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* Propagate .so number changes to Makefile.ins with bin/reconfigure.lrknox2017-06-023-15/+15
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* Update text in COPYING files in subdirectories to match changes tolrknox2017-05-2421-325/+331
| | | | | | | | | copyright notices in source files. Update Copyright notices in acsite.m4 and bin/yodconfigure that were overlooked by chkcopyright. Remove broken and unnecessary urls from comments in hl/fortran/src/H5IMcc.c and hl/src/H5IM.c. Commit bin/reconfigure changes to generated files.
* Merge branch 'hdf5_1_8' of ↵lrknox2017-05-201-2/+14
|\ | | | | | | https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_8
| * Minor modifications for HDFFV-9934Vailin Choi2017-05-181-2/+14
| | | | | | | | | | Print out failure/success messages from running the tests in hl/test/test_dset_opt.c. Tested on emu, quail, kituo, platypus.
* | Merge branch 'hdf5_1_8' of ↵lrknox2017-05-162-74/+74
|\ \ | |/ | | | | https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_8
| * Increment snap version.hdftest2017-05-162-74/+74
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* | Change copyright headers to replace url referring to file to belrknox2017-05-16119-714/+476
|/ | | | removed and replace it with new url for COPYING file.
* Snapshot 1.8.19-snap3hdftest2017-05-152-74/+74
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* Adds a new H5DO HL test that ensures chunk overwrites work properly.Dana Robinson2017-05-121-12/+125
| | | | Part of HDFFV-10187.
* Windows does not know what a uint isAllen Byrne2017-05-111-88/+88
| | | Index value used in math operation with hsize_t
* Merge pull request #485 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:hdf5_1_8 to ↵Vailin Choi2017-05-112-297/+776
|\ | | | | | | | | | | | | | | hdf5_1_8 * commit '8c2d4c354413d4f3578aa30cf28ee4c4f5c137cf': Incorporate additional code changes for the H5DOread_chunk patch from GE healthcare (HDFFV-9934) Modifications made based on pull request (#485) comments. Incorporate additional code changes for the H5DOread_chunk patch from GE healthcare (HDFFV-9934) Incorporate the code changes that were missing from the original patch: (1) Additional tests in hl/test/test_dset_opt.c (2) Fix in src/H5Dchunk.c for direct access when an entry is in chunk cache but not dirty Tested on playtpus, ostrich, kituo, mayll, osx1010test, quail, emu.
| * Incorporate additional code changes for the H5DOread_chunk patch from GE ↵Vailin Choi2017-05-111-61/+61
| | | | | | | | | | | | healthcare (HDFFV-9934) Modifications made based on pull request (#485) comments.
| * Incorporate additional code changes for the H5DOread_chunk patch from GE ↵Vailin Choi2017-05-032-268/+747
| | | | | | | | | | | | | | | | | | healthcare (HDFFV-9934) Incorporate the code changes that were missing from the original patch: (1) Additional tests in hl/test/test_dset_opt.c (2) Fix in src/H5Dchunk.c for direct access when an entry is in chunk cache but not dirty Tested on playtpus, ostrich, kituo, mayll, osx1010test, quail, emu.
* | Move libdynlib* test lib files from lib_LTLIBRARIES to dyn_LTLIBRARIESlrknox2017-05-1016-102/+144
|/ | | | | | and other changes to Makefiles and config/conclude.am to eliminate link errors with new libdynlib*_la_LDFLAGS which were added to stop libdynlib* files linking to external libraries.
