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* Merge/update CMake, presets,java and tools (#3393)Allen Byrne2023-08-211-3/+3
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* Hdf5 1 12 sync (#1794)Allen Byrne2022-06-121-4/+9
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* Merge Update the java slf4j logging jars to latest 1.7.33 (#1370)Allen Byrne2022-01-241-3/+3
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* 1.12 Merge Add tests for H5Ocopy of new object refs (#1339)Allen Byrne2022-01-141-0/+22
| | | | | | | | | | | | | * Add tests for H5Ocopy of new object refs * Correct class name * Skip test because of issue with debug assertions * Update reference file * Fix object examples for new refs and spelling fixs * Fix ref try-catch blocks
* 1 12 merge CMake flag groups and tools long double changes from develop (#523)Allen Byrne2021-04-191-0/+46
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * OESS-98 fix tools test for plugins * sync fork * Merge of changes from dev * Move problem option to bottom of the list until fixed * HDFFV-11106 - fix parsing optional args * HDFFV-11106 add note * grammer fix * Whitespace after clang formatting * Undo format version 11 changes * Update check to working version * Merge workflow and minor changes from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge serval small changes from dev * fix typo * Minor non-space formatting changes * GH #386 copyright corrections for java folder * revert because logic requires false return * Merges from develop #358 patches from vtk #361 fix header guard spelling * Remove case statement for H5I_EVENTSET * Correct call with versioning * Remove tabs * Double underscore change * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings Remove more underscores from header guards * Merge #380 from develop * Correct date entry * Split format source and commit changes on repo push * remove pre-split setting * Change windows TS to use older VS. * HDFFV-11212 JNI export util and Javadoc * Suggested review changes * Another change found * Committing clang-format changes * Some Javadoc warning fixes * Committing clang-format changes * Updated javadoc fixes * HDFFV-11228/9 merges from develop * remove obsolete debug comment * Fix conflict * HDFFV-11229 merge changes from develop * HDFFV-11229 merge second compare from develop * HDFFV-11229 fix reference file * HDFFV-11229 update autotools test script for two ref files * HDFFV-11229 merge dev changes for long double display in tools * Committing clang-format changes * Update with changes from develop Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* 1 12 JNI export references and java updates (#464)Allen Byrne2021-03-121-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * OESS-98 fix tools test for plugins * sync fork * Merge of changes from dev * Move problem option to bottom of the list until fixed * HDFFV-11106 - fix parsing optional args * HDFFV-11106 add note * grammer fix * Whitespace after clang formatting * Undo format version 11 changes * Update check to working version * Merge workflow and minor changes from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge serval small changes from dev * fix typo * Minor non-space formatting changes * GH #386 copyright corrections for java folder * revert because logic requires false return * Merges from develop #358 patches from vtk #361 fix header guard spelling * Remove case statement for H5I_EVENTSET * Correct call with versioning * Remove tabs * Double underscore change * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings Remove more underscores from header guards * Merge #380 from develop * Correct date entry * Split format source and commit changes on repo push * remove pre-split setting * Change windows TS to use older VS. * HDFFV-11212 JNI export util and Javadoc * Suggested review changes * Another change found * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* 1 12 merge java copyright header changes (#391)Allen Byrne2021-03-011-2/+27
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * OESS-98 fix tools test for plugins * sync fork * Merge of changes from dev * Move problem option to bottom of the list until fixed * HDFFV-11106 - fix parsing optional args * HDFFV-11106 add note * grammer fix * Whitespace after clang formatting * Undo format version 11 changes * Update check to working version * Merge workflow and minor changes from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge serval small changes from dev * fix typo * Minor non-space formatting changes * GH #386 copyright corrections for java folder * revert because logic requires false return
* Update URL in source file Copyright headers for web copy of COPYINGLarry Knox2021-02-201-1/+1
| | | | file - files not in src or test.
* Change load path in libhdf5_java.dylib to unversioned libhdf5.dylib forLarry Knox2020-07-071-1/+1
| | | | junit tests on Macs.
* Merge pull request #2667 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2020-07-071-6/+2
| | | | | * commit '32c483cb86031962a09ecdb49dcb331d28dddee9': Copy lib files for junit.sh to temporary subdirectory of <build directory>/java/test instead of to the prefix/lib directory. Fix for HDFFV-11063.
* Merge pull request #2670 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2020-07-061-0/+8
| | | | | * commit 'fc69de0e8ae30e80c1c3c542b156226a75444525': Lib files needed are now copied to a subdirectory in the java/test directory, and on Macs the loader path for libhdf5.xxxs.so is changed in the temporary copy of libhdf5_java.dylib. Fix for HDFFV-11063
* Merge tools changes from developAllen Byrne2020-01-131-39/+39
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* Update junit.sh.in to copy lib files to $prefix/lib.Larry Knox2019-08-021-3/+4
| | | | Correct checking for s3 and hdfs options.
