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* [svn-r21124] Issue 2763 - adding OAPL_ID as a new parameter to ↵Raymond Lu2011-07-191-5/+5
| | | | | | | | | H5Rdereference. A followup commit for r21117. I made 2 changes: 1. Quincey changed H5P_DATASET_ACCESS_DEFAULT to H5P_DEFAULT for the tests that call H5Rdereference. Inside H5R_dereference, I assigned H5P_DATASET_ACCESS_DEFAULT to OAPL_ID if it is H5P_DEFAULT. 2. I added the test for invalid OAPL_ID in trefer.c. Tested on jam, koala, heiwa.
* [svn-r21121] Description:Quincey Koziol2011-07-182-3/+3
| | | | | | | | | Switch from H5P_DATASET_ACCESS_DEFAULT to H5P_DEFAULT for calls to H5Rdereference2(). Tested on: Mac OS X/32 10.6.8 (amazon) w/debug (too minor to require h5committest)
* [svn-r21117] Issue 2763 - I added a new parameter of object access property ↵Raymond Lu2011-07-182-8/+8
| | | | | | list to the function H5Rdereference. It's called H5Rdereference2 now. H5Rdereference function has been deprecated to H5Rdereference1. I also added some test cases in trefer.c. Tested on jam, heiwa, and koala.
* [svn-r21080] Remove redundant EXPORTS symbol since CMake automatically ↵Allen Byrne2011-07-081-1/+0
| | | | creates it.
* [svn-r21033] Snapshot version 1.9 release 84HDF Tester2011-06-261-1/+1
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* [svn-r21000] Snapshot version 1.9 release 83HDF Tester2011-06-191-1/+1
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* [svn-r20922] Snapshot version 1.9 release 82HDF Tester2011-05-291-1/+1
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* [svn-r20901] Remove if() that avoided a copy of the last element to itself. ↵Allen Byrne2011-05-251-4/+2
| | | | | | | | This was to solve an issue of a difference between 1.8 and trunk. 1.8 used the wrong variable in the if() and upon reflection the if() was determined to be unnecessary and complicated the logic. 1.8 tests would have treated the if() as always true with the result being the same as though the if() was absent. This change reflects that equivalance and will avoid a potential problem in 1.8. Tested: local linux, reviewed by two developers
* [svn-r20890] Snapshot version 1.9 release 82HDF Tester2011-05-231-1/+1
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* [svn-r20870] Description: Fixed HDFFV-7605: Dim Scales APIs- error when ↵Scot Breitenfeld2011-05-201-1/+1
| | | | | | | | unattaching dim. sacles * Fixed Loop counter when removing object in dimension set with more then one scale. Tested: jam (intel and gnu)
* [svn-r20504] Purpose:Mike McGreevy2011-04-142-2/+14
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | General shared library improvements for CYGWIN / AIX Description: Shared libraries are disabled on both CYGWIN and AIX due to inability to build them correctly. Part of the problem in both of these situations is the lack of the libtool flag -no-undefined, which tells libtool that all needed symbols are defined at link time (a requirement on these systems) and that it's okay to build shared libraries. Another problem are lack of dependencies between wrapper libraries and core C HDF5 library. This patch addresses both of these by fixing configure to add in -no-undefined flag for libtool during linking and adds automake dependencies in the Makefile.am files. After testing, both CYGWIN and AIX now generate shared libraries, but there are still some test failures in each. (cache_api, dt_arith, and testerror.sh on CYGWIN, and fortran tests on AIX). Even though the shared libraries are not quite perfect, this is a general improvement to what we had before, so I'm applying the patch anyways. Note that default behavior of shared libraries on these systems being disabled has NOT been changed and requires the use of the --enable-unsupported to attempt to build them. We will need to address the test failures in each architecture prior to formally supporting shared libraries on each. Tested: h5committested & CYGWIN tested (on bangan) (AIX tested by Albert on bp-login2)
* [svn-r20502] Purpose:Mike McGreevy2011-04-141-14/+34
| | | | | | | | | | | | | | | | | | | | | | | | Add "silent make" mode configure option. Description: Automake 1.11 has a new option available that allows for a silent make mode. This functionality needs to be explicitly enabled in configure.in via the use of the automake macro AM_SILENT_RULES, which is what this commit is adding. This introduces a new configure option: --{en|dis}able-silent-rules This option is on by default, and simplies compile and link line outputs when building the library. Disabling this option will print full "verbose" output (i.e., full compile and linking lines for each target). Tested: This was tested on jam & h5committested
* [svn-r20475] Purpose:Mike McGreevy2011-04-111-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - Revise shared Fortran library disabling scenarios in configure - Improve configure output summary Description: Shared Fortran libraries are not supported on Mac, but were being disabled by configure in a way that also forced the C libraries to be static-only. This has been fixed, so now only shared Fortran is disabled while shared C can remain. This prompted two additional changes: 1. While working on the check that addresses whether or not shared Fortran libraries are allowed, removed old and no longer needed check(s) that disable shared Fortran libraries with HP, Intel 8, PGI, and Absoft compilers. (Essentially, Mac is the only situation in which Fortran shared are disabled by configure.) 2. Having two different states of libraries (i.e. shared C library with static-only Fortran library) was not apparent in the configure summary, which labeled all libraries as either shared and/or static. I've added lines to both the C++ and Fortran output sections to list shared/static-ness of these libraries specifically. Additionally, I've made sure that the new --enable-unsupported configure option correctly overrides configure if it tries to disable a shared library. Tested: jam, fred, & h5committest
* [svn-r20405] Description:Quincey Koziol2011-04-041-1/+1
| | | | Bump patch release number, after giving out private snapshots.
