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* HDFFV-10996 - add java vol testsAllen Byrne2020-02-032-0/+84
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* Small fixes for tools and skip autotools tests for no filterAllen Byrne2020-01-291-20/+24
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* Merge pull request #2318 in HDFFV/hdf5 from ↵David Young2020-01-293-30/+29
|\ | | | | | | | | | | | | ~DYOUNG/werror:reduce-werror-diffs-1 to develop * commit 'fa1b2f6ef35c459c9f74ead885c119ae7f61c056': Reduce differences between my -Werror branch and `develop`:
| * Reduce differences between my -Werror branch and `develop`:David Young2020-01-293-30/+29
| | | | | | | | | | | | | | | | Rename index -> idx, fileno -> fnumber, fileno -> fno to avoid GCC shadowed declaration warnings about index(3). Convert #pragma GCC diagnostic push/pop/ignored to the HDF5 library's H5_GCC_DIAG_OFF()/H5_GCC_DIAG_ON() macros.
* | Merge pull request #2320 in HDFFV/hdf5 from ↵David Young2020-01-291-8/+8
|\ \ | | | | | | | | | | | | | | | | | | ~DYOUNG/werror:reduce-werror-diffs-2 to develop * commit 'a5f236e83bdd29e660a55c5577a69a3809605cda': Reduce casts of HDcalloc()/HDmalloc() that -Wc++-compat required.
| * | Reduce casts of HDcalloc()/HDmalloc() that -Wc++-compat required.David Young2020-01-291-8/+8
| |/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Reduce gratuitous casts---e.g., (size_t)1. Use the right format string for a pointer. In the H5C sanity checks, change a "size increase" variable from ssize_t (too narrow) to int64_t (wide enough). Parenthesize every appearance of `storage` in the macro `H5D_CHUNK_STORAGE_INDEX_CHK(storage)` so that you can pass in an expression like &sc and it works properly. Disallow re-assignment of the `dset` parameter to H5D__chunk_init() because it helped assure me that it's safe to replace the repeating expression `&dset->shared->layout.storage.u.chunk` with `sc` throughout. Replace lengthy expressions such as `&dset->shared->layout.storage.u.chunk` with `sc` throughout several functions in H5Dchunk.c ISTR that the compiler warned that `sc` was declared but unused in a couple of functions, and then I found that `sc` could be used in many places. Maybe the disused `sc` appeared because a bunch of code was copied and pasted, I don't know. Anyway, it's a lot tighter code now that I use `sc`. In H5D__chunk_update_old_edge_chunks() and H5D__chunk_delete() I actually expand `sc` and another temporary variable, `pline`, because they're used only in !defined(NDEBUG) code. This squashes unused-variable warnings in the defined(NDEBUG) configuration. Don't drop the `volatile` qualification with a cast in tools/src/h5import/h5import.c.
* | Merge pull request #2321 in HDFFV/hdf5 from ↵David Young2020-01-291-2/+8
|\ \ | | | | | | | | | | | | | | | | | | ~DYOUNG/werror:reduce-werror-diffs-3 to develop * commit 'f19e06b59ee53f17465a7b5974c25c3245a40d9a': testpar/t_2Gio.c: Fix a typo that I think was introduced by a previous warnings PR. An array element was assigned to itself---shape[2]Â =Â shape[2];---instead of being assigned to chunk[2].
| * | testpar/t_2Gio.c: Fix a typo that I think was introduced by aDavid Young2020-01-291-2/+8
| |/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | previous warnings PR. An array element was assigned to itself---shape[2]Â =Â shape[2];---instead of being assigned to chunk[2]. fortran/src/H5Pf.c: move conditional compilation controlled by H5_NO_DEPRECATED_SYMBOLS outside of a function for readability. fortran/src/H5match_types.c: put a variable's declaration under the same conditional compilation (H5_FORTRAN_HAVE_C_LONG_DOUBLE) as its use. For now, skip compilation of some unused debug dump routines in the JNI. While I'm in the JNI, delete a set-but-unused variable. src/H5Z.c: condition a variable declaration on H5_NO_DEPRECATED_SYMBOLS so that it's not declared but unused or vice versa. test/cache_common.h: add an #include in to get some symbols we need to avoid implicit declaration warnings. test/dsets.c: use a more conventional conditional-compilation syntax. test/dt_arith.c, test/fillval.c: initialize a bunch of uninitialized variables before use. test/vfd.c: pass the expected type of `void **` to posix_memalign(3) instead of `int **`. testpar/t_bigio.c: explicitly compare with 0 instead of using ! when "equal to 0?" is the question not "is false?" Repair some indentation while I'm here. testpar/testpar.h: repair misaligned line-continuation backslashes in a macro that probably should be a function so that we don't have to fiddle with the line continuation to begin with. tools/src/h5repack/h5repack_main.c: fix some compiler fussing about enums. tools/test/perform/pio_engine.c: the compiler fusses if you cast a function call returning double directly to off_t. It's ok if you cast a variable that's a double to off_t, however. Write and use a new function, sqrto(), to avoid the cast warnings.
