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* Fix NoFilter buildAllen Byrne2020-05-201-1/+1
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* Trim trailing whitespaceQuincey Koziol2020-05-2027-448/+448
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* Fix shadowed typeAllen Byrne2020-05-201-3/+3
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* TRILAB-192 update LTparse filesAllen Byrne2020-05-203-1206/+1129
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* Minor updates and fix settings for fortran flagsAllen Byrne2020-05-201-1/+1
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* Remove overzealous additionsAllen Byrne2020-05-202-3/+1
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* Flag construction must be after compiler detectionAllen Byrne2020-05-203-59/+27
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* TRILAB-192 add c++ and fortran warnings build systems one fileAllen Byrne2020-05-209-61/+44
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* Update Tools library to be better compatible with VOL connectorsJordan Henderson2020-05-201-1/+9
| | | | | | | | | | | | | | | | | | | | | Modify h5repack to integrate with VOL connectors Update tools library to accomodate VOL connectors Update logic in h5tools_fopen for VOL connectors Add command-line options to h5repack for specifying in/out VOL connectors Implement h5tools_set_vol_fapl Fix library shutdown issue Integrate ROS3 and HDFS VFDs into new h5tools_get_fapl() scheme Avoid H5Ocopy in h5repack when using different VOL connectors Update h5tools_test_utils.c for ROS3 and HDFS integration
* TRILAB-192 restrict extensive warnings to librariesAllen Byrne2020-05-202-0/+12
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* TRILAB-142 Change minimum CMake version to 3.12Allen Byrne2020-05-2015-15/+15
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* HDFFV-11012 - add correct fortran include path propertiesAllen Byrne2020-05-201-2/+2
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* Cleaned up remaining warnings in high-level library.Dana Robinson2020-05-207-718/+988
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* HDFFV-11011 correct issues with target file extensionAllen Byrne2020-05-202-20/+8
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* Squashed commit of the token_refactoring branch:Dana Robinson2020-05-202-64/+111
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* HDFFV-11001 fix if blockAllen Byrne2020-05-201-3/+2
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* HDFFV-11001 need to qualify all by parallel or serial typesAllen Byrne2020-05-207-9/+8
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* HDFFV-11001 Add fine control over testingAllen Byrne2020-05-2011-17/+27
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* remove unnecessary check macrokmu2020-05-201-2/+1
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* fix intel compile warningskmu2020-05-201-1/+2
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* Revert "fix warnings from Intel compiler"kmu2020-05-202-6/+6
| | | | This reverts commit 8b9338ab57eec0cc8fa5a36c44d7b28e52e9a466.
* Revert "fix issues from previous PR comments"kmu2020-05-202-6/+6
| | | | This reverts commit d242a900f420b040e364f6c0976c01593e955db3.
* Revert "using a different MACRO"kmu2020-05-201-2/+1
| | | | This reverts commit fc61b7a9f3a38331809ebcb6247482943947cdb8.
* using a different MACROkmu2020-05-201-1/+2
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* fix issues from previous PR commentskmu2020-05-202-6/+6
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* fix warnings from Intel compilerkmu2020-05-202-6/+6
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* Small changes from the token_refactoring branch, to reduce the delta to developQuincey Koziol2020-05-201-18/+18
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* In portable shell scripts (using #!/bin/sh) we have to use single squareDavid Young2020-05-201-1/+1
| | | | brackets, [ ], instead of the bash-ism double square brackets, [[ ]].
* Correct assignmentAllen Byrne2020-05-201-1/+1
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* Fix java include, h5watch and remove clang tool.Allen Byrne2020-05-201-10/+11
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* HDFFV-10974 Change defines to eliminate Windows conflictAllen Byrne2020-05-208-180/+175
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* Fix windows 10 compile errorAllen Byrne2020-05-201-6/+18
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* Revert "Make a squash commit of 'Quiet some warnings by adjusting warnings ↵David Young2020-05-202-2/+2
| | | | level and fixing some code.' (commit 5c911d8baf3)"
* Revert "Oops, remove more C99 designated initializers for VS 2010 ↵David Young2020-05-201-5/+1
| | | | | | compatibility." This reverts commit f907b511d06612dafc7814a7c30f2f3d2b76d52b.
* Oops, remove more C99 designated initializers for VS 2010 compatibility.David Young2020-05-201-1/+5
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* Avoid unused-variable warnings: change static const strings in a coupleDavid Young2020-05-201-1/+1
| | | | of header-file templates to #defines.
* Initialize a variable before its first use.David Young2020-05-201-1/+1
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* Apparently, + has no special meaning, and neither does \+, in so-calledDavid Young2020-05-202-2/+2
| | | | | | | | "obsolete" / POSIX "basic" regular expressions. Also, not every version of `sed` out there supports the `-E` option. So delete the -E flag and use the regex `[^/][^/]*` instead of `[^/]+`. Add config/netbsd to the MANIFEST.
* HDFFV-10876 Update h5dump and h5ls for new ref api.Allen Byrne2020-05-201-70/+70
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* Make these scripts relocatable again: derive a relative path for theDavid Young2020-05-202-2/+49
| | | | | | | original installation prefix from the examples prefix. Use that relative path to locate the current installation prefix, always. Fall back to an absolute installation prefix if the relative path cannot be derived.
* So that I can use PASSED(); anywhere a statement can go, #define PASSED() withDavid Young2020-02-281-1/+1
| | | | a do-while wrapper.
* Merge all of my changes from merge-back-to-feature-vfd_swmr-attempt-1,David Young2019-12-0968-2846/+3096
| | | | | | | | including the merge of `hdffv/hdf5/develop`, back to the branch that Vailin and I share. Now I need to put this branch on a fork with a less confusing name than vchoi_fork!
* Introduce PRI*HADDR and PRI*HSIZE for printing haddr_t and hsize_t.David Young2019-10-031-1/+1
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* Make some NetBSD compatibility patches.David Young2019-10-036-12/+12
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* Develop normalization with vol_integration.Dana Robinson2018-09-191-1/+1
| | | | | Mostly peripheral things like the tools and wrappers, with just enough core library code to support that.
* HD prefix and whitespaceAllen Byrne2018-08-283-152/+152
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* Change prefix in example scripts to relative path to bin. This was doneLarry Knox2018-08-233-3/+3
| | | | | for 1.8, and works wherever installed without the need to replace the original prefix.
* Add mpi include folders for fortran C objectsAllen Byrne2018-06-061-2/+2
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* Merge pull request #1043 in HDFFV/hdf5 from ↵Dana Robinson2018-05-318-3041/+377
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:h5do_direct_chunk_hl_to_src to develop * commit '1da9c5545c013ebc540ba3044810889d4acfa5be': Restored some unused #defines to the deprecated section of H5Dpublic.h. Added deprecated symbol wrappers for the H5DOwrite/read_chunk wrappers. Updated commenting in the H5DO compat test. Stripped out most of the duplicated functionality in the H5DO compat test. * Added H5DO compatibility functions. * Changed the offset copy to use an array on the stack. * Yanked some unused #defines. * Fixed the error tests * Moved common functionality into helper functions Normalize with trunk prior to update merge Fixed a warning. Finished move of H5DOread/write_chunk calls to H5D. First stage of moving H5DOread/write_chunk() to src/ and making them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform and renamed to direct_write_perf. * Updated autotools and CMake files.
| * Merge branch 'develop' into h5do_direct_chunk_hl_to_srcDana Robinson2018-05-1512-351/+288
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