* [svn-r20061] Description:Quincey Koziol2011-02-081-164/+102
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring changes from Coverity branch to trunk: r19930: Fix memory leaks involving VL attributes in h5repack and h5diff. The buffers in copy_attr and diff_attr were not checked for the presence of a vlen before being freed, and vlen storage was never reclaimed. Added checks and calls to H5D_vlen_reclaim(). r19933: Purpose: Fix memory leak in H5L_move_cb() Description: H5L_move_cb copied the source link using H5O_msg_copy() but freed it manually using H5MM_xfree(). Since H5O_link_copy allocates the link using H5FL_MALLOC, this causes the link to be allocated from the free list but is never put back on the free list when it is freed. This prevents the link free list from shutting down properly. Modified H5L_move_cb() and H5L_move_dest_cb() to free the link properly using H5O_msg_free(). r19973: Fix resource leaks by freeing string created by HD5f2string r19974: Issue #345: Inialize buf variable to null Tested on: Mac OS X/32 10.6.6 (amazon) w/debug & production (h5committested on Coverity branch)
* [svn-r19839] Updated to libtool v 2.4, autoconf 2.68 and m4-1.4.15.Larry Knox2010-11-231-0/+3
| | | | Tested with h5committest on amani, heiwa, and jam.
* [svn-r19740] Snapshot version 1.9 release 79HDF Tester2010-11-071-1/+1
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* [svn-r19701] Snapshot version 1.9 release 78HDF Tester2010-10-311-1/+1
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* [svn-r19666] Snapshot version 1.9 release 77HDF Tester2010-10-241-1/+1
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* [svn-r19569] Snapshot version 1.9 release 76HDF Tester2010-10-101-1/+1
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* [svn-r19512] Snapshot version 1.9 release 75HDF Tester2010-10-051-1/+1
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* [svn-r19506] Bring changes from revisions 19408, 19421, and 19442 from ↵Larry Knox2010-10-041-5/+15
| | | | | | branches/hdf5_1_8 to trunk. These revisions reorganize the compile scripts using h5cc.in, h5fc.in, and h5c++.in, add checks for installed examples to the scripts that run them after installation, and add DESTDIR for install as needed for RPMs. Tested on amani, heiwa and jam by h5committest and with CYGWIN.
* [svn-r19434] Correct use of lib, include, bin in INSTALL commands to use ↵Allen Byrne2010-09-201-4/+4
| | | | | | proper variables. Tested: local linux
* [svn-r19366] Updated autoconf to version 2.6.7, libtool to version 2.2.10, ↵Larry Knox2010-09-101-1/+1
| | | | | | and m4 to version 1.4.14. Also added m4 directory for m4 macros according to autoconf suggestion. Tested with h5committest on amani, jam, and heiwa, and on linew.
* [svn-r19336] Change #ifndef _WIN32 to #ifdef H5_HAVE_UNISTD_HAllen Byrne2010-09-011-3/+3
| | | | Tested: windows and local linux
* [svn-r19325] Added parallel build commands.Allen Byrne2010-08-311-1/+1
| | | | | | | Corrected use/name of source folder aliases. Duplicated FindMPI.cmake so that non-c++ compiler is found first (recommemded commands did not work). Tested: local linux with mpich
* [svn-r19086] Snapshot version 1.9 release 74HDF Tester2010-07-181-1/+1
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* [svn-r19064] Snapshot version 1.9 release 73HDF Tester2010-07-111-1/+1
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* [svn-r19059] Brought changes from hdf5_1_8 to add version information for ↵Larry Knox2010-07-091-0/+2
| | | | | | fortran and c++ compilers in libhdf5.settings file and configure output (r18836), to install examples as part of make install (r18680), and to provide scripts to compile and run the examples after they are installed (r18817). Tested with new/h5committest on amani, heiwa, and jam.
