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* Update copyright headers (#2184)Larry Knox2022-11-011-1/+0
| | | | | * Updated source file copyright headers to remove "Copyright by the Board of Trustees of the University of Illinois", which is kept in the top-level COPYING file.
* Develop clang 13 format (#1933)Allen Byrne2022-07-261-1/+1
| | | | | * Update format source to clang 13 * More format changes
* various cleanup java test, test files, comments (#1363)Allen Byrne2022-01-181-1/+1
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* More clang tidy (#908)Sean McBride2021-08-231-4/+4
| | | | | | | | | | | | | | | | | | | * Pacify clang-analyzer-unix.cstring.NullArg * Apply some bugprone-suspicious-string-compare * Apply some readability-simplify-boolean-expr * Apply some readability-make-member-function-const * Apple some bugprone-macro-parentheses * Changed an f suffix to L for `long double` * Applied some readability-uppercase-literal-suffix automatically * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* OESS-168:Remove clang warnings. (#835)H. Joe Lee2021-07-261-4/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | * OESS-168:Remove implicit conversion increases floating-point precision warnings. * OESS-168:Remove clang warnings. * OESS-168:Remove clang warnings. * Committing clang-format changes * OESS-168:Remove clang warnings. * Committing clang-format changes * OESS-168:Remove clang warning. * OESS-168:Remove clang warnings. * OESS-168:Address @byrnHDF review. * Remove line added to generated hl/src/H5LTanalyze.c file. Issue #854 created for creating a fix. * Remove extra whitespace from H5LTanalyze.c. * Remove extra blank line. Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
* Update license url part2 (#333)Larry Knox2021-02-171-1/+1
| | | | | | * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING file - files not in src or test.
* Clang-format of source filesAllen Byrne2020-09-301-380/+396
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* Removes staff email addresses from the repositoryDana Robinson2020-08-071-2/+0
| | | | Removes redundant C library headers from hl library
* Update HD prefix and reconcile hl/cpp testAllen Byrne2019-08-161-15/+15
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* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* Miscellaneous code cleanup.Binh-Minh Ribler2016-10-211-4/+2
| | | | | | Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test)
* Description:Binh-Minh Ribler2016-10-201-18/+30
| | | | | | | | | | | | - Removed calls to H5Tget_native_type in the PT code. The application would need to do that if desired. - Added Abhi's program to tests to verify the fix. - This fix might have fixed HDFFV-9927, HDFFV-9042, and the issue reported by Barbara Jones from Ametek as well. Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* [svn-r29269] Purpose: Improve Packet Table libraryBinh-Minh Ribler2016-03-041-350/+170
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: The Packet Table API used to have fixed-length and variable-length functions (i.e., H5PTcreate_fl and H5PTcreate_vl), but in 2006, the vlen functions were ifdef'ed out with VLPT_REMOVED, see HDFFV-442. The majority of this revision includes removing unused vlen stuff, adding various vlen tests, initial code cleanup, and first pass of commenting. Details: - Removed the VLPT_REMOVED ifdef, but keep H5PTis_varlen and the free function because they are useful or even needed, but the free function's name is changed to be more appropriate for both read/write buffers, i.e., H5PTfree_vlen_buff. - The new test file, test_packet_vlen.c, contains tests showing packet tables, containing various types of vlen data, can be created with the fixed-length function - Two accessor functions were added per HDFFV-8623/patch 003. /* Returns the ID of the dataset associated with the packet table */ hid_t H5PTget_dataset(hid_t table_id); /* Returns the ID of the datatype the packet table uses */ hid_t H5PTget_type(hid_t table_id); - Various cleanup: replacing 0/-1 with SUCCEED/FAIL and H5I_BADID with H5I_INVALID_HID, and removing many warnings. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r27204] Description:Quincey Koziol2015-06-151-2/+2
| | | | | | | | | Clean up compiler warnings before merging in v3 metadata cache changes from branch. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel
* [svn-r26417] Removed compiler warnings from HL. HDF5-237Scot Breitenfeld2015-03-101-2/+2
| | | | Tested: h5committest
* [svn-r26333] Eliminates gcc warnings due to -Wunsuffixed-float-constants.Dana Robinson2015-03-011-8/+8
| | | | | | | | | | | | - Adds 'F' suffixes for most float constants. - A few constants MUST be of type double. These now receive the long double L suffix and are then cast to double. I do this via a new H5_DOUBLE() macro which was added to H5private.h. Fixes: HDFFV-9148 Tested on: h5committest
* [svn-r26321] Fix for HDFFV-9042.Scot Breitenfeld2015-02-261-0/+87
| | | | tested: h5commit
* [svn-r22024] Add HD prefix to tools library based tests. Cleaned ↵Allen Byrne2012-03-051-7/+7
| | | | | | allocation/free in tests. Tested: local linux/ changes h5committetest against 1.8 version
* [svn-r19654] Description:Quincey Koziol2010-10-211-3/+6
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring Coverity revisions from branch back to trunk, and clean up some other misc. compiler warnings also. r19500: Fix coverity items 1446 and 1447. Moved up calls to memset in test_cont in ohdr.c so the test never tries to close uninitialized locations. r19501: Fix coverity items 1398-1445. Various uninitialized variable errors in fheap.c. r19502: Fixed coverity issue 579 and some additional warnings in the file as well. r19503: Bug fix: This fix addressed the "RESOURCE_LEAK" problems #789 and 790, run 26 r19504: minor mods to try to keep coverity from flagging false positives. r19505: Fixed coverity issues 566 - 571. Declared variables that are passed to functions that use them as arrays to be arrays of size 1. Tested on: Mac OS X/32 10.6.4 (amazon) w/debug, production & parallel (h5committested on trunk)
* [svn-r15628] Description:Quincey Koziol2008-09-161-3/+3
| | | | | | | | | | | | | Remove trailing whitespace from C/C++ source files, with the following script: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Tested on: Mac OS X/32 10.5.5 (amazon) No need for h5committest, just whitespace changes...
