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* [svn-r24903] Correct mod install listsAllen Byrne2014-03-261-15/+14
| | | | Tested: local linux
* [svn-r24899] Add msmpi fortran libs to FindMPIAllen Byrne2014-03-251-1/+5
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* [svn-r24895] Add INTERFACE properties to libsAllen Byrne2014-03-252-5/+17
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* [svn-r24888] Cleaned-up warning errors using --enable-fortran only and gcc 4.8.2Scot Breitenfeld2014-03-241-4/+6
| | | | tested: gcc (4.8.2, jam)
* [svn-r24886] Fix fortran mod file handling and packingAllen Byrne2014-03-241-4/+55
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* [svn-r24876] Move includes command up before all programsAllen Byrne2014-03-241-2/+2
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* [svn-r24866] Fixed compiler warnings using gnu 4.8.1 Scot Breitenfeld2014-03-228-58/+65
| | | | Tested: jam( intel, gnu, pgi)
* [svn-r24864] Description:Quincey Koziol2014-03-219-162/+1
| | | | | | | | | | | | | | | | | | Remove all traces of MPI-POSIX VFD and GPFS detection/code. Remove remaining traces of stream VFD. Remove testpar/t_posix_compliant test (it's not actually verifying anything). Clean up H5D__mpio_opt_possible() further. Moved environment variable that disables MPI collective operations into MPI-IO VFD (instead of it being in src/H5S.c). A few other small code cleanups. Tested on: Mac OSX/64 10.9.2 (amazon) w/parallel & serial
* [svn-r24859] Remove unnecessary use of $(srcdir).before_removing_mpiposix_vfdAllen Byrne2014-03-212-18/+5
| | | | Tested: local linux, h5committest
* [svn-r24856] added missing common statementScot Breitenfeld2014-03-211-0/+1
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* [svn-r24855] added missing dllexportScot Breitenfeld2014-03-211-0/+1
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* [svn-r24846] Bug fix for HDFFV-8689 : Mix-match of type in ↵Scot Breitenfeld2014-03-204-44/+57
| | | | | | H5D_CHUNK_CACHE_NBYTES_DEFAULT, Review HDF5-184 Tested with -i8 flag with intel compilers and --enable-production
* [svn-r24824] HDFFV-8700 -Allen Byrne2014-03-181-4/+4
| | | | | | | | KitWare recommendations: Change CMake commands to lower case. Bump up CMake minimum versions. Split test file into separate file for h5repack test. Tested: local linux
* [svn-r24789] Bump up the minimum cmake versionAllen Byrne2014-03-135-5/+5
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* [svn-r24783] fixed typoScot Breitenfeld2014-03-121-1/+1
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* [svn-r24782] HDFFV-8700 -Allen Byrne2014-03-114-14/+14
| | | | KitWare recommendations: Change CMake commands to lower case.
