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* VFD SWMR: sync with develop (#725)Dana Robinson2021-06-041-79/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Brings CMake updates from develop * Brings reduction in pedantic casts from develop * Purges UFAIL from the library (#637) * Committing clang-format changes * Purges UFAIL from the library * H5HL_insert change requested in PR Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Removes gratuitous (double)x.yF casts (#632) * Committing clang-format changes * Removes gratuitous (double)x.yF casts * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Committing clang-format changes * Cleans up a const warning left over from previous constification (#633) * Committing clang-format changes * Adds consts to a few global variables * Cleans up a const warning left over from previous constification Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Formatted source * Bring over some VOL registration changes * VOL cleanup * H5VL_request_status_t substitutions * H5F.c cleanup * Minor API tweaks from develop * Moves H5G package init/teardown to H5Gint.c * H5G cleanup * H5M cleanup * H5SM cleanup * H5T cleanup * H5R cleanup * H5Lpublic.h cleanup * H5L cleanup * H5O cleanup * H5A, H5CS, and H5AC cleanup * Moved H5A init/teardown code to H5Aint.c * Moves H5D I/O functions to H5D.c * H5D cleanup * Misc minor cleanup * H5P close cleanup * H5Tpublic.h cleanup * Fixes err_compat test * H5PLpublic.h cleanup * Updates H5Ppublic.h * H5Fpublic.h updates * H5A.c cleanup * Brings over H5Aexists and related changes * Brings CMake shell testing changes from develop * Close callback changes * H5R and H5Tcommit normalization * err_compat test works now * H5O tweaks * Updates VOL registration code * Brings over H5VL_create_object * H5Tconv.c reformatting * H5T.c tweaks * Brings datatype and reference updates from develop * Brings VOL plugin loading changes from develop * Brings event sets from develop * Brings async functions over * Tools changes * Brings over many tools changes from develop * Brings VOL flags from develop * Fixes h5dump double/float tests * Updates h5repack tests * Brings h5diff test changes from develop * Last h5dump changes * Brings test changes from develop * Committing clang-format changes * Tidied h5_testing() * Brings chunk iteration code + misc from develop * Updates vds test * Enables external link parallel test * Brings updated property lists from develop * H5G changes from develop * H5MF cleanup * Brings vfd_swmr test back into CMake * Updates threadsafe test * Updates plist test * Brings recent changes from develop * Require a C++11 compiler to build the C++ wrappers (#693) * Committing clang-format changes * Requires a C++11 compiler to build the C++ wrappers Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Fix H5FD_mpio_Debug="rw" can report MPI_count instead of bytes (#699) * Removes pre-C99 build and header cruft (#700) * Assumes ANSI C headers exist * Assumes stdbool.h, stdint.h, and inttypes.h are present * Assumes the C++ compiler can handle stdint.h * Removes all work-arounds for missing functionality, especially stdbool.h Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Updates release documents * Brings parallel changes from develop * Adds a VFD/parallel check program for the VFD SWMR shell test * Updates MANIFEST * Disable building VFD SWMR acceptance tests on CMake * Removes err.h from genall5.c * Partial cleanup of H5Cpkg.h * Fixes printf specifiers in H5Cdbg.c * Java and fortran cmake changes (#694) * OESS-98 convert plugin option to FetchContent, add tests * Fixes for pkcfg files because of plugin option * OESS-98 fix tools test for plugins * Keep doxygen comments under 100 chars long - format hint * Whitespace * HDFFV-11144 - Reclassify CMake messages * HDFFV-11099/11100 added help text * Reworked switch statement to compare string instead * Fix typo * Update CDash mode * Correct name of threadsafe * Correct option name * Undo accidental commit * Note LLVM 10 to 11 format default changes * Update format plugin * Undo clang-format version 11 changes * One more correction * Update supported platforms * Revert whitespace changes * Correct whitespace * Changes from PR#3 * HDFFV-11213 added option to control gcc10 warnings diagnostics * HDFFV-11212 Use the new references correctly in JNI utility and tests * format source * Fix typo * Add new test file * HDFFV-11212 - update test and remove unused arg * Minor non-space formatting changes * Use H5I_INVALID_ID instead of "-1" * source formatting * add missing testfile, update