* | Introduce new H5VL _by_value routinesJordan Henderson2020-01-295-15/+100
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* Squashed commit of the token_refactoring branch:Dana Robinson2020-01-1658-1074/+1994
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* HDFFV-11001 need to qualify all by parallel or serial typesAllen Byrne2020-01-156-40/+42
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* HDFFV-11001 Add fine control over testingAllen Byrne2020-01-155-5/+5
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* HDFFV-10995 - add missing importAllen Byrne2020-01-082-0/+2
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* HDFFV-10995 - need to add importAllen Byrne2020-01-082-0/+2
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* HDFFV-10995 - Update all time instancesAllen Byrne2020-01-081-38/+38
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* HDFFV-10995 adjust testing to tolerate non-US localeAllen Byrne2020-01-083-3/+3
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* HDFFV-10976,-10980 Init obj_type before calling H5Rget_obj_type3Allen Byrne2019-12-202-2/+2
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* Fix java include, h5watch and remove clang tool.Allen Byrne2019-12-101-1/+1
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* Add H5Rdestroy calls to cleanupAllen Byrne2019-12-081-0/+3
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* Remove problem tests for nowAllen Byrne2019-12-081-202/+102
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* HDFFV-10876 ignore old reference API testsAllen Byrne2019-12-073-40/+26
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* Address compile warningsAllen Byrne2019-12-065-31/+30
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* Fix compile errors - mostly in jniAllen Byrne2019-12-063-32/+73
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* HDFFV-10876 Update dump to match DDL specAllen Byrne2019-12-052-4/+5
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* Update create callsAllen Byrne2019-12-041-11/+12
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* Update reference callsAllen Byrne2019-12-041-2/+2
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* Add missing javadoc for new argAllen Byrne2019-12-031-0/+6
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* Update reference files and fix int as stringAllen Byrne2019-12-033-12/+12
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* HDFFV-10876 Update h5dump and h5ls for new ref api.Allen Byrne2019-11-0716-144/+1800
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* Fix various Java issues when deprecated symbols are disabledJordan Henderson2019-10-1011-27/+131
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* Update versioning to next major versionAllen Byrne2019-09-252-0/+5
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* Update develop branch version to 1.13.0 after creation of hdf5_1_12Larry Knox2019-09-252-4/+4
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* Remove obsolete symbolAllen Byrne2019-09-201-14/+13
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* small syntax changesAllen Byrne2019-09-195-20/+21
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* Change unused variable to generic formAllen Byrne2019-09-191-1/+1
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* HDFFV-10903 - fix VFD constants in JNIAllen Byrne2019-09-171-2/+14
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* HDFFV-10901 add missing config optionsAllen Byrne2019-09-131-1/+0
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* revert as CHECK will first check for exceptionAllen Byrne2019-09-101-6/+6
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* Clear exception for getting JNI string to clear the exceptionAllen Byrne2019-09-101-6/+6
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* Add statement for label if code unimplementedAllen Byrne2019-09-051-0/+2
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* Fix unused varAllen Byrne2019-09-051-2/+6
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* Correct label and var namesAllen Byrne2019-09-051-14/+14
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* Add back missing java implementationAllen Byrne2019-09-056-119/+407
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* OESS-29 Fix HD prefix in perform and enable test compileAllen Byrne2019-08-271-3/+3
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* Untangle #ifdef mess in ROS3 code.Dana Robinson2019-08-201-1/+1
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* HDFFV-10887 Implement requested functionsAllen Byrne2019-08-197-6/+164
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* Fix compiler warnings with diabled ROS3 and HDFS VFDs.Jacob Smith2019-08-141-11/+3
| | | | | | Fix misuse of [HD]strncpy and [HD]snprintf. Minor formatting changes. Fix test cleanup issue with java groups example.
* Update junit.sh.in to copy lib files to $prefix/lib.Larry Knox2019-08-021-3/+4
| | | | Correct checking for s3 and hdfs options.
* Merge cleanup mostly whitespaceAllen Byrne2019-07-303-5/+1
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2019-07-2916-0/+710
|\ | | | | | | | | | | | | | | * commit 'f97e11e7635a0cd8728d4604ca5dceb3925ba44c': Update comment and check for strtoumax. Modify CMakeLists.txt file for renamed h5tools_test_utils files. Add HD to string functions. Switched strtoul to strtoumax in H5FDs3comms.c. Removed unused functions and variables in s3 and hdfs TestH5Pfapl*.java. Update Copyright headers. Squashed commit of the following:
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