* [svn-r14208] Description:Quincey Koziol2007-10-181-12/+2
| | | | | | | | | | | | | | | | | | | | Make H5Pget_filter_by_id() API versioned and switch internal usage to H5Pget_filter_by_id2(). Add simple regression test for H5Pget_filter_by_id1(). Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14193] Description:Quincey Koziol2007-10-081-3/+3
| | | | | | | | | | | | | | | | | | | Make H5Dopen versioned and change all internal usage to use H5Dopen2 Add simple regression test for H5Dopen1 Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r13253] Updated all C and C++ style source code files with the THG ↵Albert Cheng2007-02-071-2/+3
| | | | | | | | | copyright notice. Tested platform: Kagiso only since it is only a comment block change. If it works in one machine, it should work in all, I hope. Still need to check the parallel build on copper.
* [svn-r13108] Cleaned up some warnings.James Laird2007-01-051-0/+2
| | | | | Tested on kagiso; I have another checkin coming, after which I'll run more extensive tests. Changes are pretty minor.
* [svn-r12787] Fix some references to Variable-length packet table functions.James Laird2006-10-191-0/+13
| | | | | | | For some reason, only Visual Studio DLLs complained about these. Current code compiles for me under Visual Studio and generates no related warnings on juniper.
* [svn-r12773] Removed Variable-length packet tables from the HL libraries.James Laird2006-10-171-0/+2
| | | | | | | This is a quick change to make sure nothing breaks; VL functions in the header files have been #ifdef'd out. Tested on mir.
* [svn-r12753] Added 1.6 compatibility support for packet table test.James Laird2006-10-121-0/+10
| | | | Tested on mir.
* [svn-r12746] Changed Packet Table compression to what is hopefully a more ↵James Laird2006-10-111-52/+61
| | | | | | | | | portable test (apparently, there are some systems for which compression makes things bigger :/ ). Tested on heping.
* [svn-r12735] Description:Quincey Koziol2006-10-091-40/+39
| | | | | | | | | | Clean up some compiler warnings and resolve some inconsistenceis between hsize_t and size_t in the interface. Tested on: FreeBSD/32 4.11 (sleipnir) w/threadsafe Linux/32 2.4 (heping) w/FORTRAN & C++ Linux/64 2.4 (mir) w/enable-1.6-compat
* [svn-r12686] Added compression to Packet Tables. Now both C and C++ packet ↵James Laird2006-09-261-35/+164
| | | | | | | | | | | | | | | | tables have an extra parameter that sets the deflate filter. Added tests, made examples use the new APIs. Cleaned up include files a little and removed some casts that I hope are superfluous. If anybody encounters strange errors in the packet table tests where the chunk size is set to some extremely large value, please let me know, but I was unable to reproduce this error on any system. Tested on mir, heping, sol, juniper, VS 6.0. Looked for the chunk size error on several other systems a month or two ago.
* [svn-r12576] Added funtions to query the "current position" for Packet ↵James Laird2006-08-141-0/+12
| | | | Tables in C and C++.
* [svn-r12314] Purpose:Quincey Koziol2006-04-291-50/+51
| | | | | | | | | | | | | | Code cleanup Description: Big clean up on high-level library code, including: - Removing include of HDF5 private header file(!) - Reduce number of compiler warnings - Untangle header files, etc. Platforms tested: FreeBSD 4.11 (sleipnir) w/C++ Linux 2.4/64 (mir) w/C++ & FORTRAN
* [svn-r12229] Purpose:Pedro Vicente Nunes2006-04-121-2/+2
| | | | | | | | | | | | | | | | | | | | | new feature Description: 1) separated the HL library into "public" and "private" header files, with the same caracteristics as the basic library 2) added the public headers to hdf5.h (with a conditional include macro, defined in configure.in) 3) added the path to HL in all Makefile.am 's , because of the inclusion in hdf5.h Solution: Platforms tested: linux 32, 64 AIX solaris with fortran and c++ (one packet table example fails) Misc. update:
* [svn-r11537] Purpose:Albert Cheng2005-10-111-12/+13
| | | | | | Fixed the copyright notice. Tested in heping.
* [svn-r11245] Purpose:Quincey Koziol2005-08-131-12/+12
| | | | | | | | | | | | | | | | | | | | Code cleanup Description: Trim trailing whitespace, which is making 'diff'ing the two branches difficult. Solution: Ran this script in each directory: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r10801] Purpose:James Laird2005-05-251-1/+1
| | | | | | | | | | Typo correction Description: Caught a very minor typo in test output. Fixed it. Platforms tested: None; cosmetic change.
* [svn-r10736] Purpose:Quincey Koziol2005-05-071-9/+2
| | | | | | | | | | | Code cleanup Description: Clean up some compiler warnings Platforms tested: FreeBSD 4.11 (sleipnir) h5committest
* [svn-r10234] Purpose:James Laird2005-03-181-0/+907
Added Packet Table to high-level APIs Description: The Packet Table is an API that allows the user to append records ("packets") to a table, and read the back again. It supports fixed-length records with a defined datatype and variable-length records. It also supports a "current record" index to track the user's position in the table. Solution: The Packet Table code lives in hl/src, and its tests in hl/test. Some code is shared between the H5TB table and the H5PT Packet Table in the form of functions in H5HL_private.c. Some documentation exists for a previous version of the API. Updated documentation and C++ wrapper API coming soon. Platforms tested: sleipnir, eirene, copper, modi4
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