| Commit message (Collapse) | Author | Age | Files | Lines |
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doesn't return correct
file size from MPI_File_get_size. Bypass this problem by replacing it with
stat. Add an option --disable-mpi-size in configure to indicate this function
doesn't work properly. Add a test in testpar/t_mpi.c, too. If it returns wrong
file size, print out a warning.
Tested on kagiso (parallel) because already tested the same change to v1.6 on
several platforms (kagiso, cobalt, copper, and sol).
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Regenerate configuration files after latest checkin
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most recent versions of the autotools.
Updated autotool versions are: autoconf 2.61, automake 1.10.0, and libtool 1.5.22.
Tested on kagiso.
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bug fixes
substituted hize_t array index variables for int
stack corruption in the h52gif reading routine, wrote a new routine
shell script for gif tests, added check of program return value
enabled the gif test script
tested: linux pgcc, solaris, linux 64
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Check in changes from Elena and I to get pgcc compiler working again.
Primarily (all?) changes to move from using 'hsize_t' as array index to using
something else ('size_t') mostly.
Tested on:
Linux/32 2.4 kagiso w/pgcc
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some comments in the
template file config/Makefile.am.blank.
This is just a cleanup checkin. Tested on kagiso.
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bin/makehelp (formatting
the output in the makefile was pretty hard).
Tested that make still works on kagiso; no code changes at all.
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Description: Multiple copies of Copyright appeared in Makefile.in. This was
due to automake copying the copyright right in the included files such as
config/commence.am.
Solution: Automake treats double hashes as comments and does not copy them
to Makefile.in. Changed all the copyright notices in config/*.am to use
double hashes for the Copyright right notice.
Tested: kagiso via bin/reconfigure.
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Dependency line
in the Makefile.
Makefile change only. Tested on kagiso, to be used to test on cobalt.
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Ran reconfigure to generate the Makefile.in files.
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copyright notice.
Tested platform:
Kagiso only since it is only a comment block change. If it works in one
machine, it should work in all, I hope. Still need to check the parallel
build on copper.
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bug fix on H5TBwrite_fields_index and name functions, the space on the H5Dwrite call was all selected
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It seems that while Cygwin supports the time command, it has trouble with
the syntax
srcdir="../../hdf5/test" time ./testhdf5
and complains.
The solution is to test the above case in configure and not to use the time
command if it fails; Cygwin is fine with
srcdir="../../hdf5/test" ./testhdf5
Tested on Cygwin and kagiso. This feature shouldn't be a major compatibility
problem since every platform but Cygwin is already fine with the current
syntax.
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Tested on kagiso; I have another checkin coming, after which I'll run more
extensive tests. Changes are pretty minor.
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The version of libtool used by HDF5 isn't directly affected by the reconfigure
script; instead, libtoolize --force must be used by hand. Libtool was the
source of the problem, so rolling its version back to 1.5.14 should solve the
issue (at least temporarily).
Reconfigure should still work on both heping and kagiso.
Tested on heping, kagiso, and tg-login3.
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Hopefully this will fix
issues on tg-login3.
bin/reconfigure should still work on both heping/mir and kagiso.
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Should disable linking against shared libraries in Fortran for compilers that
don't support shared libraries.
Should also fix problem when the wrong Fortran file extension was specified.
If these changes don't solve the Daily Test issues, I'll look at backing out
the autotool version change until I have time to fix them.
Tested on heping, kagiso, juniper.
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Linux machines.
Updated to the latest versions of autotools.
Tested on kagiso, heping, and juniper. Let me know if you have any problems.
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Packet Table
compression test.
Tested that the file is removed on juniper and heping.
Running reconfigure also regenerated the H5E* files (I think this means
somebody updated these files but didn't run reconfigure).
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For some reason, only Visual Studio DLLs complained about these.
Current code compiles for me under Visual Studio and generates no related
warnings on juniper.
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This is a quick change to make sure nothing breaks; VL functions in
the header files have been #ifdef'd out.
Tested on mir.
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Tested on mir.
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portable test
(apparently, there are some systems for which compression makes things bigger
:/ ).
Tested on heping.
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only tested
if it is enabled.
Added Direct VFD status to the configure summary.
Removed a line left over from pablo support. Oops!
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Clean up some compiler warnings and resolve some inconsistenceis between
hsize_t and size_t in the interface.
Tested on:
FreeBSD/32 4.11 (sleipnir) w/threadsafe
Linux/32 2.4 (heping) w/FORTRAN & C++
Linux/64 2.4 (mir) w/enable-1.6-compat
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Clean up some compiler warnings.
Tested on:
FreeBSD/32 4.11 (sleipnir) w/threadsafe
Linux/32 2.4 (heping) w/FORTRAN & C++
Linux/64 2.4 (mir) w/enable-1.6-compat
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utility
and quote its arguments. Also checks for the 'socket' library on
Solaris.
If this patch passes the Daily Tests and makes the user happy, I'll
port it back to the 1.6 branch.
Tested on mir and sol.
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tables
have an extra parameter that sets the deflate filter.
Added tests, made examples use the new APIs.
Cleaned up include files a little and removed some casts that I hope are
superfluous. If anybody encounters strange errors in the packet table
tests where the chunk size is set to some extremely large value, please
let me know, but I was unable to reproduce this error on any system.
Tested on mir, heping, sol, juniper, VS 6.0. Looked for the chunk size
error on several other systems a month or two ago.
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Re-run 'bin/reconfigure' script after recent checkins
Tested on:
none - shouldn't have any affect on compilation
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Description:
Add per-directory abbreviated copyright notices
(abbreviated COPYING files pointing to full notices).
Tested:
MANIFEST verified; not otherwise tested.
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Since these examples need to follow filesystem paths, the Makefiles need
to create directories in the examples directory; added this to the
Makefile.am.
