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* Initial updates hdf5 1 8 23 (#2420)Larry Knox2023-01-291-7/+7
| | | | | | | | | | | | * Initial updates for HDF5 1.8.23 release Update so numbers for release Set version to 1.8.23 Switch default build mode to production for release in configure.ac Set HDF5_GENERATE_HEADERS to OFF in src/CMakeLists.txt Commit Makefile.ins and other generated files for release except ...~ files and autom4te.cache. * Update platforms tested.
* 1.8 Correct requires setting for pkgconfig files #2280 (#2285)Allen Byrne2022-12-121-2/+2
| | | | | * Correct requires setting for pkgconfig files #2280 * Change macos for CI
* 1.8 Merge #2175 Implement option for using CMake GNUInstallDirs (#2224)Allen Byrne2022-11-081-3/+3
| | | | | * Merge #2175 Implement option for using CMake GNUInstallDirs * 1.8 only revert mod dir because of windows
* Run bin/reconfigure to propagate fortran mod change to configure and (#1952)Larry Knox2022-07-294-4/+9
| | | Makefile.in files.
* 1.8 fortran module folder from GH#1411 #1922 (#1944)Allen Byrne2022-07-282-9/+10
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* clang 13 format #1933 (#1941)Allen Byrne2022-07-284-65/+65
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* Add missing files for enabling doxygen and run bin/reconfigure. (#1246)Larry Knox2021-12-024-8/+196
| | | | | | * Add missing files for enabling doxygen and run bin/reconfigure. * Make default to build high-level tools the same as default for high-level library.
* 1.8 Merge HDFFV-11266 - add option to build HL tools #1018 (#1022)Allen Byrne2021-09-174-0/+4
| | | | | | | * Merge HDFFV-11266 - add option to build HL tools #1018 * Update configure and Makefile.ins with bin/reconfigure. Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
* 1 8 update copyright headers (#1004)Larry Knox2021-09-161-1/+1
| | | | | | | | | | | | | | | * Update copyright headers with reproduction notice in 5 files (#993) * Update copyright headers with reproduction notice in 5 files that did not match terms in COPYING file . * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Commit changes to Makefile.ins and 4 src/H5E*.h files from running bin/reconfigure. Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Hdf5 1 8 merges from develop and format specifier updates (#670)Allen Byrne2021-05-251-3/+7
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Update supported platforms * Merge PR#3 changes from develop * # WARNING: head commit changed in the meantime Merge gcc 10 diagnostics option from develop Merge CMake changes from develop Merge warnings from develop Merge #318 OSX changes from develop Merge tools changes from develop Merge test macros from develop * Format updates * Fix missing semicolon and format fix * Format update * Correct actions, remove java option * Update autotools build files * Add testfiles * Fix configure issue with make flags * Init fapls to default * Update generated files and fix h5repack id closure * update format * Merges from develop #358 patches from vtk #361 fix header guard spelling * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings header guard underscore cleanup whitespace cleanup tools sync * format alignment * initialize vars * revert H5private change * Merge #380 from develop * Split format source and commit changes on repo push * Change windows TS to use older VS. * HDFFV-11229 merge dev changes for long double display in tools * Committing clang-format changes * Update unsupported types with precision * Add "option" command for clang options * CMake merges from develop h5cc scripts * Updates from develop and printf formatters * Committing clang-format changes * Issue #669 remove version from pkgcfg filename * remove version from h5cc script Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* 18 copying update (#565)Larry Knox2021-04-221-13/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * close #195. (#196) * Update HDF5PluginMacros.cmake * Update HDF5PluginMacros.cmake * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add script bin/switch_maint_mode. Add file changes generated by bin reconfigure in src/H5Edefin.h src/H5Einit.h src/H5Epubgen.h src/H5Eterm.h * Update MANIFEST for switch_maint_mode. * Update so numbers to match 1.8.22 release. * Updated configure with reconfigure. * Updates and corrections following HDF5 1.8.22 release. * Commit Makefile.ins with so version numbers updated by bin/reconfigure. * Fix undefined left shifting of negative numbers (#338) Undefined Bahavior Sanitizer errored here about left shifting negative numbers. * Update top-level COPYING file and remove COPYING files from subdirectories. * Update top-level COPYING file and remove COPYING files from subdirectories (#561) * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING (license) file. * Add release_docs/code-conventions.md file. * Add script to test h5py. * Fix script error. * Add file h5pytest.yml. * Test declaration of counter variables in for loops. * Committing clang-format changes * Committing clang-format changes * Added [] to line 126 of H5LTanalyze.l. Ran bin/genparser with flex v2.6.4 and Bison v3.0.4 on jelly. * Revert "Added [] to line 126 of H5LTanalyze.l." This reverts commit e4a9cee441efa75b16a8ee030c86189e186dd266. * Revert extra commits to match canonical develop. * Update top-level COPYING file and remove COPYING files from subdirectories. * Remove subdirectory COPYING files from MANIFEST. Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Remove non-existant file from MANIFEST. Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org> Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Sean McBride <sean@rogue-research.com> Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* 1 8 Merges from develop (#418)Allen Byrne2021-03-032-5/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Update supported platforms * Merge PR#3 changes from develop * # WARNING: head commit changed in the meantime Merge gcc 10 diagnostics option from develop Merge CMake changes from develop Merge warnings from develop Merge #318 OSX changes from develop Merge tools changes from develop Merge test macros from develop * Format updates * Fix missing semicolon and format fix * Format update * Correct actions, remove java option * Update autotools build files * Add testfiles * Fix configure issue with make flags * Init fapls to default * Update generated files and fix h5repack id closure * update format * Merges from develop #358 patches from vtk #361 fix header guard spelling
* HDF5 1 8 merge of recent changes and tools (#353)Allen Byrne2021-02-225-77/+73
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Update supported platforms * Merge PR#3 changes from develop * # WARNING: head commit changed in the meantime Merge gcc 10 diagnostics option from develop Merge CMake changes from develop Merge warnings from develop Merge #318 OSX changes from develop Merge tools changes from develop Merge test macros from develop * Format updates * Fix missing semicolon and format fix * Format update * Correct actions, remove java option * Update autotools build files * Add testfiles * Fix configure issue with make flags * Init fapls to default * Update generated files and fix h5repack id closure * update format
* Hdf5 1 8 (#328)Larry Knox2021-02-092-7/+30
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * close #195. (#196) * Update HDF5PluginMacros.cmake * Update HDF5PluginMacros.cmake * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add script bin/switch_maint_mode. Add file changes generated by bin reconfigure in src/H5Edefin.h src/H5Einit.h src/H5Epubgen.h src/H5Eterm.h * Update MANIFEST for switch_maint_mode. * Update so numbers to match 1.8.22 release. * Updated configure with reconfigure. * Updates and corrections following HDF5 1.8.22 release. * Commit Makefile.ins with so version numbers updated by bin/reconfigure. Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org> Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
* Update pkgconfig settings with version - #218 (#223)Allen Byrne2020-12-221-2/+2
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* Update SO numbers in Hdf5 1 8 (#216)Larry Knox2020-12-211-9/+9
| | | | | | | | | | | | | | | | | | | | | | | | | | | | * close #195. (#196) * Update HDF5PluginMacros.cmake * Update HDF5PluginMacros.cmake * Restores maintainer mode in the autotools (#200) Maintainer mode should be enabled in development branches. Also adds helpful commenting. Add script bin/switch_maint_mode. Add file changes generated by bin reconfigure in src/H5Edefin.h src/H5Einit.h src/H5Epubgen.h src/H5Eterm.h * Update MANIFEST for switch_maint_mode. * Update so numbers to match 1.8.22 release. Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org> Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
* HDF5 1 8 fix fortran build on macs (#186)Allen Byrne2020-12-161-2/+2
| | | | | * Correct fortran and shared libs option * Fix for no shared fortran build
* 1.8 has extra fortran CMake option (#176)Allen Byrne2020-12-151-1/+1
| | | | | * 1.8 has extra fortran CMake option * Update license URL
* OESS-98 Update plugin build option (#171)Allen Byrne2020-12-151-0/+48
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* Update HDF5 1.8 copyright headers with updated copyright URL (#148)Larry Knox2020-12-0429-139/+139
| | | | | | | * Update URL for COPYING file in copyright headers. * Make fortran copyright headers uniformly spaced. * Update url for Copyright file in c++/src/footer.html.