* Ran bin/reconfigure on jam after changes to make_err.Dana Robinson2017-04-262-74/+74
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* HDFFV-10170 fix reconfigureAllen Byrne2017-04-182-74/+74
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_8)Allen Byrne2017-04-063-85/+459
|\ | | | | | | | | | | * commit '043aabe8cbd1abcc41ea2fb887b3a8ddd706500c': Made corrections according to code review. 1) Change fprintf to HDfprintf in hl/test/test_dset_opt.c 2) Remove extra line in src/H5Dpkg.h 3) Add one more test to hl/test/test_dset_opt.c Tested on mayll and osx1010test. Incorporate patch from GE Heathcare (HDFFV-9934) 1) Integrate the patch 2) Fix bugs when debugging the patch 3) Add test to hl/test/test_dset_opt.c Tested on moohan, ostrich, platypus, emu, osx1010test, quail, kituo, mayll.
| * Made corrections according to code review.Vailin Choi2017-04-032-29/+78
| | | | | | | | | | | | | | 1) Change fprintf to HDfprintf in hl/test/test_dset_opt.c 2) Remove extra line in src/H5Dpkg.h 3) Add one more test to hl/test/test_dset_opt.c Tested on mayll and osx1010test.
| * Incorporate patch from GE Heathcare (HDFFV-9934)Vailin Choi2017-04-033-73/+398
| | | | | | | | | | | | | | 1) Integrate the patch 2) Fix bugs when debugging the patch 3) Add test to hl/test/test_dset_opt.c Tested on moohan, ostrich, platypus, emu, osx1010test, quail, kituo, mayll.
* | Merge/port changes from develop back to 1.8 for tools and cmakeAllen Byrne2017-03-291-3/+3
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* Add option TEST_SHARED_PROGRAMS to disable shared testing by defaultAllen Byrne2017-03-011-1/+1
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* Delete files inadvertently checked in with version changes following ↵hdftest2017-02-222-0/+0
| | | | snapshot release. (Changed daily test command to add specific files for commit instead of all new and modified files.)
* Snapshot version 1.8 release 19 (snap1)HDF Tester2017-02-203-1/+2
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* Delete files inadvertently checked in with version changes following ↵hdftest2017-02-163-1/+1
| | | | | | snapshot release. Add 2 test files to testfiles to be removed list in hl/test/Makefile.am.
* Snapshot version 1.8 release 19 (snap0)HDF Tester2017-02-134-74/+74
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* HDFFV-9875 Bring changes from develop branchAllen Byrne2017-02-0619-70/+132
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* Update CMake required to version 3.2.2Allen Byrne2017-01-1814-14/+14
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* Change default build mode to production.lrknox2016-11-082-74/+74
| | | | Update version to 1.8.18-pre2.
* Update shared object file numbers according to changes in v1.8.18 release.lrknox2016-11-0116-260/+441
| | | | | Update autotools and libtool versions. Run bin/reconfigure.
* Updated release preparation branch version number to 1.8.18-pre1lrknox2016-10-272-74/+74
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* Description:Binh-Minh Ribler2016-10-261-1/+1
| | | | | | | User's sample code used "not" instead of "!" and Windows does not like that. Fixed. Platforms tested: Linux/32 2.6 (jam)
* Description:Binh-Minh Ribler2016-10-261-2/+6
| | | | | | | | | | | - In the test for HDFFV-9758, a pragma pack(1) caused failure on Emu because Sparc cannot access misaligned data. Changed it to pack() to do the default alignment. - Added DOXYGEN_SHOULD_SKIP_THIS blocks to private elements to prevent warnings from doxygen. Platforms tested: SunOS 5.11 (emu) Linux/32 2.6 (jam)
* Description:Binh-Minh Ribler2016-10-241-194/+192
| | | | | | | | | | | | | | | | | | | | | - Merged my commits to develop that fixed HDFFV-9758: b3b7ae087edbc20891a088db2f4e4f83e186c8b0 14e308b2e6eada778818abf53949ceef0e7b2a34 - Merged a commit from trunk by Quincey: commit ec2fbe0883f9e76df60bcfbebbd4b6f62d5a09e6 Author: Quincey Koziol <koziol@hdfgroup.org> Date: Thu Jul 7 13:54:11 2016 -0500 [svn-r30158] Description: More warning cleanups. This brings us down to ~1300 warnings in 167 Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming) Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test)
* Purpose: Fixed Packet Table issuesBinh-Minh Ribler2016-10-244-91/+164