Tested on Windows, mir, juniper
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VFD is being used
when a test is run.
Running reconfigure also regenerated error header files (because someone edited
them manually?).
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Tables in C and C++.
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"make check-vfd" will now run all tests in the test directory with different
file drivers (at least, all of those tests that use the testing framework's
FAPL). Tests that fail will be skipped.
This is not a perfect fix, but is better than nothing.
Along with this change, check-vfd should be added to the Daily Tests.
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Code cleanup
Description:
Trim trailing whitespace in Makefile.am and C/C++ source files to make
diffing changes easier.
Platforms tested:
None necessary, whitespace only change
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Configuration feature
Description:
'make install' now tests both static and shared libraries if both are installed.
Solution:
Previously, shared libraries were only tested when static libraries were not installed.
Also cleaned up line in commence.am that was including HL library in all Makefiles.
Platforms tested:
mir (Makefile change only)
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Bug fix - bugzilla #552
Description:
On Cray X1, trying to use : as an argument confused the system.
Solution:
Added a test in configure to see if : as an argument is bad.
If so, skipped the test.
Platforms tested:
mir, Cray X1 (change to configure only)
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Description: dtype_file.txt is a text file for testing complicated compound type
for H5LTtext_to_dtype(). dtype_file_readable.txt is just a human-readable version
of dtype_file.txt for debugging purpose.
Platforms tested: No test.
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Bug fix.
Description:
The ${TR}, though avoid the error, is inconvenient. It is needed
because configure.in use the char range in the style of 'a-z'.
The other style of '[a-z]' is more commonly accepted by all tr
but autoconf tends to strip away [], making the syntax rather
clumsy.
Solution:
Learned from autoconf that it avoids the use of character range
by just spell all the letters out. Changed our tr commands to
use those variables defined by autoconf. Also removed the
definition of ${TR} since it will cause inconsistancy when
autoconf also use plain 'tr' in its generated code.
The Makefile.in are changed because the elimination of ${TR} from
configure triggered its removal from all Makefil.in. That is okay
because ${TR} is not used at all in Makefile.
Platforms tested:
h5committested. (sol failed to connected). also tested in shanti
using both /usr/ucb/tr and /bin/tr (the bad one before.)
Misc. update:
Updated both INSTALL and RELEASE files.
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Description: Yesterday, a definition of the macro YY_BUF_SIZE of 256KB
was committed in, but copper complained it can't be redefined.
Solution: Added #ifdef and #undef to make sure the macro is undefined
first. Also integrated a complicated compound type test. It reads
input from a text file. The datatype is unusually large, of 101 member
fields.
Platforms tested: h5committest and fuss.
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Code cleanup
Description:
Big clean up on high-level library code, including:
- Removing include of HDF5 private header file(!)
- Reduce number of compiler warnings
- Untangle header files, etc.
Platforms tested:
FreeBSD 4.11 (sleipnir) w/C++
Linux 2.4/64 (mir) w/C++ & FORTRAN
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Several bug fixes
Description:
Added config file for Cray X1 (previous file was misnamed)
Simplified some code in hyperslab.c test that seemed to have been
confusing compiler on Cray X1.
Fixed typo in config/commence.am
Cleaned up hl/src/Makefile.am
Solution:
All four fixes should be straightforward. The failure on Cray was
very difficult to debug, but involved arithmetic errors.
This change seems to fix it.
Platforms tested:
heping, copper, sol, some Cray X1 (more testing when system comes back up)
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new feature
Description:
1) separated the HL library into "public" and "private" header files, with the same caracteristics as the basic library
2) added the public headers to hdf5.h (with a conditional include macro, defined in configure.in)
3) added the path to HL in all Makefile.am 's , because of the inclusion in hdf5.h
Solution:
Platforms tested:
linux 32, 64
AIX
solaris
with fortran and c++
(one packet table example fails)
Misc. update:
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Bug fix
Description:
Previous checkin did a bad thing; 'make clean' failed in example directories.
Solution:
Fixed commence.am so that examples no longer break, and fixed a mistake
in conclude.am.
Platforms tested:
heping (minor makefile change)
Misc. update:
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Bug fix
Description:
make check-clean didn't clean results of example tests
Solution:
Fixed Makefiles so that check-clean recurses into example directories.
Also a little Makefile cleanup.
Platforms tested:
mir, modi4, heping, copper
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Description: Revise a few details of H5LTtext_to_dtype() and H5LTdtype_to_text(),
1. changed the DDL definition of string, opaque, and compound types.
2. added a new parameter of H5LT_lang_t type to these two functions.
Platforms tested: h5committest and fuss.
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Description: Renamed lex.yy.c to H5LTanalyze.c, y.tab.c to H5LTparse.c, and
y.tab.h to H5LTparse.h in hl/src. Changed definition of opaque type to ommit the tag.
Changed the test for opaque type in hl/test, too.
Platforms tested: h5committest, fuss, and sleipnir.
Misc. update: MANIFEST
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Description: This is the second step of conversion between data type and
text, H5LTdtype_to_text().
Solution: Similar to h5dump, this function print the DDL description of
a data type into a string.
Platforms tested: h5committest and fuss.
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Code cleanup
Description:
Fix a bunch of warnings flagged by Windows compilers.
Platforms tested:
FreeBSD 4.11 (sleipnir)
Too minor to require h5committest
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Bug fix
Description:
Fortran type generation was broken in two ways. Fixed both.
Solution:
Firstly, there were a couple of path problems. Fixed a typo and
specified the full path of a file.
Secondly, the dependencies weren't right when building with HDF5-specific
commands (make lib, make check-s, etc.). Tweaked dependencies
to fix the problem.
Platforms tested:
mir, modi4, sleipnir
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