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* Multiple changes to bring branch up-to-date (#87)Allen Byrne2020-11-201-4/+4
| | | | | Correct TARGET variable and CMake config file location. Add option to allow filter plugins to be built inline. Update CMake tools macros.
* Source formattedAllen Byrne2020-10-0112-6477/+6590
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* Merge clang-format changes from developAllen Byrne2020-10-012-256/+293
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* Update configure and Makefile.ins after bin/reconfigure.Larry Knox2020-06-221-1/+2
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* Fix ifort warning flag.Larry Knox2020-05-041-0/+3
| | | | | | | | Restore AC_DEFUN([PAC_PROG_FC_DEFAULT_REALisDBLE] in m4/aclocal_fc.m4. Add --enable-symbols, --enable-profiling, and --enable-optimization options to autotools configure; all configure flags for --enable-production and --disable-production should match HDF5 1.10 and 1.12 production and debug default flags.
* Update to use optimization flags, C++ error flags, and correctLarry Knox2020-04-301-0/+2
| | | | libhdf5.settings.in to remove unworkable changes.
* TRILAB-192 - merge changes from developAllen Byrne2020-04-071-0/+4
| | | | Single source, config files, for warnings for both autotools and CMake. Update CMake libraries, tools, tests to use correct flags.
* Autotools reconfigure updateAllen Byrne2020-03-311-2/+3
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* TRILAB-192 merging warnings changes from developAllen Byrne2020-03-311-1/+0
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* Merge changes from other branchesAllen Byrne2020-02-291-1/+1
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* Merfge changes to CMake test options and add sanitizersAllen Byrne2020-01-201-1/+3
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* Ran bin/reconfigurebyrn2019-10-071-0/+3
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* Add changes to Makefile.in files and four H5e*.h files from running ↵Larry Knox2019-08-281-4/+5
| | | | bin/reconfigur.
* Fix merge issues for MPIAllen Byrne2019-08-231-6/+6
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* OESS-29 Fix shared MPI builds, more HD prefixAllen Byrne2019-08-226-92/+92
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* Correct test logicAllen Byrne2019-08-181-5/+5
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* Merge mostly whitespace changes from 1.10 branchAllen Byrne2019-08-1810-879/+870
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* Merge of HDFFV-10845, 10529 from developAllen Byrne2019-07-273-195/+221
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* Reconfigured autoconf filesdpopat2019-07-191-0/+2
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* Add fixes that were mistakenly omitted from merge of pull request 1594Neil Fortner2019-05-091-2/+2
| | | | to 1.8 branch.
* Fix issue with direct chunk write not updating the "last chunk" indexNeil Fortner2019-05-071-5/+216
| | | | | cache. Fix issues involving datasets being "not allocated" when they contain cached raw data.
* Merge in CMake changes from developAllen Byrne2019-04-041-2/+2
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* Merge CMake changes from 1.10 to 1.8Allen Byrne2018-10-021-12/+13
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* Change CMake min to 3.10Allen Byrne2018-03-091-1/+1
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* HDFFV-10392,10393,01385 merge from developAllen Byrne2018-01-221-5/+1
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* Add assignment to get value from environment variable realtimeOutput.lrknox2017-12-041-22/+56
| | | | Propagate changes to Makefile.ins with bin/reconfigure.
* HDFFV-10321 merge from developAllen Byrne2017-11-021-1/+1
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* Merge branch '1.8/master' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 ↵lrknox2017-08-251-4/+2
|\ | | | | | | into hdf5_1_8
| * Disable building of libdynlib* dynamically loaded plugin test librarieslrknox2017-06-141-0/+1
| | | | | | | | | | | | | | on CYGWIN. Added known problem entry to RELEASE.txt. Set version for 1.8.19 release. Barbara updated contents of README.txt file.
| * Moved libdynlib* plugin test libraries to noist_LT_LIBRARIES with addedlrknox2017-06-121-4/+1
| | | | | | | | | | | | | | flag '-rpath /nowhere' to stop them being installed while keeping them from linking with libhdf5, etc. Incremented version to 1.8.19-pre1 and ran bin/release to create tar and zip files for testing.
* | generated reconfigure files for configure changesM. Scot Breitenfeld2017-08-041-0/+1
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* Update text in COPYING files in subdirectories to match changes tolrknox2017-05-242-7/+15
| | | | | | | | | copyright notices in source files. Update Copyright notices in acsite.m4 and bin/yodconfigure that were overlooked by chkcopyright. Remove broken and unnecessary urls from comments in hl/fortran/src/H5IMcc.c and hl/src/H5IM.c. Commit bin/reconfigure changes to generated files.
