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* [svn-r20169] Correct name of tool from hdf2gif to h52gif.Allen Byrne2011-03-011-4/+4
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* [svn-r20157] Bring CMake changes to branch up to r20156 from trunkAllen Byrne2011-02-257-15/+13
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* [svn-r20143] Correct misplaced bracketAllen Byrne2011-02-221-2/+2
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* [svn-r20137] Correct hl/fortran/src INCLUDE_DIRECTORIES.Allen Byrne2011-02-222-2/+3
| | | | Add new efc files and projects to windows
* [svn-r20128] Add fortran mod folder to INCLUDE_DIRS for gfortran 4.2.x.Allen Byrne2011-02-211-1/+1
| | | | | | Add test dependicies to correct the order of tests - cmake 2.8.4 bug - but also will improve cmake parallel testing. Tested: local linux, jam
* [svn-r20084] Add missing library referenceAllen Byrne2011-02-111-1/+1
| | | | Tested: windows
* [svn-r20082] DLL visibility names needed to be updated in cstub in windows ↵Allen Byrne2011-02-111-96/+96
| | | | | | using cmake Tested: windows
* [svn-r20080] Remove obsolete lines (commented) after correcting Fortran ↵Allen Byrne2011-02-101-6/+0
| | | | | | handling in CMake files Tested: local: linux
* [svn-r20079] Correct Fortran handling in CMake filesAllen Byrne2011-02-105-65/+26
| | | | Tested: local: linux
* [svn-r20062] Description:Quincey Koziol2011-02-081-164/+102
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r20061 from trunk to 1.8 branch: Bring changes from Coverity branch to trunk: r19930: Fix memory leaks involving VL attributes in h5repack and h5diff. The buffers in copy_attr and diff_attr were not checked for the presence of a vlen before being freed, and vlen storage was never reclaimed. Added checks and calls to H5D_vlen_reclaim(). r19933: Purpose: Fix memory leak in H5L_move_cb() Description: H5L_move_cb copied the source link using H5O_msg_copy() but freed it manually using H5MM_xfree(). Since H5O_link_copy allocates the link using H5FL_MALLOC, this causes the link to be allocated from the free list but is never put back on the free list when it is freed. This prevents the link free list from shutting down properly. Modified H5L_move_cb() and H5L_move_dest_cb() to free the link properly using H5O_msg_free(). r19973: Fix resource leaks by freeing string created by HD5f2string r19974: Issue #345: Inialize buf variable to null Tested on: Mac OS X/32 10.6.6 (amazon) w/debug & production (h5committested on Coverity branch)
* [svn-r19913] Correct format of empty parameterAllen Byrne2011-01-051-1/+1
| | | | Tested: local linux
* [svn-r19911] Change how LINK_FLAGS for fortran are appended on Windows - ↵Allen Byrne2011-01-051-1/+5
| | | | | | correct for just shared libs bring r19910 from trunk
* [svn-r19908] Change how LINK_FLAGS for fortran are appended on WindowsAllen Byrne2011-01-053-11/+5
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* [svn-r19906] Windows: Correct how fortran links in CRT library. Also correct ↵Allen Byrne2011-01-048-18/+18
| | | | | | macro use for checking libtype. Tested: Windows
* [svn-r19898] Remove use of /MT compile flag for building static libs and ↵Allen Byrne2010-12-306-9/+2
| | | | programs. Added BUILT_AS_STATIC_LIBRARY define to set the windows import/export defines correctly for static libraries.
* [svn-r19871] Add tests for examples.Allen Byrne2010-12-033-23/+60
| | | | | | Bring r19870 from trunk Tested: local linux
* [svn-r19862] Updated libtool to version 2.4, autoconf to version 2.68, and ↵Larry Knox2010-12-0114-0/+42
| | | | | | m4 to version 1.4.15. Tested with h5committest on amani, jam and heiwa.
