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* Reinstate java API removed in 1.10.8 (#1697)Allen Byrne2022-04-293-5/+108
| | | | | | | * Revert java API removal with JNI private function * Fix name typo * Correct format
* Add java to format source (#1690)Allen Byrne2022-04-2655-3245/+3655
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* Hdf5 1 10 merges (#1633)jhendersonHDF2022-04-141-16/+3
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* Merge various cleanup java test, test files, comments (#1364)Allen Byrne2022-01-194-17/+17
| | | Plus some spelling corrections
* Merge Update the java slf4j logging jars to latest 1.7.33 (#1371)Allen Byrne2022-01-141-1/+1
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* 1.10 Merge Add javadoc to packages - HDFFV-11285 (#1199)Allen Byrne2021-11-206-9/+278
| | | | | * Merge Add javadoc to packages - HDFFV-11285 * Correct list
* Merge Correct java exception declarations #1121 (#1123)Allen Byrne2021-10-251-6/+9
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* 1.10 Merge Add missing dataset reference text #1081 (#1083)Allen Byrne2021-10-092-13/+46
| | | | | * Merge Add missing dataset reference text #1081 * Only print name if not printing data
* Update version to 1.10.9-1. (#1069)Larry Knox2021-10-031-2/+2
| | | Clear 1.10.8 entries out of RELEASE.txt.
* Fix javadoc and java warnings (#1011)Allen Byrne2021-09-163-46/+461
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* Update copyright headers with reproduction notice in 5 files (#993) (#1002)Larry Knox2021-09-092-16/+14
| | | | | | | | | | | * Update copyright headers with reproduction notice in 5 files that did not match terms in COPYING file . * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* 1.10 merge clang tidy of examples and hl (#966)Allen Byrne2021-08-251-2/+1
| | | | | | | * Merge of clang tidy of examples and hl from 1.12 * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Hdf5 1 10 merge of printf specifiers and VS2015 min changes (#612)Allen Byrne2021-04-301-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder * Merges from develop #358 patches from vtk #361 fix header guard spelling * Merge updates #358 patches from vtk #361 fix header guard spelling * format fix * Fix missing underscore and make H5public.h closer to dev * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings header guard underscore cleanup JNI cleanup * format alignment * Add missing test ref file * Merge #380 from develop * Finish java merges from develop * Fix java issues with tests and javadoc * Correct use of attribute access plist * Remove debug code * Remove unused variable * Change file access to read only for java tests * Split clang format operations. * More javadoc comments * Remove pre-split setting * format source * Change windows TS to use older VS. * Mostly all javadoc fixes, one argument rename. * synch file * Merge of long double fix and compiler flags * HDFFV-11229 merge changes from develop * HDFFV-11229 correct test script * HDFFV-11229 update autotools test script for two ref files * HDFFV-11229 merge dev changes for long double display in tools * Committing clang-format changes * minor whitespace * remove unneeded macro * Committing clang-format changes * Add "option" command for clang options * Rework CMake add_custom to use the BYPRODUCTS argument Update pkgconfig scripts for parallel builds. Fix install COPYING file reference. Remove unused round defines. Change CMake default setting of BUILD_CPP to off. * Fortran target depends * Remove incorrect source attribute * Revert define removal * printf specifiers and VS2015 min changes * Committing clang-format changes * Add time struct Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Hdf5 merge issue 487 v110 (#533)Larry Knox2021-04-011-2/+8
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Cleans up a couple of MSVC warnings in testhdf5 (#475) * Fixes a few testhdf5 warnings raised in Visual Studio Visual Studio is grumpier about treating pointers like integers than gcc. * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Fix typos and grammar errors. (#476) * Suppresses the tcheck_version test's abort dialog on Windows (#477) * Suppresses the tcheck_version test's abort dialog on Windows Windows raises a modal abort/retry/ignore dialog box when CRT calls abort(). This change installs a report hook that suppresses the dialog so that the CMake tests don't time out waiting for a nonexistent user to click a dialog box. * Committing clang-format changes * Removes __cdecl from callback Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Committing clang-format changes Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org>
* 1 10 - Mostly all javadoc warning fixes (#508)Allen Byrne2021-03-2513-57/+387
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder * Merges from develop #358 patches from vtk #361 fix header guard spelling * Merge updates #358 patches from vtk #361 fix header guard spelling * format fix * Fix missing underscore and make H5public.h closer to dev * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings header guard underscore cleanup JNI cleanup * format alignment * Add missing test ref file * Merge #380 from develop * Finish java merges from develop * Fix java issues with tests and javadoc * Correct use of attribute access plist * Remove debug code * Remove unused variable * Change file access to read only for java tests * Split clang format operations. * More javadoc comments * Remove pre-split setting * format source * Change windows TS to use older VS. * Mostly all javadoc fixes, one argument rename. * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* 1 10 Fix java data export functions (#450)Allen Byrne2021-03-109-340/+457