* [svn-r19047] Snapshot version 1.9 release 72HDF Tester2010-07-041-1/+1
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* [svn-r19031] Snapshot version 1.9 release 71HDF Tester2010-06-281-1/+1
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* [svn-r19022] Snapshot version 1.9 release 70HDF Tester2010-06-201-1/+1
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* [svn-r18882] Maintenance: fixed a typo in email addressElena Pourmal2010-05-221-1/+1
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* [svn-r18880] Bug fix: Elena Pourmal2010-05-222-44/+56
| | | | | | | | Fixed a bug (1855) in H5DSattach_scale, H5DSis_attached and H5DSdetach_scale caused by using H5Tget_native_type function to determine the native type for reading REFERENCE_LIST attribute. The bug was exposed on Mac PPC. Platforms tested: juniper (Mac PPC), jam, amani, linew
* [svn-r18856] Added CPack commands for installtion programAllen Byrne2010-05-191-3/+5
| | | | Tested: local linux and Windows
* [svn-r18823] Snapshot version 1.9 release 69HDF Tester2010-05-161-1/+1
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* [svn-r18818] Bug fix: Elena Pourmal2010-05-151-112/+94
| | | | | | | | | | | Fixed a bug in the H5DSdetach_scale function when 0 bytes were allocated after the last reference to a dim. scale was removed from the list of references in a VL element of the DIMENSION_LIST attribute; modified the function to comply with the Spec: DIMENSION_LIST attribute is deleted now when no dimension scales left attached. Platforms tested: jam with electric fence, amani amd linew
* [svn-r18793] Add files to support building library with CMakeAllen Byrne2010-05-131-0/+65
| | | | Tested: Local linux
* [svn-r18709] Purpose:Mike McGreevy2010-05-051-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | Improve configure's large-file support control. Description: Modified configure to now attempt to add defines necessary for supporting largefiles on all systems, instead of solely on linux. This is in response to user requests to enable largefile support on Solaris by default, as well as to give extra control on AIX (instead of just jamming the necessary flag into the config files). The old --enable-linux-lfs flag has been removed in favor of the --enable-largefile flag (enabled by default), which can be used on all platforms. On systems where large files cannot be supported in this manner, configure will report as such. Tested: h5committest AIX (NCSA's blue_print machine) duty, liberty, and linew.
* [svn-r18684] Snapshot version 1.9 release 68HDF Tester2010-05-021-1/+1
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* [svn-r18589] Snapshot version 1.9 release 67HDF Tester2010-04-181-1/+1
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* [svn-r18579] Purpose:Mike McGreevy2010-04-151-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Autotool Upgrade / Libtool Bug Fix Description: Updated autotools referenced in bin/reconfigure as follows: Autoconf 2.64 --> Autoconf 2.65 Automake 1.11 --> Automake 1.11.1 Libtool 2.2.6a --> Libtool 2.2.6b-mcg The referenced libtool version is a custom version of 2.2.6b. It has been tweaked to fix a bug in libtool that occurs when using PGI 10.0 compilers. A check incorrectly categorizes the C++ compiler as version 1.0 instead of 10.0, and the link line is subsequently set up incorrectly and fails to compile. A patch has been made available and will be included in the next release of libtool, but in the meantime I've applied the patch to a custom installation as indicated above. This bin/reconfigure now references the custom installation, and the resulting configure script will correctly categorize the PGI 10.0 C++ compiler. Ran bin/reconfigure to regenerate configure and makefiles. Tested: jam and amani with PGI 10.0 compilers. h5committest
* [svn-r18545] Snapshot version 1.9 release 66HDF Tester2010-04-111-1/+1
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* [svn-r18508] Snapshot version 1.9 release 65HDF Tester2010-04-041-1/+1
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* [svn-r18465] Snapshot version 1.9 release 64HDF Tester2010-03-281-1/+1
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* [svn-r18432] Snapshot version 1.9 release 63HDF Tester2010-03-211-1/+1
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* [svn-r18406] Snapshot version 1.9 release 62HDF Tester2010-03-141-1/+1
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* [svn-r18350] Snapshot version 1.9 release 61HDF Tester2010-02-281-1/+1
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* [svn-r18217] Snapshot version 1.9 release 60HDF Tester2010-02-071-1/+1
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* [svn-r18199] Snapshot version 1.9 release 59HDF Tester2010-01-311-1/+1
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