* [svn-r19655] Description:Quincey Koziol2010-10-212-133/+94
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r19654 from trunk to 1.8 branch: Bring Coverity revisions from branch back to trunk, and clean up some other misc. compiler warnings also. r19500: Fix coverity items 1446 and 1447. Moved up calls to memset in test_cont in ohdr.c so the test never tries to close uninitialized locations. r19501: Fix coverity items 1398-1445. Various uninitialized variable errors in fheap.c. r19502: Fixed coverity issue 579 and some additional warnings in the file as well. r19503: Bug fix: This fix addressed the "RESOURCE_LEAK" problems #789 and 790, run 26 r19504: minor mods to try to keep coverity from flagging false positives. r19505: Fixed coverity issues 566 - 571. Declared variables that are passed to functions that use them as arrays to be arrays of size 1. Tested on: Mac OS X/32 10.6.4 (amazon) w/debug, production & parallel (h5committested on coverity branch)
* [svn-r19529] Added line to config/examples.am to remove execute permission ↵Larry Knox2010-10-063-0/+3
| | | | | | from example source files that are installed in .../share/hdf5_examples/. This will address bugzilla #2025. Tested with h5committest on amani, heiwa, and jam.
* [svn-r19528] Add clear generated objects commands to test blocks.Allen Byrne2010-10-062-0/+41
| | | | | | | | Add configurefile command to copy CTestCustom to build folder. Bring r19527 back from trunk Tested: local linux
* [svn-r19510] Improve CMake support for CYGWIN.Allen Byrne2010-10-041-4/+4
| | | | | | | | Correct script comment in testh5diff.sh Bring r19509 back from trunk Tested: Windows Cygwin
* [svn-r19451] Update version of 1.8 branch to HDF5 1.8.7-snap0Mike McGreevy2010-09-213-3/+3
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* [svn-r19438] Correct use of lib, include, bin in INSTALL commands to use ↵Allen Byrne2010-09-204-12/+25
| | | | | | proper variables. Tested: local linux
* [svn-r19408] In this revision the '/' after ${DESTDIR} wherever it occursLarry Knox2010-09-1621-86/+238
| | | | | | | | | | | | | | | | | | | | has been removed. According to the official description of DESTDIR by Gnu at http://www.gnu.org/prep/standards/html_node/DESTDIR.html, DESTDIR is prepended to the normal and complete install path that it precedes for the purpose of installing in a temporary directory which is useful for building rpms and other packages. The '/' after ${DESTDIR} will be followed by another '/' at the beginning of the normal install path. When DESTDIR is empty the path then begins with '//', which is incorrect and causes problems at least for Cygwin. The change made in config/commence.am affects many Makefile.*s when bin/reconfigure is run. EXAMPLEDIRs had to be corrected individually. Also the scripts to run examples after they are installed have checks added to see that the fortran and c++ directories are present before trying to run the scripts in them. Tested with h5committest on amani, heiwa and jam.
* [svn-r19371] Updated autoconf to version 2.6.7, libtool to version 2.2.10, ↵Larry Knox2010-09-1014-14/+14
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | and m4 to version 1.4.14. Also added m4 directory for m4 macros according to autoconf suggestion. Tested with h5committest on amani, jam, and heiwa, and on linew. -This line, and those below, will be ignored-- M hdf5_1_8/test/Makefile.in A hdf5_1_8/m4 AM hdf5_1_8/m4/ltsugar.m4 AM hdf5_1_8/m4/libtool.m4 AM hdf5_1_8/m4/ltversion.m4 AM hdf5_1_8/m4/lt~obsolete.m4 AM hdf5_1_8/m4/ltoptions.m4 M hdf5_1_8/configure M hdf5_1_8/Makefile.in M hdf5_1_8/testpar/Makefile.in M hdf5_1_8/configure.in M hdf5_1_8/src/Makefile.in M hdf5_1_8/tools/Makefile.in M hdf5_1_8/tools/misc/Makefile.in M hdf5_1_8/tools/h5dump/Makefile.in M hdf5_1_8/tools/h5repack/Makefile.in M hdf5_1_8/tools/h5jam/Makefile.in M hdf5_1_8/tools/h5diff/Makefile.in M hdf5_1_8/tools/lib/Makefile.in M hdf5_1_8/tools/h5copy/Makefile.in M hdf5_1_8/tools/h5import/Makefile.in M hdf5_1_8/tools/h5stat/Makefile.in M hdf5_1_8/tools/h5ls/Makefile.in M