| Commit message (Collapse) | Author | Age | Files | Lines |
... | |
| | | |
|
| | | |
|
| | | |
|
| | | |
|
| | | |
|
| | | |
|
| | |
| | |
| | |
| | | |
--enable-fortran
|
| |/
| |
| |
| | |
definitions
|
|\ \
| |/
| |
| | |
Tested on 64-bit linux VM w/ C++ and Fortran 2003
|
| |
| |
| |
| |
| |
| |
| |
| | |
redundant /usr/include and lib in fcompile and link flags checks, now that I have run reconfigure.
Also changed paths to h5cc, etc. in scripts to run installed examples from relative paths to absolute paths.
Tested with h5committest.
|
| |
| |
| |
| |
| |
| |
| | |
Remove CXX_CONDITIONAL
remove unneeded/obsolete sections.
h5commtitest
|
| |
| |
| |
| | |
Tested: local linux
|
| | |
|
|\ \
| |/
| |
| | |
Tested w/ h5committest
|
| |
| |
| |
| |
| |
| | |
HDF5-237
tested: h5committest
|
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| | |
features/autotools_rework
branch.
Removed the configure option that allows selective disabling of individual
internal filters (fletcher32, shuffle, etc.).
This feature mucked up the code with a lot of #ifdefs, saved very little space,
and was not scalable to a general scheme for library size reduction. We've
decided to remove the feature while we investigate a more general scheme for
decreasing the library size.
Part of: HDFFV-9086
Tested on: h5committest
|
| |
| |
| |
| | |
make clean.
|
|\ \
| |/
| |
| |
| | |
Tested on: jam - serial: C++/Fortran
parallel: Fortran
|
| | |
|
| |
| |
| |
| | |
HDFFV-9089, HDFFV-9091, HDFFV-9092, HDFFV-9094, HDFFV-9095
|
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| | |
autotools_rework branch:
- Remove Infering parallel compilers (C and Fortran) from configure.ac
- Remove restriction to build shared with parallel
- Cleanup parallel sections in configure.ac
- remove large file support checks
- MPE fixes.
tested with h5committest.
|
| |
| |
| |
| |
| |
| | |
libraries
added hdf5.h to hdf5_hl.h
|
| |
| |
| |
| |
| |
| |
| |
| |
| | |
Developers will now have to run bin/reconfigure (deprecated, will be removed
soon) or autogen.sh after checking out code.
Part of: HDFFV-9120
Tested on: jam with Fortran and C++
|
| |
| |
| |
| |
| |
| |
| |
| |
| |
| | |
n-bit
at compile time.
Fixes HDFFV-9086
Tested on: jam, both serial and parallel w/ fortran & C++
|
|/
|
|
|
|
|
|
|
|
|
|
| |
Change AC_TRY_RUN TO AC_TRY_COMPILE
Changed all the instances of AC_TRY_RUN for the Fortran and C++ tests to use
AC_COMPILE_IFELSE and moved all the tests to new files in m4 directory:
aclocal_cxx.m4 (for C++ tests)
aclocal_fc.m4 (for Fortran tests)
tested: jam
|
|
|
|
|
| |
MPI_File_set_size as they are supported by most MPI implementations.
- fix bug in t_mpi.c (HDFFV-8856)
|
|
|
|
|
|
|
|
|
|
|
| |
back fix for removing rpaths from l
ib files. The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath co
nfigure option was invoked.
Added instead configure variable hardcode_into_lib=no. This removes rpath from lib files on Linux
and solaris machines.
Tested with h5committest on jam, koala, ostrich and platypus (cmake), and with configure option --disable-sharedlib-rpath on emu, platypus and quail.
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
configure summary.
For make installcheck, compile and run installed examples using the installed scripts. They were being compiled but not run.
Add Fortran2003 examples to the run-ex-fortran script when fortran2003 is enabled.
Set flag to -O3 in production mode for Intel compilers other than those with specified other settings.
Gentoo patches:
Remove unnecessary setting of LD_LIBRARY_PATH from configure.
Prevent potential array subscript out of bounds error in perform/pio_engine.c and sio_engine.c.
Tested with h5committest on jam, koala, ostrich and platypus, on emu and kite, and parallel tests on jam, koala and platypus with mpich built with gnu 4.8.2 and with intel compilers.
|
|
|
|
|
|
| |
Remove WIN32 AND NOT CYGWIN if blocks - should be just WIN32
Tested: local linux CMake
|
|
|
|
|
|
| |
instead of INCLUDES. Update automake to 1.14.1
h5committest
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Remove all traces of MPI-POSIX VFD and GPFS detection/code.