* Multiple changes to bring branch up-to-date (#87)Allen Byrne2020-11-201-2/+2
| | | | | Correct TARGET variable and CMake config file location. Add option to allow filter plugins to be built inline. Update CMake tools macros.
* Source formattedAllen Byrne2020-10-017-4418/+2807
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* Merge clang-format changes from developAllen Byrne2020-10-011-1/+12
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* Merge from 1.10-1.12-dev - LT parse needs updateAllen Byrne2020-07-201-1/+20
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* Update configure and Makefile.ins after bin/reconfigure.Larry Knox2020-06-224-4/+8
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* Fix ifort warning flag.Larry Knox2020-05-044-0/+12
| | | | | | | | Restore AC_DEFUN([PAC_PROG_FC_DEFAULT_REALisDBLE] in m4/aclocal_fc.m4. Add --enable-symbols, --enable-profiling, and --enable-optimization options to autotools configure; all configure flags for --enable-production and --disable-production should match HDF5 1.10 and 1.12 production and debug default flags.
* Update to use optimization flags, C++ error flags, and correctLarry Knox2020-04-304-0/+8
| | | | libhdf5.settings.in to remove unworkable changes.
* TRILAB-192 - merge changes from developAllen Byrne2020-04-073-85/+35
| | | | Single source, config files, for warnings for both autotools and CMake. Update CMake libraries, tools, tests to use correct flags.
* Autotools reconfigure updateAllen Byrne2020-03-314-6/+14
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* TRILAB-192 merging warnings changes from developAllen Byrne2020-03-312-4/+4
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* Merge changes from other branchesAllen Byrne2020-02-294-4/+4
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* HDFFV-11012, sanitize, warnings and tools idsAllen Byrne2020-02-112-4/+4
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* Merfge changes to CMake test options and add sanitizersAllen Byrne2020-01-202-2/+4
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* Ran bin/reconfigurebyrn2019-10-074-0/+12
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* Add changes to Makefile.in files and four H5e*.h files from running ↵Larry Knox2019-08-284-16/+20
| | | | bin/reconfigur.
* Fix fortran SHARED issues from mergeAllen Byrne2019-08-072-17/+17
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* Merge of HDFFV-10845, 10529 from developAllen Byrne2019-07-275-173/+158
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* Reconfigured autoconf filesdpopat2019-07-194-1/+11
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* Added options to build tools and tests for HDF5_ 1_8Dhvanil Popat2019-07-161-1/+7
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* Add tabs for entire block in Makefile.Larry Knox2019-05-112-16/+16
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* Makefile needed tab instead of spaces.Larry Knox2019-05-112-2/+2
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* Add links to lib files from hl/fortran with names that match those ofLarry Knox2019-05-092-4/+34
| | | | | the other hl libs; e.g. libhdf5_hl_fortran.so -> libhdf5hl_fortran.so. Fix for HDFFV-10596.
* Merge in CMake changes from developAllen Byrne2019-04-041-2/+2
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* Add missing SKIP_HDF5_FORTRAN_SHARED to all fortran cmakeAllen Byrne2018-11-013-4/+4
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* Remove invalid file referenceAllen Byrne2018-10-301-4/+1
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* Merge CMake changes from 1.10 to 1.8Allen Byrne2018-10-026-170/+238
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* HDFFV-10444 fix so numbersAllen Byrne2018-04-101-4/+4
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* Change CMake min to 3.10Allen Byrne2018-03-094-4/+4
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* HDFFV-10398 Merge from developAllen Byrne2018-02-011-3/+3
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* HDFFV-10392,10393,01385 merge from developAllen Byrne2018-01-223-17/+9
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