hdf5_1_8/hl/test/Makefile.in M hdf5_1_8/hl/tools/Makefile.in M hdf5_1_8/hl/tools/gif2h5/Makefile.in M hdf5_1_8/hl/Makefile.in M hdf5_1_8/hl/src/Makefile.in M hdf5_1_8/hl/c++/test/Makefile.in M hdf5_1_8/hl/c++/Makefile.in M hdf5_1_8/hl/c++/src/Makefile.in M hdf5_1_8/hl/c++/examples/Makefile.in M hdf5_1_8/hl/fortran/test/Makefile.in M hdf5_1_8/hl/fortran/Makefile.in M hdf5_1_8/hl/fortran/src/Makefile.in M hdf5_1_8/hl/fortran/examples/Makefile.in M hdf5_1_8/hl/examples/Makefile.in M hdf5_1_8/config/commence.am M hdf5_1_8/MANIFEST M hdf5_1_8/c++/test/Makefile.in M hdf5_1_8/c++/Makefile.in M hdf5_1_8/c++/src/Makefile.in M hdf5_1_8/c++/examples/Makefile.in M hdf5_1_8/bin/ltmain.sh M hdf5_1_8/bin/reconfigure M hdf5_1_8/perform/Makefile.in M hdf5_1_8/fortran/test/Makefile.in M hdf5_1_8/fortran/testpar/Makefile.in M hdf5_1_8/fortran/Makefile.in M hdf5_1_8/fortran/src/Makefile.in M hdf5_1_8/fortran/examples/Makefile.in M hdf5_1_8/aclocal.m4 M hdf5_1_8/examples/Makefile.in
* [svn-r19362] Move Windows specific compile and link flags to macrosAllen Byrne2010-09-097-152/+13
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* [svn-r19341] Added cmake tests for c++ examplesAllen Byrne2010-09-021-0/+5
| | | | Tetsed: local linux
* [svn-r19337] Change #ifndef _WIN32 to #ifdef H5_HAVE_UNISTD_HAllen Byrne2010-09-011-3/+3
| | | | Tested: windows, heiwa and local linux
* [svn-r19326] Added parallel build commands.Allen Byrne2010-08-3110-25/+27
| | | | | | | | Corrected use/name of source folder aliases. Duplicated FindMPI.cmake so that non-c++ compiler is found first (recommemded commands did not work). Bring r19325 from trunk Tested: local linux with mpich
* [svn-r19238] Description:Quincey Koziol2010-08-123-3/+3
| | | | | | | | | | | | Bring r19237 from trunk to 1.8 branch: Clean up misc. compiler warnings. Tested on: FreeBSD/32 6.3 (duty) in debug mode Mac OS X/32 10.6.4 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode Mac OS X/32 10.6.4 (amazon) w/parallel, in debug mode
* [svn-r19220] Move hl fortran ADD_SUBDIRECTORY to right after fortran ↵Allen Byrne2010-08-101-5/+0
| | | | | | ADD_SUBDIRECTORY. This fixes a problem with compiler generated files not including target module directory on some linux machines. Tested: local linux
* [svn-r19219] Corrected minor format/location of commands.Allen Byrne2010-08-102-5/+3
| | | | Tested: local linux
* [svn-r19036] Added executable Linker Flag for MSVC static builds: ↵Allen Byrne2010-06-297-39/+147
| | | | | | | | /NODEFAULTLIB:MSVCRT Added VERSION vars for inclusion into auto snapshot version update script Tested windows
* [svn-r18916] Description:Quincey Koziol2010-05-271-1/+1
| | | | | | | | | | Bring r18915 from trunk to 1.8 branch: Clean up a couple of compiler warnings (in Windows). Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (too minor to require h5committest)
* [svn-r18913] Added missing fortran library in list of libraries.Allen Byrne2010-05-271-9/+9
| | | | Tested: Windows, local linux
* [svn-r18897] Added fortran /dbglibs option to fortran compile flags for ↵Allen Byrne2010-05-251-0/+10
| | | | | | | | windows intel fortran case. Duplicated windows intel fortran flag block for hl/fortran Tested: windows
* [svn-r18889] Update CMake fortran configure/build with changes from community.Allen Byrne2010-05-251-3/+0
| | | | | | | | - Add an install rule to copy compiled fortran module files - Only build the xlatefile utility if testing and tools are enabled - Don't do MPI HAVE_XXX checks until MPI_FOUND is true - Install needs H5version.h & H5overflow.h to be copied - Add debug information flags to debug compile and link lines for win32 Intel compiler
* [svn-r18883] Maintenance: Brought fixes for bug 1851 (DS failures on PPC) to ↵Elena Pourmal2010-05-222-44/+56
| | | | | | 1.8 branch Platforms tested: juniper-w (Mac PPC), linew (64-bit), jam, amani
* [svn-r18860] pull r18858 from 185;Allen Byrne2010-05-191-10/+5
| | | | Cange allocation of buffer to use the specified dimensions to calculate the size of a data buffer. Also removed any initialized values.
