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* Merge/update CMake, presets,java and tools (#3393)Allen Byrne2023-08-212-4/+9
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* Revert "1.12 eliminate unnecessary errors in the error stack (#1880)" (#1935)Larry Knox2022-07-263-4/+8
| | | This reverts commit f6997681335f0b5fe2e8904f9108a71c5200fb2d.
* 1.12 eliminate unnecessary errors in the error stack (#1880)Allen Byrne2022-07-183-8/+4
| | | | | | | | | | | * Eliminate unnecessary error output * Fix merge typo * fix format * Fix object address to tokens * Fix conflict
* 1.12 HDFFV-11310 implement JNI VL support for primitive types (#1856)Allen Byrne2022-07-123-4/+8
| | | | | | | | | | | | | | | * HDFFV-11310 - implement VL read/write using List of Lists * Fix function name typo * Add JIRA issue * Correct note to match change in code. * HDFFV-11318 add VL references as byte arrays * Fix unreleased allocations * Fix format
* 1.12 Merge Add tests for H5Ocopy of new object refs (#1339)Allen Byrne2022-01-142-1/+12
| | | | | | | | | | | | | * Add tests for H5Ocopy of new object refs * Correct class name * Skip test because of issue with debug assertions * Update reference file * Fix object examples for new refs and spelling fixs * Fix ref try-catch blocks
* 1 12 merge CMake flag groups and tools long double changes from develop (#523)Allen Byrne2021-04-192-0/+26
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * OESS-98 fix tools test for plugins * sync fork * Merge of changes from dev * Move problem option to bottom of the list until fixed * HDFFV-11106 - fix parsing optional args * HDFFV-11106 add note * grammer fix * Whitespace after clang formatting * Undo format version 11 changes * Update check to working version * Merge workflow and minor changes from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge serval small changes from dev * fix typo * Minor non-space formatting changes * GH #386 copyright corrections for java folder * revert because logic requires false return * Merges from develop #358 patches from vtk #361 fix header guard spelling * Remove case statement for H5I_EVENTSET * Correct call with versioning * Remove tabs * Double underscore change * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings Remove more underscores from header guards * Merge #380 from develop * Correct date entry * Split format source and commit changes on repo push * remove pre-split setting * Change windows TS to use older VS. * HDFFV-11212 JNI export util and Javadoc * Suggested review changes * Another change found * Committing clang-format changes * Some Javadoc warning fixes * Committing clang-format changes * Updated javadoc fixes * HDFFV-11228/9 merges from develop * remove obsolete debug comment * Fix conflict * HDFFV-11229 merge changes from develop * HDFFV-11229 merge second compare from develop * HDFFV-11229 fix reference file * HDFFV-11229 update autotools test script for two ref files * HDFFV-11229 merge dev changes for long double display in tools * Committing clang-format changes * Update with changes from develop Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* 1 12 JNI export references and java updates (#464)Allen Byrne2021-03-121-1/+3
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * OESS-98 fix tools test for plugins * sync fork * Merge of changes from dev * Move problem option to bottom of the list until fixed * HDFFV-11106 - fix parsing optional args * HDFFV-11106 add note * grammer fix * Whitespace after clang formatting * Undo format version 11 changes * Update check to working version * Merge workflow and minor changes from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge serval small changes from dev * fix typo * Minor non-space formatting changes * GH #386 copyright corrections for java folder * revert because logic requires false return * Merges from develop #358 patches from vtk #361 fix header guard spelling * Remove case statement for H5I_EVENTSET * Correct call with versioning * Remove tabs * Double underscore change * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings Remove more underscores from header guards * Merge #380 from develop * Correct date entry * Split format source and commit changes on repo push * remove pre-split setting * Change windows TS to use older VS. * HDFFV-11212 JNI export util and Javadoc * Suggested review changes * Another change found * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* 1 12 merge java copyright header changes (#391)Allen Byrne2021-03-012-1/+13
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * OESS-98 fix tools test for plugins * sync fork * Merge of changes from dev * Move problem option to bottom of the list until fixed * HDFFV-11106 - fix parsing optional args * HDFFV-11106 add note * grammer fix * Whitespace after clang formatting * Undo format version 11 changes * Update check to working version * Merge workflow and minor changes from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge serval small changes from dev * fix typo * Minor non-space formatting changes * GH #386 copyright corrections for java folder * revert because logic requires false return
* Manual sync with develop (#95)Dana Robinson2020-11-171-1/+2
| | | | Brings all features from develop. Note that RELEASE.txt has not been updated (will be done in a future PR).
* HDFFV-10868 merge from developAllen Byrne2020-10-281-1/+15
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* Introduce new H5VL _by_value routinesJordan Henderson2020-01-291-1/+2
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* Squashed commit of the token_refactoring branch:Dana Robinson2020-01-194-51/+27
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* HDFFV-10876 Merge from developAllen Byrne2019-12-092-19/+25
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* Fix various Java issues when deprecated symbols are disabledJordan Henderson2019-10-102-4/+4
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* HDFFV-10887 Implement requested functionsAllen Byrne2019-08-192-2/+6
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* Squashed commit of the following:Larry Knox2019-07-252-0/+19
| | | | | | | | | | | Merge changes from update_merged_S3_HDFS branch into develop. commit d5034315aea88629929ac0c9c59ebfafd5f21a31 Merge: 9c48823 d3fdcd8 Author: Larry Knox <lrknox@hdfgroup.org> Date: Thu Jul 25 08:24:53 2019 -0500 Merge branch 'develop' into update_merged_S3_HDFS
* Fix java for new H5Fget_info functionAllen Byrne2019-04-151-2/+2
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* Add C++, Java, and FORTRAN wrappers and tests for H5Fget_filenoQuincey Koziol2019-04-141-1/+3
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* Re-write of Java JNI error handlingJordan Henderson2019-02-111-1/+2
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* Fix deprecated H5Pget_versionAllen Byrne2019-01-091-3/+1
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* HDFFV-10664 update reference fileAllen Byrne2019-01-041-3/+1
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* HDFFV-10664 update reference filesAllen Byrne2019-01-041-2/+1
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* HDFFV-10664 minimized dataset headers for java interfaceAllen Byrne2018-12-312-2/+4
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* HDFFV-10664 Add new functions and constants to java interfaceAllen Byrne2018-12-191-0/+11
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* HDFFV-10663 add new function H5Fis_accessibleAllen Byrne2018-12-172-2/+4
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* HDFVIEW-4 add datatype read to H5A like H5DAllen Byrne2018-12-101-10/+16
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* VOL FEATUREDana Robinson2018-10-101-16/+34
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* Removed 'VOL' versions of FUNC_ENTER macros as well as empty functionsDana Robinson2018-09-181-10/+4
| | | | orginally intended to support the full SWMR feature.
* Revert "Merge pull request #1116 in HDFFV/hdf5 from ↵hdftest2018-06-241-1/+1
| | | | | | | ~HDFTEST/hdf5_hft:hdf5_1_10 to develop" This reverts commit e9f476dad47ce593f13dacb77b1cc664d1f24e7b, reversing changes made to 2ff00b1b937ebe36ac6ddf590c16a4c27fc0b053.
* Merge branch 'hdf5_1_10' into hdf5_1_10.syncM. Scot Breitenfeld2018-05-221-1/+1
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| * HDFFV-9739 and cmake improvements merge from developAllen Byrne2018-05-2236-0/+881
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* HDFFV-9739 Update test referenceAllen Byrne2018-05-161-0/+1
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* HDFFV-9739 factor out tests into separate JUnitAllen Byrne2018-05-1536-0/+886
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