* Squashed commit of the following:Larry Knox2019-07-251-0/+48
| | | | | | | | | | | Merge changes from update_merged_S3_HDFS branch into develop. commit d5034315aea88629929ac0c9c59ebfafd5f21a31 Merge: 9c48823 d3fdcd8 Author: Larry Knox <lrknox@hdfgroup.org> Date: Thu Jul 25 08:24:53 2019 -0500 Merge branch 'develop' into update_merged_S3_HDFS
* Fix regexAllen Byrne2019-01-091-37/+37
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* Correct regex optionAllen Byrne2019-01-081-37/+37
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* HDFFV-10674 handle time as natural numberAllen Byrne2019-01-071-37/+37
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* Add reference file to listAllen Byrne2018-12-211-0/+1
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* HDFFV-10664 Add new functions and constants to java interfaceAllen Byrne2018-12-191-0/+21
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* Updated the Java tests so that they don't fail when theDana Robinson2018-11-121-45/+40
| | | | error stack changes.
* Correct name of test jarAllen Byrne2018-08-231-2/+2
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* Only remove test jarsAllen Byrne2018-08-231-4/+33
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* Remove obsolete varAllen Byrne2018-08-231-1/+1
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* DT location incorrectAllen Byrne2018-08-231-75/+74
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* Add installib path to test commandAllen Byrne2018-08-211-72/+72
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* Fix OSX SIP for libsAllen Byrne2018-08-211-8/+4
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* Add actual file names fo diffAllen Byrne2018-06-291-1/+71
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* Update Java util lib, Refactor H5D write VL to match readAllen Byrne2018-06-271-3/+5
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* Correct script namesAllen Byrne2018-05-241-2/+2
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* HDFFV-9739 only executes H5E tests in productionAllen Byrne2018-05-231-38/+39
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* HDFFV-9739 dup test file for concurrent testsAllen Byrne2018-05-201-1/+5
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* HDFFV-9739 Fix autotools scriptAllen Byrne2018-05-201-65/+389
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* HDFFV-9739 Change autotools test scriptsAllen Byrne2018-05-181-30/+399
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* Fix Java test for DEBUG_APISAllen Byrne2018-04-091-4/+4
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* Add chklog and chexe generation to Java autootools testsAllen Byrne2017-09-191-2/+6
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* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* tools/test/h5diff/testh5diff.sh.in:lrknox2017-01-131-0/+9
| | | | | | | | | | | | | | | | | Add code to delete copies of test .h5 files copied from tools/testfiles/vds to tools/test/h5diff/testfiles when running "make check" for an in-source build. tools/test/misc/testh5repart.sh.in: Change the name of the temporary test directory from "testfiles" which is also used for 2 h5mkgrp test files under source control to "testrepart" to avoid deleting source controlled files when running "make check" in the source directory. Fix test scripts that remove source-controlled files during "make check" when run in-source. Fix test scripts that don't remove test files because they add files to test directories but don't remove them if the build directories are the same as the source directory. Fix any test source file or Makefile.am files for tests that leave data files are removed by neither "make check" nor "make distclean".
* Add missing characterAllen Byrne2016-12-011-1/+1
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* Change where test copies libs because of osx1011 SIPAllen Byrne2016-12-011-4/+31
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* [svn-r30235] HDFFV-9730: Fix functions for delete to use a specific dir ↵Allen Byrne2016-08-011-1/+1
| | | | instead of a possibly uninitialized variable.
* [svn-r29601] Cleanup case of CMake commands in tools.Allen Byrne2016-03-311-6/+14
| | | | | Update CTestCustom file for new tests. Add connection from HDF5_ENABLE_USING_MEMCHECKER cmake option to library define USING_MEMCHECKER.
* [svn-r29520] rename java test file because test modifies original file.Allen Byrne2016-03-221-14/+7
| | | | Delete copy when test is finished.
* [svn-r29507] Add actual file name to delete functions to prevent accidental ↵Allen Byrne2016-03-221-2/+2
| | | | | | deletion of source files. (HDFFV-9730 created for tools scripts, which is the basis for the java scripts)
* [svn-r29480] Correct copy functions to test the directoryAllen Byrne2016-03-211-4/+4
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* [svn-r29450] Separate error compare from output compareAllen Byrne2016-03-161-1/+0
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* [svn-r29435] Remove char from var name.Allen Byrne2016-03-151-1/+2
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* [svn-r29418] Add compare to expected to script to verify correct operation ↵Allen Byrne2016-03-151-1/+29
| | | | of test
* [svn-r29226] HDFFV-9552: merge in java code.Allen Byrne2016-02-291-0/+234
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