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* 1 12 merge of changes from dev (#271)Allen Byrne2021-01-193-3/+3
| | | | | | | | | | | | | | | * OESS-98 fix tools test for plugins * sync fork * Merge of changes from dev * Move problem option to bottom of the list until fixed * HDFFV-11106 - fix parsing optional args * HDFFV-11106 add note * grammer fix
* 1 12 - Update pkgconfig settings with version - #218 (#221)Allen Byrne2020-12-223-6/+6
| | | | | | | | | | | | | | | | | | | | | * merge updates from develop * remove extension on command * Run autogen before chkmanifest * Update release text files and whitespace cleanup * Update list * OESS-98 Update plugin build option * OESS-98 fix tools test for plugins * Fix conflict * OESS-98 fix hdf5 link target * Update pkgconfig settings with version - #218
* OESS-98 Update plugin build option - HDF5 1 12 (#173)Allen Byrne2020-12-152-1/+48
| | | | | | | | | | | | | * merge updates from develop * remove extension on command * Run autogen before chkmanifest * Update release text files and whitespace cleanup * Update list * OESS-98 Update plugin build option
* Manual sync with develop (#95)Dana Robinson2020-11-171-33/+47
| | | | Brings all features from develop. Note that RELEASE.txt has not been updated (will be done in a future PR).
* OESS-98 add CMake option to build plugins project within hdf5Allen Byrne2020-10-169-24/+24
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* Merge changes from developAllen Byrne2020-10-0823-267/+169
| | | | | Comments and whitespace Skip file-locking and cache changes
* Merge from developAllen Byrne2020-10-074-3663/+3605
| | | | | | github workflow files parser files bin scripts doc corrections
* Cleanup comments in tests, align comments better, update vfd testAllen Byrne2020-10-051-5/+1
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* Source formattedAllen Byrne2020-10-0183-23039/+21391
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* Add clang-format changes from develop.Allen Byrne2020-09-2813-660/+816
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* Sync with developDana Robinson2020-08-0119-368/+433
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* CMake updates:Allen Byrne2020-07-151-1/+20
| | | | | | Add build folder as Include for generated files Add install option for copying Fortran mod files to include folder Add PRI defines to win32defs file Exclude mingw from extra flags
* Eliminate unneccesary creation of DXPLQuincey Koziol2020-06-051-14/+3
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* Whitespace cleanupAllen Byrne2020-05-1224-314/+312
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* Fix NoFilter buildAllen Byrne2020-04-261-1/+1
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* Fix shadowed typeAllen Byrne2020-04-131-3/+3
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* TRILAB-192 update LTparse filesAllen Byrne2020-04-073-663/+821
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* TRILAB-192 - merge changes from developAllen Byrne2020-04-079-105/+54
| | | | Single source, config files, for warnings for both autotools and CMake. Update CMake libraries, tools, tests to use correct flags.
* TRILAB-192 merging warnings changes from developAllen Byrne2020-03-302-0/+12
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* Merge changes from develop mostly cmake 3.12 minimum versionAllen Byrne2020-02-2315-15/+15
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* HDFFV-11012 fix fortran include propertiesAllen Byrne2020-02-051-2/+2
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* Merge changes from develop to fix various issuesAllen Byrne2020-01-302-20/+8
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* Merge pull request #2238 in HDFFV/hdf5 from ~KMU/hdf5:hdf5_1_12 to hdf5_1_12Kimmy Mu2020-01-241-1/+1
|\ | | | | | | | | | | | | * commit '48cc850199901c5b67a40183262f4ead975b884f': fix test assert fail error Merge pull request #2071 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/intel_warnings to develop Merge pull request #2234 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/intel_warnings to develop
| * Merge pull request #2071 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/intel_warnings ↵Kimmy Mu2020-01-081-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '0a2bb11b248df6841daabca3970df5d8504adfc7': address problems from comments fix and address comments change according to previous comments add missing piece remove unnecessary check macro fix intel compile warnings Revert "fix warnings from Intel compiler" Revert "fix warnings and some text alignment" Revert "let hdf5 pick up the right compiler in Intel environment" Revert "fix issues from previous PR comments" Revert "using a different MACRO" using a different MACRO fix issues from previous PR comments let hdf5 pick up the right compiler in Intel environment fix warnings and some text alignment fix warnings from Intel compiler
* | Improved CMake options for testsAllen Byrne2020-01-199-13/+21
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* | Squashed commit of the token_refactoring branch:Dana Robinson2020-01-192-64/+111
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* Cherry pick of 0225e6d5969Quincey Koziol2020-01-041-18/+18
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* In portable shell scripts (using #!/bin/sh) we have to use single squareDavid Young2019-12-191-1/+1
| | | | brackets, [ ], instead of the bash-ism double square brackets, [[ ]].