* [svn-r24781] HDFFV-8700 -Allen Byrne2014-03-117-219/+219
| | | | | | | KitWare recommendations: Change CMake commands to lower case. Remove INCLUDE_DIRECTORIES in src for target level includes. Change ADD_DEFINITIONS package debug defines into CMake option. Remove -DNDEBUG
* [svn-r24770] Snapshot version 1.9 release 174HDF Tester2014-03-091-1/+1
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* [svn-r24753] Snapshot version 1.9 release 173HDF Tester2014-03-021-1/+1
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* [svn-r24727] Description:Quincey Koziol2014-02-211-12/+12
| | | | | | | | | Revert change of sprintf -> snprintf, due to failures on Windows. We'll need to figure out the correct course of action in the future. Tested on: MacOSX/64 10.9.1 (amazon) w/C++, FORTRAN (too minor to require h5committest)
* [svn-r24726] Description:Quincey Koziol2014-02-202-77/+47
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Revert some earlier usage of strncpy, which was incorrect. Bring Coverity changes from branch back to trunk: r20821: Use HDstrncpy. --gh (Fixed already, with strdup) r20822: (Not merged, incorrect use of HDstrncpy()) r20823: (Not merged, incorrect use of HDstrncpy()) r20824: Maintenance: Bug fix: addressed CID 666. Value stored at *expression_len should be used in the call to HD5packFstring to avoid overflow (and unnecessary arithmetic calculation and casting) r20825: Issue 642: Added check for error and handler with print to stderr and exit. r20826: Undo revision 20818, as that issue has already been fixed in the 1.8 branch and trunk (but not coverity branch) r20827: (Not merged, incorrect use of HDstrncpy()) r20828: Use HDstrncpy. --gh (Corrected use of strncpy()) r20829: Check return of H5Lget_val(print_udata->fid, path, targbuf, linfo->u.val_size + 1, H5P_DEFAULT) and if error set trgbuf[0] to 0. Check if H5Lunpack_elink_val(targbuf, linfo->u.val_size, NULL, &filename, &objname) was successful and allow print. Otherwise filename and objname are not created. (init those to NULL) r20830: resolved coverity issues 939, 940, 941, 944, and 947. all were complaints about use of sprintf, and in all cases, the buffers used were large enough for all eventualities. Resolved issue by replacing calls to sprintf with calls to snprintf. r20831: Maintenance: Addressed CID 852 Replaced sprintf with snprintf r20832: Purpose: Fix valgrind issues with hl/examples/ex_image2 Description: Modified hl/examples/ex_image2 to free global "gbuf" before exit. Tested on: Mac OSX/64 10.9.1 (amaon) w/C++, FORTRAN & Threadsafety (too minor to require h5committest)
* [svn-r24716] Snapshot version 1.9 release 172HDF Tester2014-02-161-1/+1
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* [svn-r24698] Snapshot version 1.9 release 171HDF Tester2014-02-091-1/+1
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* [svn-r24697] Fix for:Scot Breitenfeld2014-02-071-0/+1
| | | | | | HDFFV-8651: H5F_Provisional missing from HDF5mpio.f90 Tested: jam (mpi 3.0.4/gnu)
* [svn-r24682] Add IF SHARED block around Windows PDB file generation command.Allen Byrne2014-02-041-3/+4
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* [svn-r24676] Snapshot version 1.9 release 170HDF Tester2014-02-021-1/+1
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* [svn-r24636] typesetting changes for documentationScot Breitenfeld2014-01-171-9/+10
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* [svn-r24623] Enabled test for Scot Breitenfeld2014-01-081-6/+2
| | | | | | | HDFFV-8268 Fortran wrapper for H5Fget_file_image function Tested: jam (pgi compilers) h5committest
* [svn-r24611] This is a partial fix for HDFFV-8634. It fixes the problem ↵Scot Breitenfeld2014-01-061-2/+2
| | | | | | without --enable-fortran2003, where the optional parameter should not be given as an option for an interface to a C function. --enable-fortran2003 does not work due to a compiler bug in intel 14.0 Tested: kite (intel 14.0 with --enable-fortran)
* [svn-r24465] Snapshot version 1.9 release 169HDF Tester2013-11-251-1/+1
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* [svn-r24392] Cleanup testfiles from scripts. Update lists of files to be ↵Allen Byrne2013-11-011-0/+24
| | | | | | cleaned. CMake update to clean testfiles. Tested: local cmake, autools, and h5committest
* [svn-r24376] Updated all code to use HDmalloc, HDcalloc, and HDfree.Dana Robinson2013-10-312-22/+22
| | | | | | | | | | | | | Prep work for adding a memory free function, part of HDFFV-8551. Tested on: 32-bit LE linux (jam) * with C++, Fortran * with thread safety on These are minor changes (almost entirely renaming foo functions to HDfoo) that don't change functionality. This should not require a full commit test.