| | | | | | | | | | | | | | | | | | | | | | | Description: - Removed calls to H5Tget_native_type from PT APIs because it is up to the application, whether it wants the buffer to be read into memory in the machine’s native architecture. Currently, however, the PT doesn't allow an application to specify memory datatype. Perhaps, a new API can be added to provide that capability. - Added calls to H5Tcopy to H5PTcreate/H5PTcreate_fl/H5PTopen to save a copy of the application's datatype or the dataset's datatype. - Added various missing H5Tclose to the packet table tests, and various error checkings. Note: leave out changes to test_packet_vlen.c for this commit to wait on QAK about merging the commit ec2fbe0883f9e76df60bcfbebbd4b6f62d5a09e6 [svn-r30158] first. This commit is associated with develop's commits: 14e308b2e6eada778818abf53949ceef0e7b2a34 be613da6b804e56a51f43a053bf35d898dccb420 Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* Add missing EXPORT tag in install commandAllen Byrne2016-10-171-0/+2
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* Add namespace and export utilsAllen Byrne2016-10-144-1/+7
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* Correct usuage of cmake variableAllen Byrne2016-10-101-2/+2
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* Correct name of windows variableAllen Byrne2016-10-101-2/+2
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* [svn-r30171] HDFFV-9939: convert cmake copy commands to reduce issue with ↵Allen Byrne2016-07-124-155/+45
| | | | | | | too long command lines on some platforms. Also, refactor hl/tools/gif3h5 cmake files. JAVA-1920: add plugin test with plugin that depends on hdf5
* [svn-r30170] HDFFV-9946: condense cygwin autotools config files to a single ↵Allen Byrne2016-07-122-0/+105
| | | | file. Avoid getpwuid function for cygwin.
* [svn-r29804] Purpose: Code improvementBinh-Minh Ribler2016-04-263-14/+30
| | | | | | | | | | | | | | | Description: The constructor FL_PacketTable added in 1.10.0 did not have good prototype; it didn't allow the property list to be default. Marked it deprecated and added this one: FL_PacketTable(hid_t fileID, const char* name, hid_t dtypeID, hsize_t chunkSize = 0, hid_t plistID = H5P_DEFAULT); Merged from trunk r29803. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29801] Purpose: Fix memory leak - HDFFV-9700Binh-Minh Ribler2016-04-251-8/+2
| | | | | | | | | Description: Applied user's patch to fix memory leak. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29797] Purpose: Fix warnings HDFFV-8615Binh-Minh Ribler2016-04-251-3/+14
| | | | | | | | | | | | | Description: The "warning: deprecated conversion from string constant to âchar*â [-Wwrite-strings]" was already removed by adding const to char* parameter in the FL_PacketTable. This change is to remove the use of literal strings in code for maintainability. Merged from trunk r29786. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29734] Description:Binh-Minh Ribler2016-04-182-84/+84
| | | | | | | | | Merged from trunk: r29710: label "error:" vs. "out:" and static_cast Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29690] Purpose: Merge PT improvements from trunkBinh-Minh Ribler2016-04-1311-813/+2420
| | | | | | | | | | | | | | Description: Merged from trunk: r29269: Improve Packet Table library r29295: Replaced H5Acreate with H5Acreate2 (by Larry) r29360: Adding missing tests r29364: Improve C++ Packet Table library r29554: Removed extra line in Copyright Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29604] HDFFV-9746 Add test for "/" for H5LTpath_validScot Breitenfeld2016-04-011-0/+23
| | | | Tested: jam (gnu)
* [svn-r28438] Snapshot version 1.8 release 17 (snap6)HDF Tester2015-11-223-21/+21
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* [svn-r28274] Applied patch to eliminate warnings from PRINTSTREAM macros ↵Larry Knox2015-11-043-7/+7
| | | | | | | | from HDF5 1.8.16. Update supported platform and tested configuration info in RELEASE.txt. Tested with h5committest.new.
* [svn-r28125] Add library version changes based on lt_vers.am file.Allen Byrne2015-10-193-8/+8
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* [svn-r28121] Snapshot version 1.8 release 17 (snap1)HDF Tester2015-10-182-74/+74
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