Remove remaining traces of stream VFD.
Remove testpar/t_posix_compliant test (it's not actually verifying anything).
Clean up H5D__mpio_opt_possible() further.
Moved environment variable that disables MPI collective operations into
MPI-IO VFD (instead of it being in src/H5S.c).
A few other small code cleanups.
Tested on:
Mac OSX/64 10.9.2 (amazon) w/parallel & serial
|
| |
|
|
|
|
| |
KitWare recommendations: Change CMake commands to lower case.
|
|
|
|
|
|
|
| |
KitWare recommendations: Change CMake commands to lower case.
Remove INCLUDE_DIRECTORIES in src for target level includes.
Change ADD_DEFINITIONS package debug defines into CMake option.
Remove -DNDEBUG
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Revert some earlier usage of strncpy, which was incorrect.
Bring Coverity changes from branch back to trunk:
r20821:
Use HDstrncpy. --gh
(Fixed already, with strdup)
r20822:
(Not merged, incorrect use of HDstrncpy())
r20823:
(Not merged, incorrect use of HDstrncpy())
r20824:
Maintenance: Bug fix: addressed CID 666.
Value stored at *expression_len should be used in the call to
HD5packFstring to avoid overflow (and unnecessary arithmetic
calculation and casting)
r20825:
Issue 642: Added check for error and handler with print to stderr and exit.
r20826:
Undo revision 20818, as that issue has already been fixed in the 1.8 branch
and trunk (but not coverity branch)
r20827:
(Not merged, incorrect use of HDstrncpy())
r20828:
Use HDstrncpy. --gh
(Corrected use of strncpy())
r20829:
Check return of H5Lget_val(print_udata->fid, path, targbuf,
linfo->u.val_size + 1, H5P_DEFAULT) and if error set trgbuf[0] to 0.
Check if H5Lunpack_elink_val(targbuf, linfo->u.val_size, NULL,
&filename, &objname) was successful and allow print. Otherwise filename
and objname are not created. (init those to NULL)
r20830:
resolved coverity issues 939, 940, 941, 944, and 947.
all were complaints about use of sprintf, and in all cases, the
buffers used were large enough for all eventualities.
Resolved issue by replacing calls to sprintf with calls
to snprintf.
r20831:
Maintenance: Addressed CID 852
Replaced sprintf with snprintf
r20832:
Purpose: Fix valgrind issues with hl/examples/ex_image2
Description:
Modified hl/examples/ex_image2 to free global "gbuf" before exit.
Tested on:
Mac OSX/64 10.9.1 (amaon) w/C++, FORTRAN & Threadsafety
(too minor to require h5committest)
|
|
|
|
|
|
| |
cleaned. CMake update to clean testfiles.
Tested: local cmake, autools, and h5committest
|
|
|
|
|
|
| |
--disable-sharedlib-rpath configure option is invoked. Fix for HDFFV-8276.
Tested with h5committest and on hdf-duck.
|
|
|
|
|
|
| |
developers.
Tested: local linux
|
|
|
|
| |
Tested:" local linux
|
|
|
|
| |
This adds the UserMacros.cmake support needed.
|
|
|
|
|
|
| |
Change configure to test the result of the CHECK HEADERS call before checking for the library.
Tested: local linux, h5committest
|
| |
|
|
|
|
|
|
| |
FIX: Removed files and adjusted other files accordingly.
Tested: jam (gnu)
|
|
|
|
| |
Tested with h5committest on jam, koala and ostrich.
|
|
|
|
|
|
| |
if configured with --disable-static the default for HDF5_USE_SHLIB in the compile scripts will be changed to yes. This is a fix for HDFFV-8141, where the compile scripts try to link to non-existant static hdf5 libraries.
Tested on jam,koala,ostrich(h5committest) and other THG machines.
|
| |
|
|
|
|
|
|
| |
autotools TESTS var, rename configure.in to configure.ac, convert test scripts from hard *.sh to configure managed *sh.in files.
Tested: h5committest
|
|
|
|
|
|
| |
libtool 2.4.2
Tested THG machines.
|
|
|
|
| |
Text file only, but tested with h5committest.
|
|
|
|
| |
non-executable files.
|