jni function * Undo commit of debug code * remove mislocated file * Fix h5repack test for handling of fapls and id close * Update h5diff test files usage text * HDFFV-11212 add new ref tests for JNI export dataset * src format update * Remove blank line typo * src format typo * long double requires %Lg * Another long double foramt specifer S.B. %Lg * issue with t128bit test * Windows issue with h5dump and type. * Fix review issues * refactor function nesting and fix error checks * format fixes * Remove untested functions and javadoc quiet comments * Restore TRY block. * Change string append errors to memory exception * revert to H5_JNI_FATAL_ERROR - support functions need work * Add assertion error for h5util functions * remove duplicate function * format fix * Revert HD function error handling * Update copyright comments * GH #386 java folder copyright corrections * Whitespace * GH #359 implement and fix tools 1.6 API usage * remove excessive comments * Flip inits to correct ifdef section * rework ifdef to be simpler * format issue * Reformat ifdef inits * remove static attribute * format compliance * Update names * Revert because logic relies on float not being int * Changes noticed from creating merge of #412 * Double underscore change * Correct compiler version variable used * Remove header guard underscores * Whitespace cleanup * Split format source and commit changes on repo push * remove pre-split setting * Change windows TS to use older VS. * correct window os name * HDFFV-11212 JNI export util and Javadoc * Suggested review changes * Another change found * Committing clang-format changes * HDFFV-11113 long double in tools * HDFFV-11113 add note * Disable long double tests for now * HDFFV-11228 remove arbitrary CMake warning groups. * Make each flag a string * Some Javadoc warning fixes * Updated javadoc fixes * # WARNING: head commit changed in the meantime HDFFV-11229 Fix long double usage in tools and java Changed h5dump and h5ls to just print 128-bit for long double type. Added test and file for dataset and attributes with all three float types. * Committing clang-format changes * HDFFV-11229 Add release note * HDFFV-11229 windows testfile needed * fix typo * Remove non supported message text * HDFFV-11229 - change ldouble test to check both native and general * HDFFV-11229 add second file compare * HDFFV-11229 fix reference file * HDFFV-11229 autotools check two refs * HDFFV-11229 revert back to removal of NATIVE_LDOUBLE in tools output * Committing clang-format changes * Update release note * Update attribute type of ref file * Change source of ninja for macs * try port instead of brew * Recommended is to use brew. * Undo non long double changes * remove unneeded file * Fix perl and doxygen CMake code * Add "option" command for clang options * Rework CMake add_custom to use the BYPRODUCTS argument * Add stamp files to BYPRODUCTS * Only one copy of file exists * Fix custom cmmand depends targets * Fix fortran custom command DEPENDS * Add LD_LIBRARY_PATH to tests * Add custom target for DEPENDS * Add h5detect conditionaly to generated target DEPENDS * Correct DEPENDS targets * Parallel builds need the mpi compiler for pkgconfig scripts. * install only if MPI build * Fortran target depends * Remove incorrect source attribute * doxygen adjustments * doxygen build updates * Correct version * Correct function version - function has been merged to 1.12 * Correct version string for map functions * Cleanup warnings for tools debug builds * TRILAB-227 - fix indexing for h5diff selections * Correct location of pos to index function call * TRILAB-227 Enable test * Quote subset args * Use MATCHES because of AppleClang * if blocks needed for build modes * Update list of DT platforms * VS2019 correctly displays float values * revert VS2019 change * Issue #669 remove version from pkgcfg filename * remove version from h5cc script * Java reference functions updated enabled fortran in cmake gcc action yaml file java reference test changed to correctly test refs jni reference functions that create ids changed to use jni id logging * Correct BYPRODUCTS argument * Correct more genereated files BYPRODUCTS * BYPRODUCTS must have unique locations * Fix typo Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Removes alternative function enter/leave macro scheme (#678) * Committing clang-format changes * Converted BEGIN_FUNC, etc. macros to FUNC_ENTER * Rips out the BEGIN_FUNC, etc. macros * Removes 'end if', etc. comments from H5HL package * Committing clang-format changes * Fixes an H5EA iterate issue * Fixes an