| Commit message (Collapse) | Author | Age | Files | Lines |
|
|
|
|
|
|
|
|
|
| |
Bug Fix
Description:
Some more naming mistakes.
Solution:
Stopped calling it ds_start and calling the structure its real name.
Platforms tested:
NERSC
|
|
|
|
|
|
|
|
| |
Bug Fix
Description:
Structure elements in the GPFS code weren't named correctly.
Solution:
Changed the names to the correct values.
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Update, Bug Fix, and Feature Add
Description:
- Updated how AC_{ENABLE,WITH} help messages were being generated.
Autoconf now gives you an AC_HELP_STRING macro to use to create
them.
- Fixed the problem with Linux LFS on RedHat 7.3 machines. It wasn't
finding getdents64(), so we can't rely on that being present
anymore...
- Added GPFS detection and setting.
- Updated how compression is specified. It's no longer necessary to
test for HAVE_ZLIB_H, HAVE_LIBZ, and HAVE_COMPRESS2. The one macro
{H5_}HAVE_COMPRESSION takes care of all of these.
Solution:
Changed the check for Linux LFS from looking for getdents() to
looking at the version number of the kernel (using the uname -r
command). You can still override with the --enable-linux-lfs switch
if you really believe that your <2.4 kernel has LFS support.
Platforms tested:
Linux (2.2 and 2.4)
|
|
|
|
|
|
|
|
|
|
| |
New feature.
Description:
Added MPI-posix VFL driver support.
Platforms tested:
FreeBSD 4.6 (sleipnir) w/parallel & IRIX64 6.5 (modi4) w/parallel
|
|
|
|
|
|
|
|
|
|
| |
New features, etc.
Description:
Bring over all the recent changes from the release branch.
Platforms tested:
IRIX64 6.5 (modi4) w/parallel
|
|
|
|
|
|
|
|
| |
Bring in sync with v1.4 versions that have copyright statements
added.
Platforms tested:
eirene(pp). Only one machine tested because all changes are merely
comments.
|
|
|
|
|
|
|
|
|
|
| |
New Feature
Description:
Added support for collective I/O with MPI and HDF5 access methods.
Platforms tested:
IRIX64 6.5 (modi4) w/parallel
|
|
|
|
|
|
|
|
|
|
|
|
| |
New Feature
Description:
Added interleaved block pattern to MPI and HDF5 access methods. Also,
changed the blocks to just use the same size as the regular blocks for I/O,
instead of a separate block size.
Platforms tested:
IRIX64 6.5 (modi4) w/parallel
|
|
|
|
|
|
| |
sync with v1.4 of usage messages.
Platforms tested:
eirene pp.
|
|
|
|
|
|
|
|
|
|
| |
Code cleanup
Description:
Removed more compiler warnings, etc.
Platforms tested:
Linux 2.2.x (eirene) w/parallel
|
|
|
|
|
|
|
|
|
|
| |
Code cleanup
Description:
Turn on more warnings in the IRIX builds and clean them up.
Platforms tested:
IRIX64 6.5 (modi4) w/parallel
|
|
|
|
|
|
|
|
|
|
| |
Feature Add
Description:
Allow you to specify the percentage you'd like a random buffer to be
compressible. It can go from 0% (non-compressible) to 100%
(completely compressible).
Platforms tested:
FreeBSD
|
|
|
|
|
|
|
|
|
| |
Feature Add
Description:
Use the /dev/urandom device for random data if it's available. (That
is stat() doesn't return a -1 when ran on it). Use random() otherwise.
Platforms tested:
Linux, FreeBSD
|
|
|
|
|
|
|
|
|
| |
Feature Add
Description:
Added a feature that outputs the total time spent compressing all of
the blocks of data.
Platforms tested:
Linux
|
|
|
|
|
|
|
|
|
|
| |
Code cleanup
Description:
Clean up some compiler warnings...
Platforms tested:
FreeBSD 4.5 (sleipnir)
|
|
|
|
|
|
|
|
| |
More Output
Description:
Added some more output, including the compression ratio.
Platforms tested:
Linux, FreeBSD
|
|
|
|
|
|
|
|
|
|
| |
Bug Fix
Description:
The test for compression needed to be reversed.
Solution:
Instead of "!(defined...) used just "(defined..."
Platforms tested:
Modi4
|
|
|
|
|
|
|
|
|
| |
Bug Fix take 2
Description:
The check for ZLIB_H wasn't sufficient.
Solution:
Used the test for compression stuff that was in the test/dsets.c
file.
|
|
|
|
|
|
|
|
|
|
| |
Bug Fix
Description:
Not all platforms have zlib. This shouldn't be compiled then.
Solution:
ifdef-ed the code out if the zlib wasn't specified.
Platforms tested:
Linux
|
|
|
|
|
|
|
|
| |
Feature Add
Description:
Added ability to fill the data buffer with random data.