* [svn-r24362] Snapshot version 1.9 release 168HDF Tester2013-10-271-1/+1
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* [svn-r24334] Snapshot version 1.9 release 167HDF Tester2013-10-201-1/+1
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* [svn-r24287] Snapshot version 1.9 release 166HDF Tester2013-10-131-1/+1
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* [svn-r24218] Snapshot version 1.9 release 165HDF Tester2013-09-291-1/+1
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* [svn-r24194] Don't add hdf5 library dependencies to lib files when ↵Larry Knox2013-09-246-4/+14
| | | | | | --disable-sharedlib-rpath configure option is invoked. Fix for HDFFV-8276. Tested with h5committest and on hdf-duck.
* [svn-r24186] Snapshot version 1.9 release 164HDF Tester2013-09-221-1/+1
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* [svn-r24114] Reverting the changes in r24113 for now because they break ↵Larry Knox2013-09-0621-79/+2
| | | | | | parallel make fortran. The changes aren't incorrect, but more work in needed on dependencies and also for enable-parallel. Reverted to r24112.
* [svn-r24113] Description:Quincey Koziol2013-09-0621-2/+79
| | | | | | | | Reduce warnings w/gfortran in FORTRAN build by declaring interface for utility test routines. Tested on: Mac OSX/64 10.8.4 (amazon) w/gcc/g++/gfortran 4.8
* [svn-r24101] Description:Quincey Koziol2013-09-052-15/+21
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Clean up warnings, enable new compiler warning flag(s) and bring back changes from Coverity branch: r20813: Remove the dead code as listed for coverity bug #1722. h5committested. r20814: Issue 69: Check return value and throw error if negative return. Also free datatype id on error r20815: Use HDstrncpy. --gh r20816: Replaced one last HDstrcat call with HDstrncat to resolve coverity issue 832. r20817: Use HDstrncpy and HDstrncat. --gh r20818: Purpose: Fix valgrind issues with h5jam Description: Modified h5jam to free strings strdup'd in parse_command_line before exit. Note that they may still not be freed in case of error, due to the widespread use of exit(). r20819: Issue 80: change loop to use int as loop index. r20820: Maintenance: Fixed the bug found by coverity CID 788 There were two problems with this function: 1) it tried to unnecessary free NULL pointer 2) it tried to allocate c_name buffer that is done by H5Pget_class_name Tested on: Mac OSX 10.8.4 (amazon) w/gcc 4.8.1, C++ & FORTRAN (too minor to require h5committest)
* [svn-r24092] Snapshot version 1.9 release 163HDF Tester2013-09-011-1/+1
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* [svn-r24077] Updated -help output for compile scripts for changing default ↵Larry Knox2013-08-271-4/+6
| | | | | | from -noshlib to -shlib when hdf5 is built without static libraries (--disable-static). Tested with h5committest on jam, koala, ostrich and platypus.
* [svn-r24068] Snapshot version 1.9 release 162HDF Tester2013-08-251-1/+1
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* [svn-r24029] Move TESTS to seperate file to allow easier editing by all ↵Allen Byrne2013-08-196-36/+67
| | | | | | developers. Tested: local linux
* [svn-r24020] Description:Quincey Koziol2013-08-172-3/+0
| | | | | | | | Clean up compiler warnings Tested on: Mac OSX/64 10.8.4 (amazon) w/C++ & FORTRAN (too minor to require h5committest)
* [svn-r24004] HDFFV-8319 and -8321: Cleanup autotools code.Allen Byrne2013-08-131-12/+12
| | | | | | Also remove GetConsoleScreenInfo check from cygwin configure. Tested: h5committest
* [svn-r23989] Snapshot version 1.9 release 161HDF Tester2013-08-111-1/+1
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* [svn-r23968] Snapshot version 1.9 release 160HDF Tester2013-08-041-1/+1
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* [svn-r23926] Snapshot version 1.9 release 159HDF Tester2013-07-211-1/+1
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