issue in the H5FA iterator code * Further cleanup in bin/trace after macro removal * Iterator changes in H5EA and H5FA Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Split H5L.c internal code to H5Lint.c (#691) * Committing clang-format changes * Splits internal parts of H5L.c to H5Lint.c Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Clean up type size checks in configure.ac (#702) * Committing clang-format changes * C++ warning and build fixes (#707) * Committing clang-format changes * C++ build and warning updates * Fixes all warnings on C++ (with gcc 9.3) * Updates CMake and Autotools C++ builds * Undo warning clobber Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Removes some DEC Alpha cruft from H5detect and H5private.h (#708) * Cleans up hsize_t and haddr_t size guessing (#709) * Cleans up definitions of haddr_t and hsize_t + cruft removal * Formatted source * Updates PGI C/C++ configurations (#715) * Updates PGI C/C++ configurations Tweaks some settings and configures pgc++ to use C++11 * Updated copyright information * Adds an Intel C++ configuration file (#716) * Adds an Intel C++ configuration file * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Updates bin/trace script to correctly wrap H5TRACE macros near clang-format column limit (#719) * Removes clang-format comments from H5O.c call * Fixes bin/trace to correctly wrap lines near the clang-format limit * Removed unused variable from bin/trace * Fixes issue with ccmake that prevents building Fortran (#723) ccmake runs iteratively, and the check_fortran_source_runs macros were clobbering a single output file that did not get updated on further configure iterations Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Brings more develop code over, especially DoxygenDana Robinson2021-05-031-0/+586
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* Updates license url and history docsDana Robinson2021-03-253-3/+3
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* Brings some Autotools improvements over from developDana Robinson2021-03-241-6/+12
| | | | | | | | * configure.ac tidying * helpful XCode comments * FreeBSD improvements * Fixes for finding Java on MacOS * The improved warnhist script
* Trim trailing whitespaceQuincey Koziol2020-05-202-16/+16
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* Fixed issue building HDF5 with NAG Fortran 7.0.M. Scot Breitenfeld2020-05-201-6/+19
| | | | | | Accounted for the additon of half precision floating-point with a KIND=16. HDFFV-11033
* Merge all of my changes from merge-back-to-feature-vfd_swmr-attempt-1,David Young2019-12-0918-185/+96
| | | | | | | | including the merge of `hdffv/hdf5/develop`, back to the branch that Vailin and I share. Now I need to put this branch on a fork with a less confusing name than vchoi_fork!
* Fixed a bug in autotools Fortran processing where a test for theDana Robinson2017-06-292-2/+1
| | | | presence of a C long double type always returned true.
* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-253-12/+21
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* Added number of integer KINDs found to the header files.M. Scot Breitenfeld2016-09-261-1/+4
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* [svn-r30301] Changed the print ordering of the SIZE_OF/KIND program output ↵Scot Breitenfeld2016-08-181-9/+9
| | | | | | in order to match what is done in cmake. Tested: gnu, jelly.
* [svn-r30300] Fixed the ordering for KIND and SIZE_OF in the fortarn program ↵Scot Breitenfeld2016-08-181-3/+3
| | | | | | | | in order to match the sed commands. Should only matter for the NAG compiler. Tested: (gnu, jelly)
* [svn-r30209] HDFFV-9467: Use the same test programs for CMake and autotoolsScot Breitenfeld2016-07-201-54/+14
| | | | | | -- Modified C++ to use the same test programs. Tested: jelly (gnu)
* [svn-r30198] HDFFV-9467: Use the same test programs for CMake and autotoolsScot Breitenfeld2016-07-181-0/+136
| | | | Tested: jelly (gnu)
* [svn-r30196] HDFFV-9467: Use the same test programs for CMake and autotoolsScot Breitenfeld2016-07-181-145/+24
| | | | Tested: jelly (gnu)
* [svn-r30064] Changed configure's behavior from a warning to an error Scot Breitenfeld2016-06-091-9/+9
| | | | | | | if the available Fortran KINDs, or Fortran decimal precision, can not be determined. (MSB, HDFFV-9922)
* [svn-r29928] HDFFV-9912:Scot Breitenfeld2016-05-121-48/+57
| | | | | | | | | | configure fails to detect valid KINDs on FreeBSD Added the exponential option to SELECTED_REAL_KIND to distinguish KINDs of same precision. Tested: FredBSD, jam, platypus.