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder * Merges from develop #358 patches from vtk #361 fix header guard spelling * Merge updates #358 patches from vtk #361 fix header guard spelling * format fix * Fix missing underscore and make H5public.h closer to dev * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings header guard underscore cleanup JNI cleanup * format alignment * Add missing test ref file * Merge #380 from develop * Finish java merges from develop * Fix java issues with tests and javadoc * Correct use of attribute access plist * Remove debug code * Remove unused variable * Change file access to read only for java tests * Split clang format operations. * More javadoc comments * Remove pre-split setting * format source
* 1 10 Merges from develop (#424)Allen Byrne2021-03-0436-413/+321
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder * Merges from develop #358 patches from vtk #361 fix header guard spelling * Merge updates #358 patches from vtk #361 fix header guard spelling * format fix * Fix missing underscore and make H5public.h closer to dev * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings header guard underscore cleanup JNI cleanup * format alignment * Add missing test ref file
* 1 10 merge java copyright header changes (#392)Allen Byrne2021-03-0188-88/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder
* Hdf5 1 10 update license url part2 (#404)Larry Knox2021-03-01132-132/+132
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * close #195. (#196) * Update HDF5PluginMacros.cmake * Update HDF5PluginMacros.cmake * Modify temporary rpath for testing in java example scripts. (#230) * Fix undefined left shifting of negative numbers (#338) Undefined Bahavior Sanitizer errored here about left shifting negative numbers. * Update license url (#332) * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING file - src and test directories. * Update license url part2 (#333) * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING file - files not in src or test. * Update URL in source file Copyright headers for web. Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org> Co-authored-by: Sean McBride <sean@rogue-research.com>
* 1 10 Whitespace changes after clang-format run (#287)Allen Byrne2021-01-291-2/+2
| | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes
* HDFFV-10865 - merge from dev, HDFArray perf fix. (#234)Allen Byrne2020-12-291-184/+120
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* HDFFV-10868 merge java changes from developAllen Byrne2020-11-0345-328/+4530
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* OESS-98 add CMake option to build plugins project within hdf5Allen Byrne2020-10-161-1/+1
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* Source formattedAllen Byrne2020-10-0158-6178/+6861
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* Merge of clang-format changes from developAllen Byrne2020-09-303-8/+15
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* Updated HDF5 1.10 support branch version number to 1.10.8-0Larry Knox2020-08-191-2/+2
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* Fix javadoc warningAllen Byrne2020-08-161-0/+4
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* Brings file locking changes from developDana Robinson2020-08-143-0/+144
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* Correct arg referencesAllen Byrne2020-06-221-3/+3
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* HDFFV-11111 correct ifdef logicAllen Byrne2020-06-181-2/+2
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* HDFFV-11111 add unimplemented errors in JNIAllen Byrne2020-06-182-0/+31
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* Removed trailing whitespace from source files.Dana Robinson2020-05-262-2/+2
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* Add github actions file and cleanup javaAllen Byrne2020-05-062-2/+2
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* TRILAB-192 - merge changes from developAllen Byrne2020-04-071-3/+1
| | | | Single source, config files, for warnings for both autotools and CMake. Update CMake libraries, tools, tests to use correct flags.
* Correct cb object nameAllen Byrne2020-03-301-1/+1
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* TRILAB-192 merging warnings changes from developAllen Byrne2020-03-305-39/+23
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* Merge CMake and tools changes from developAllen Byrne2020-02-2730-545/+568
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* Update version for HDF5_1_10Larry Knox2019-12-111-2/+2
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* Add missing include folderAllen Byrne2019-12-101-1/+1
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* HDFFV-10903 merge updated changesAllen Byrne2019-09-172-6/+14
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* Merge S3 code from develop to 1.10Allen Byrne2019-09-1310-0/+623
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* HDFFV-10887 merge from developAllen Byrne2019-08-203-4/+90
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* HDFFV-10845, 10529 and CMake changes from developAllen Byrne2019-07-241-2/+2
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* HDFFV-10805 Merge SHARED ONLY option from developAllen Byrne2019-06-202-2/+2
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* Updates from developAllen Byrne2019-06-101-1/+1
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* Update cmake macros and java arg formatAllen Byrne2019-05-316-79/+79
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* Fix Java JUnit-TestH5P failure on 32-bit archJordan Henderson2019-04-301-1/+1
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* Fix typosAllen Byrne2019-02-261-0/+4
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* Minor fix in h5str_sprintf for NULL region referencesJordan Henderson2019-02-223-3/+3
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* Update version on hdf5_1_10 branch to 1.10.6-snap0.Larry Knox2019-02-181-2/+2
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