* Apparently, + has no special meaning, and neither does \+, in so-calledDavid Young2019-12-192-2/+2
| | | | | | | | "obsolete" / POSIX "basic" regular expressions. Also, not every version of `sed` out there supports the `-E` option. So delete the -E flag and use the regex `[^/][^/]*` instead of `[^/]+`. Add config/netbsd to the MANIFEST.
* Make these scripts relocatable again: derive a relative path for theDavid Young2019-12-192-2/+49
| | | | | | | original installation prefix from the examples prefix. Use that relative path to locate the current installation prefix, always. Fall back to an absolute installation prefix if the relative path cannot be derived.
* Let us override the examples directory using --with-examplesdir=DIR.David Young2019-12-196-9/+9
| | | | | | | | | This is handy for NetBSD where HDF5 examples are installed by convention in $prefix/share/examples/hdf5/ rather than in ${prefix}/share/hdf5_examples/, which is the HDF5 default. Place hdf5_examples/ under ${datarootdir} which on most systems will be ${prefix}/share/, anyway.
* Under the examples directories, always find the installed HDF5David Young2019-12-193-3/+3
| | | | | | | | | | executables and scripts using @prefix@ instead of a relative path, because the number of ../ in the relative path will be different on NetBSD than on other systems. Examples on NetBSD are installed at ${prefix}/share/examples/hdf5/ instead of at ${prefix}/share/hdf5_examples/, by convention. It may be the same on other BSDs, I'm not sure.
* Change defines to not conflict with windowsAllen Byrne2019-12-118-180/+187
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* Correct assignmentAllen Byrne2019-12-101-1/+1
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* Fix h5watch faultAllen Byrne2019-12-101-10/+11
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* HDFFV-10876 Merge from developAllen Byrne2019-12-091-70/+70
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* Revert "Merge branch 'hdf5_1_12' of ↵Jerome Soumagne2019-12-098-64/+13
| | | | | | | https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into hdf5_1_12" This reverts commit 9f9336a5bd541752f472bab4c93da8de89f862cd, reversing changes made to 437a1919e7ba60fe75a33a466d264183a0255319.
* Merged HDFFV-10929_2GB_testing to hdf5_1_12Richard Warren2019-12-068-13/+64
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* Make wrappers, tests and tools use H5Treclaim() instead of H5Dvlen_reclaim()Jerome Soumagne2019-10-082-9/+9
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* OESS-29 Update HD prefix mostlyAllen Byrne2019-08-245-83/+83
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* This test cannot use HD prefix macro with printf of fprintfAllen Byrne2019-08-171-2/+2
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* Update HD prefix and reconcile hl/cpp testAllen Byrne2019-08-1613-1215/+1223
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* Add HD prefix to testsAllen Byrne2019-08-154-120/+118
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* Merge pull request #1826 in HDFFV/hdf5 from ↵Dana Robinson2019-08-013-4/+3
|\ | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:develop_minor_pr to develop * commit '4227b8948d7091205b4f8dc1271d7dcae01bb0fb': Reverts the removal of config/conclude_fc.am while keeping the changes to config/gnu-fflags. Fixed a couple of typos.
| * Reverts the removal of config/conclude_fc.am while keepingDana Robinson2019-08-013-4/+3
| | | | | | | | the changes to config/gnu-fflags.
* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2019-07-293-3/+4
|\ \ | |/ | | | | | | | | | | | | * commit 'd169391529f253a9903b8e6cacf38c59ceefab07': Parallel Fortran tests now use the MPI module instead of including mpif.h. First stab at gfortran versions. Tested on gfortran 7-9 so far. Moved the -std=f2008 option to gfortran 9 for now. Updated gfortran options. * Removed conclude_fc.am, which was causing verbose builds. Need to investigate more, though. * Added gfortran 9 warnings and flags. This will need to be separated into other version blocks based on when the options first appeared. * The standard is now explicitly set at 2008.
| * Merge pull request #1808 in HDFFV/hdf5 from ↵Dana Robinson2019-07-293-3/+4
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:gnu-flags-work to develop * commit '7d291d059da6287f769951c4854c566da0b93ce8': Parallel Fortran tests now use the MPI module instead of including mpif.h. First stab at gfortran versions. Tested on gfortran 7-9 so far. Moved the -std=f2008 option to gfortran 9 for now. Updated gfortran options. * Removed conclude_fc.am, which was causing verbose builds. Need to investigate more, though. * Added gfortran 9 warnings and flags. This will need to be separated into other version blocks based on when the options first appeared. * The standard is now explicitly set at 2008.
| | * Updated gfortran options.Dana Robinson2019-07-173-3/+4
| | | | | | | | | | | | | | | | | | | | | | | | * Removed conclude_fc.am, which was causing verbose builds. Need to investigate more, though. * Added gfortran 9 warnings and flags. This will need to be separated into other version blocks based on when the options first appeared. * The standard is now explicitly set at 2008.
* | | Correct generator and add HD prefixAllen Byrne2019-07-261-3/+3
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* | | HDFFV-10529 Update CMake tests to use test fixturesAllen Byrne2019-07-238-102/+134
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