* Merge branch 'hdf5_1_8' of ↵lrknox2017-05-201-2/+14
|\ | | | | | | https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_8
| * Minor modifications for HDFFV-9934Vailin Choi2017-05-181-2/+14
| | | | | | | | | | Print out failure/success messages from running the tests in hl/test/test_dset_opt.c. Tested on emu, quail, kituo, platypus.
* | Change copyright headers to replace url referring to file to belrknox2017-05-1615-90/+60
|/ | | | removed and replace it with new url for COPYING file.
* Adds a new H5DO HL test that ensures chunk overwrites work properly.Dana Robinson2017-05-121-12/+125
| | | | Part of HDFFV-10187.
* Windows does not know what a uint isAllen Byrne2017-05-111-88/+88
| | | Index value used in math operation with hsize_t
* Merge pull request #485 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:hdf5_1_8 to ↵Vailin Choi2017-05-111-296/+776
|\ | | | | | | | | | | | | | | hdf5_1_8 * commit '8c2d4c354413d4f3578aa30cf28ee4c4f5c137cf': Incorporate additional code changes for the H5DOread_chunk patch from GE healthcare (HDFFV-9934) Modifications made based on pull request (#485) comments. Incorporate additional code changes for the H5DOread_chunk patch from GE healthcare (HDFFV-9934) Incorporate the code changes that were missing from the original patch: (1) Additional tests in hl/test/test_dset_opt.c (2) Fix in src/H5Dchunk.c for direct access when an entry is in chunk cache but not dirty Tested on playtpus, ostrich, kituo, mayll, osx1010test, quail, emu.
| * Incorporate additional code changes for the H5DOread_chunk patch from GE ↵Vailin Choi2017-05-111-61/+61
| | | | | | | | | | | | healthcare (HDFFV-9934) Modifications made based on pull request (#485) comments.
| * Incorporate additional code changes for the H5DOread_chunk patch from GE ↵Vailin Choi2017-05-031-267/+747
| | | | | | | | | | | | | | | | | | healthcare (HDFFV-9934) Incorporate the code changes that were missing from the original patch: (1) Additional tests in hl/test/test_dset_opt.c (2) Fix in src/H5Dchunk.c for direct access when an entry is in chunk cache but not dirty Tested on playtpus, ostrich, kituo, mayll, osx1010test, quail, emu.
* | Move libdynlib* test lib files from lib_LTLIBRARIES to dyn_LTLIBRARIESlrknox2017-05-101-2/+5
|/ | | | | | and other changes to Makefiles and config/conclude.am to eliminate link errors with new libdynlib*_la_LDFLAGS which were added to stop libdynlib* files linking to external libraries.
* Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_8)Allen Byrne2017-04-061-80/+371
|\ | | | | | | | | | | * commit '043aabe8cbd1abcc41ea2fb887b3a8ddd706500c': Made corrections according to code review. 1) Change fprintf to HDfprintf in hl/test/test_dset_opt.c 2) Remove extra line in src/H5Dpkg.h 3) Add one more test to hl/test/test_dset_opt.c Tested on mayll and osx1010test. Incorporate patch from GE Heathcare (HDFFV-9934) 1) Integrate the patch 2) Fix bugs when debugging the patch 3) Add test to hl/test/test_dset_opt.c Tested on moohan, ostrich, platypus, emu, osx1010test, quail, kituo, mayll.
| * Made corrections according to code review.Vailin Choi2017-04-031-28/+77
| | | | | | | | | | | | | | 1) Change fprintf to HDfprintf in hl/test/test_dset_opt.c 2) Remove extra line in src/H5Dpkg.h 3) Add one more test to hl/test/test_dset_opt.c Tested on mayll and osx1010test.
| * Incorporate patch from GE Heathcare (HDFFV-9934)Vailin Choi2017-04-031-69/+311
| | | | | | | | | | | | | | 1) Integrate the patch 2) Fix bugs when debugging the patch 3) Add test to hl/test/test_dset_opt.c Tested on moohan, ostrich, platypus, emu, osx1010test, quail, kituo, mayll.
* | Merge/port changes from develop back to 1.8 for tools and cmakeAllen Byrne2017-03-291-3/+3
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* Delete files inadvertently checked in with version changes following ↵hdftest2017-02-222-0/+0
| | | | snapshot release. (Changed daily test command to add specific files for commit instead of all new and modified files.)
* Snapshot version 1.8 release 19 (snap1)HDF Tester2017-02-203-1/+2
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* Delete files inadvertently checked in with version changes following ↵hdftest2017-02-163-1/+1
| | | | | | snapshot release. Add 2 test files to testfiles to be removed list in hl/test/Makefile.am.
* Snapshot version 1.8 release 19 (snap0)HDF Tester2017-02-132-0/+0
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* HDFFV-9875 Bring changes from develop branchAllen Byrne2017-02-062-11/+24
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