sh.in.Allen Byrne2012-08-287-88/+89
| | | | | | | | Convert configure.in to configure.ac. Align TESTS usage with autotools convention. Update all references from configure.in to configure.ac Tested: h5committest
* [svn-r22719] Fix RelWithDebInfo packagingAllen Byrne2012-08-281-1/+1
| | | | Tested: windows
* [svn-r22711] Updated autotools: autoconf 2.69, automake 1.12.3, m4 1.4.16, ↵Larry Knox2012-08-235-311/+503
| | | | | | libtool 2.4.2 Tested THG machines.
* [svn-r22509] Merged changes from the trunk into the branch:Scot Breitenfeld2012-07-036-110/+321
| | | | | | | svn merge -r 22163:22479 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran Fixed merged issue with fortran/test/tH5E_F03.f90 (missing part of the file) and changed Makefile.am accordingly.
* [svn-r22503] Maintenance: Elena Pourmal2012-06-292-4/+12
| | | | | | | | | See HELPDESK-643 issue in JIRA. NAG Fortran compiler doesn't like the current tH5E_F03.f90 file that has only comments and no executable statements. Removed tH5E_F03.f90 from the list of modules to build. Tested on jam with PGI compiler using --enable-fortran2003 flag. Will point the user to a snapshot when it is available.
* [svn-r22483] Maintenance:Elena Pourmal2012-06-231-21/+1
| | | | | | | | - Fixed a typo in return value of the nh5dread_f_c function ( was 1 instead of 0 on success); fixed the return value to make it consistent with other Fortran functions; cleaned the code from debug statements. Platforms tested: jam with GNU and Intel compilers, fortran 2003 feature.
* [svn-r22451] Brought cmake configuration / configure changes from Trunk.Allen Byrne2012-06-111-0/+4
| | | | Tested jam, local linux
* [svn-r22359] Change library source properties: remove "LANGUAGE C" property ↵Allen Byrne2012-05-141-4/+7
| | | | | | from headers. Add "LINKER C" property to link. Tested: local linux
* [svn-r22339] config/examples.amLarry Knox2012-05-021-0/+9
| | | | | | | Added code to install README in share/hdf5_examples Set permissions on README file to rw-r--r--. Tested with h5committest, make install and make uninstall.
* [svn-r22268] Update 1.8 branch version to 1.8.10-snap0Mike McGreevy2012-04-091-1/+1
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* [svn-r22205] Brought changes from the trunk in the the branch, used:Scot Breitenfeld2012-03-3010-82/+364
| | | | | | svn merge -r r21721:22163 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran Tested: jam (gnu)
* [svn-r22196] Add PASS_REGULAR_EXPRESSION property to fortran tests to verify ↵Allen Byrne2012-03-291-0/+3
| | | | | | 0 errors. Some platforms do not return proper value in CMake ADD_TEST and results in a false positive. Brought from trunk
* [svn-r22148] Removed incorrect executable svn properties from text, source, ↵Dana Robinson2012-03-264-0/+0
| | | | in, and HDF5 files.
* [svn-r21805] Update CMake Required version in all folders to match current ↵Allen Byrne2011-12-055-5/+5
| | | | standard 2.8.6
* [svn-r21763] HDFFV-7798: CMake on linux. Corrected path component in ↵Allen Byrne2011-11-151-8/+19
| | | | fortran/src and hl/fortran/src and the install command.
* [svn-r21731] Brought revisions 21719 and 21720 from the trunk, fixes test ↵Scot Breitenfeld2011-11-082-38/+38
| | | | | | | | failures on Mac and race condition with make check -j#. Tested: jam (gnu)
* [svn-r21717] Update cmake configurationAllen Byrne2011-11-045-17/+33
| | | | | | | Update cmake to generate source folders in VS Brought parallel changes from trunk Tested: local linux
* [svn-r21694] Brought r21689 into the tunk, fixes type in H5Eset_error_c.Scot Breitenfeld2011-10-311-1/+1
| | | | Tested: jam (gfortran)
* [svn-r21693] Brought r21691,r21690 to the branch, which:Scot Breitenfeld2011-10-312-10/+2
| | | | | | | Removed not needed test in fortranlib_test_F03.f90 and made fortranlib_test_1_8.f90 standard compliant. tested: jam (gnu compiler)
* [svn-r21638] Update 1.8 branch version to 1.8.9-snap0Mike McGreevy2011-10-211-1/+1
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* [svn-r21633] Description: changed comments in h5offsetof, no source changes.Scot Breitenfeld2011-10-211-0/+3
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* [svn-r21632] Description:Scot Breitenfeld2011-10-202-2/+0
| | | | | | | | | | | | Removed line: $(RM) $(DESTDIR)$(includedir)/H5f90i*.h These *.h files are needed for HL_NPOESS and should not be removed when make clean is specified. The Daily Test installs the file using the deploy script, but then runs make clean which removes the file, so the files are not there when we try to compile HL_NPOESS causing an error.
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