* [svn-r18855] Added CPack commands for installtion programAllen Byrne2010-05-194-9/+15
| | | | Tested: local linux and Windows
* [svn-r18841] Changed version number to 1.8.4-snap0Mike McGreevy2010-05-183-3/+3
| | | | Updated RELEASE.txt file accordingly.
* [svn-r18836] Added code to config files, libhdf5.settings.in and ↵Larry Knox2010-05-1714-0/+28
| | | | | | configure.in to add compiler version information for fortran and C++ in the settings file and the configure output for our common compilers on linux, solaris, and mac(gnu only). Tested: amani, jam, linew (h5committest) and with configure on these machines and tejeda.
* [svn-r18820] Bug fix: Elena Pourmal2010-05-154-114/+244
| | | | | | | | | | | Fixed a bug (1822) in the H5DSdetach_scale function when 0 bytes were allocated after the last reference to a dim. scale was removed from the list of references in a VL element of the DIMENSION_LIST attribute; modified the function to comply with the Spec: DIMENSION_LIST attribute is deleted now when no dimension scales left attached. Platforms tested: jam with electric fence, amani amd linew
* [svn-r18817] Added scripts to compile and run installed examples. The ↵Larry Knox2010-05-1412-21/+410
| | | | | | scripts are installed with the examples, and there is one script to run the scripts for all hl examples and another to run the scripts for all the examples. Tested: amani, jam, linew (h5committest).
* [svn-r18780] Corrected typo of variable used by H5srcdir_str.h.in.Allen Byrne2010-05-121-1/+1
| | | | No test as it is actually not used in branch
* [svn-r18779] Add ${DESTDIR} to scripts and Makefiles so that make ↵Larry Knox2010-05-1215-72/+72
| | | | | | DESTDIR=<install directory> install, installcheck and uninstall is supported for installing examples, since they are now installed as part of make install. This was necessary for rpmbuilds, but should also be supported otherwise. Tested: amani, jam, linew with committest, rpmbuild on jam and amani.
* [svn-r18773] Add files to support building library with CMakeAllen Byrne2010-05-1213-0/+638
| | | | Tested: Local linux
* [svn-r18772] Remove hard coded path to generated file.Allen Byrne2010-05-121-1/+1
| | | | Tested: local linux, windows
* [svn-r18710] Purpose:Mike McGreevy2010-05-0514-14/+14
| | | | | | | | | | | | | | | | | | | | | | | | | | Improve configure's large-file support control. Description: Modified configure to now attempt to add defines necessary for supporting largefiles on all systems, instead of solely on linux. This is in response to user requests to enable largefile support on Solaris by default, as well as to give extra control on AIX (instead of just jamming the necessary flag into the config files). The old --enable-linux-lfs flag is being deprecated in favor of the --enable-largefile flag (enabled by default), which can be used on all platforms. --disable-linux-lfs can still be used to disable largefile support (on linux) when the --enable-largefile flag is not specified. On systems where large files cannot be supported in this manner, configure will report as such. Tested: h5committest AIX (NCSA's blue_print machine) duty, liberty, and linew.
* [svn-r18701] ID 1853:Albert Cheng2010-05-0414-0/+14
| | | | | | | | Added the configure option --enable-h5dump-packed-bits for the h5dump optional feature. Tested: Jam (default and --disable-h5dump-packed-bits).
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