* [svn-r29226] HDFFV-9552: merge in java code.Allen Byrne2016-02-2918-0/+1459
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* [svn-r27745] Merge trunk revision 27744Allen Byrne2015-09-101-1/+1
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* [svn-r27638] Merged r27500-27631 from trunk.Dana Robinson2015-09-011-17/+17
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| * [svn-r27517] Removed all perl scripts from configure.Scot Breitenfeld2015-08-171-17/+17
| | | | | | | | Tested: h5committest
* | [svn-r27507] Merge of r27237-27500 from the trunk.Dana Robinson2015-08-141-19/+326
|\ \ | |/ | | | | | | | | | | | | Tested w/ h5committest NOTES: - The manifest may still be messed up. - Cmake fails since the dual binary work needs to be merged with this repo's CMake externals.
| * [svn-r27493] Trying again to merge the F2003_v1.10 branch to the trunk.Scot Breitenfeld2015-08-111-19/+326
| | | | | | | | Tested: h5committest --PASSED--
| * [svn-r27489] reverted merge of branchScot Breitenfeld2015-08-111-326/+19
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| * [svn-r27488] Merged the F2003_v1.10 branch to the trunk.Scot Breitenfeld2015-08-111-19/+326
| |\ | | | | | | | | | Tested: h5committest
| | * [svn-r27401] code cleanupScot Breitenfeld2015-07-161-17/+4
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| | * [svn-r27326] Working version of cmake on linux.Scot Breitenfeld2015-07-021-6/+4
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| | * [svn-r27299] Changed from using sed to perl.Scot Breitenfeld2015-06-301-11/+10
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| | * [svn-r27297] changed from using sed to perlScot Breitenfeld2015-06-291-41/+47
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| | * [svn-r27285] added search replace for space to commaScot Breitenfeld2015-06-251-0/+2
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| | * [svn-r27232] fixed C test program for float128Scot Breitenfeld2015-06-171-0/+2
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| | * [svn-r27230] added test for float128Scot Breitenfeld2015-06-171-1/+5
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| | * [svn-r27225] new test for __float128Scot Breitenfeld2015-06-171-9/+7
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| | * [svn-r27223] Added check for quadmath.hScot Breitenfeld2015-06-171-0/+2
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| | * [svn-r27221] Reworked Fortran autools REAL KIND detection.Scot Breitenfeld2015-06-161-5/+35
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| | * [svn-r27167] more DT fixesScot Breitenfeld2015-06-091-5/+21
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| | * [svn-r27164] various bug fixes for DTScot Breitenfeld2015-06-081-0/+34
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| | * [svn-r27154] fixed issue with mis-matching long double between Fortran and CScot Breitenfeld2015-06-051-6/+5
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| | * [svn-r27151] fixed __float128 errorsScot Breitenfeld2015-06-041-44/+70
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| | * [svn-r27140] fixed interger*16 supportScot Breitenfeld2015-06-031-3/+2
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| | * [svn-r27134] Switched to uses a verify for each kind for the tests. Testing ↵Scot Breitenfeld2015-06-011-0/+14
| | | | | | | | | | | | quad precision.
| | * [svn-r27122] removed dependency on generatored fortran source codeScot Breitenfeld2015-05-281-2/+2
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| | * [svn-r27119] handles INTEGER*16 caseScot Breitenfeld2015-05-281-2/+2
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| | * [svn-r27115] Moved testing KINDs and SIZEOFs to configure.Scot Breitenfeld2015-05-271-1/+190
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| | * [svn-r26917] added conditional for C_LONG_DOUBLEScot Breitenfeld2015-04-231-0/+35
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| | * [svn-r26866] Removed the default REAL and DOUBLE PRECESION dependency.Scot Breitenfeld2015-04-211-33/+0
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* | [svn-r26350] Merge of r26273-26348 from the trunk.Dana Robinson2015-03-041-6/+6
|\ \ | |/ | | | | Tested on: h5committest
| * [svn-r26280] Removed tab indenting for Fortran source, tab indenting is not ↵Scot Breitenfeld2015-02-231-6/+6
| | | | | | | | F2003 standard compliant.
| * [svn-r26247] Reverted back from using 'USE MPI' to include 'mpif.h' since ↵Scot Breitenfeld2015-02-201-1/+1
| | | | | | | | windows does not seem to support 'USE MPI'.
| * [svn-r26188] Merged autotools fixes into the trunk:Scot Breitenfeld2015-02-162-0/+404
| | | | | | | | HDFFV-9089, HDFFV-9091, HDFFV-9092, HDFFV-9094, HDFFV-9095
generated by cgit v0.12 at 2024-11-09 21:30:59 (GMT)