Platforms tested:
Linux
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Feature Update
Description:
It now writes an uncompressed version of the file out. The first
tests didn't look all that wonderful. Here is a typical output:
Buffer size == 1MB
Uncompressed Write Time: 0.55s
Uncompressed Write Throughput: 116.00MB/s
Compressed Write Time: 8.76s
Compressed Write Throughput: 7.31MB/s
Platforms tested:
Linux
|
|
|
|
|
|
|
|
|
|
|
|
| |
Compress I/O Test Add
Description:
This is the initial check-in of the compress I/O test. It will write
out compressed buffers to a file.
I need to implement a write of uncompressed data first for
comparison...
Platforms tested:
Linux
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Bug fix.
Description:
H5Fopen call was using H5P_DEFAULT instead of file access flags
Solution:
Changed H5P_DEFAULT to H5F_ACC_RDONLY
Platforms tested:
IRIX64 6.5 (modi4) w/parallel
|
|
|
|
|
|
| |
Added the '-D v' option for "verify data correctness".
Platforms tested:
modi4, eirene, burrwhite (all pp).
|
|
|
|
|
|
|
|
|
| |
Feature Add
Description:
Added support for testing only the "write" operations. Use the "-w"
or "--write-only" flags for this.
Platforms tested:
Linux (parallel) & Modi4 (parallel)
|
|
|
|
|
|
|
|
|
|
| |
Bug Fix
Description:
Still was calling the POSIX stuff "Raw".
Solution:
Changed name to POSIX instead of Raw...
Platforms tested:
Linux
|
|
|
|
|
|
|
|
|
|
|
|
| |
Bug Fix
Description:
There was an error in the way it was determining if there were any
reads to report.
Solution:
Wrote a subroutine which would determine if the reads are defined in
the structure before trying to print them out.
Platforms tested:
Linux
|
|
|
|
|
|
|
|
|
|
|
| |
Add Report Generator
Description:
This is a generator for ASCII and Excel(tm)(c) reports generated by
the pio_perf benchmark we run. There are instructions at the top of
the file on how to run the program and the input format it expects,
etc.
Platforms tested:
Linux
|
|
|
|
|
|
|
|
|
| |
Features
Description:
Added a few macros to print rank and size of MPI_COMM_WORLD in
a unifed style.
Platforms tested:
modi4, eirene, burrwhite
|
|
|
|
|
|
|
|
|
|
|
| |
Code cleanup and new feature.
Description:
Cleaned out some old debug print statments.
Added option -B for interleaved I/O block size.
(Just parsing and sanity check is done. Real I/O implementation
is not done yet.)
Platforms tested:
eirene(pp)
|
|
|
|
|
|
|
|
|
| |
Removal of bad code
Description:
Albert came up with a better way of determining which performance
tests to run. I removed the broken way I did them...
Platforms tested:
Linux-pp
|
|
|
|
|
|
|
| |
Show IO API types selected. (Changed the default setting algorithm
slightly.)
Platforms tested:
eirene(pp)
|
|
|
|
|
|
|
| |
Renamed pio_info_g as h5_io_info_g to better reflect its
general purpose.
Platforms tested:
eirene(pp)
|
|
|
|
|
|
| |
updated the Dependencies file
Platforms tested:
no test.
|
|
|
|
|
|
|
| |
Sync with changes Kent made to v1.4.
still need to sync changes here back to v.14
Platforms tested:
eirene(pp)
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
bug fix
Description:
pio_info_g has been moved to the test/libh5test.a but the
pio_* source files still have the old definition and declaration.
Some compilers hated the duplcation.
Solution:
Replaced the duplication with #include h5test.h and added test/ to
the include search path too.
Platforms tested:
eirene, modi4.
|
|
|
|
|
|
|
|
|
| |
Update
Description:
Only print out the parameters for a run if we're in debug mode one
and the 0'th process or if we're in debug mode > 0.
Platforms tested:
Linux
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Feature Addition
Description:
Added feature which prints out the parameters and the MPI_Info object
for a run for each process.
Added some functions for the GPFS system. They are ifdef'ed out right
now (well, they need to ahve the non-existant H5_HAVE_GPFS macro set)
and aren't in use just yet. But the stub functions are there.
Platforms tested:
Linux
|
|
|
|
|
|
|
|
|
|
|
| |
Folded the changes made in v1.4 into v1.5.
print library version information in help page too.
Specify the nofill feature supported in v1.5 only.
Print the values of the KB, MB and GB in case a user wants to see them.
Setup a macro, H5_HAVE_NOFILL, to indicate if Dataset no fill feature
is supported. If not, --no-fill is an invalid option.
Platforms tested:
modi4
|
|
|
|
|
|
|
|
|
|
| |
Update
Description:
Updating the source for the PIO performance tests with the current
code that's in the V1.4 branch. It includes the newest command-line
parameters.
Platforms tested:
Linux-pp
|
|
|
|
|
|
|
|
|
| |
Feature
Description:
moved the routines of setting up and dumping MPI-info object to
test library so that it is avaiable for all tests too.
Platforms tested:
modi4(pp), eirene (serial)
|
|
|
|
|
|
|
| |
Folded the added feature of setting MPI Info object from v1.4 to this
branch.
Platforms tested:
modi4
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Bug fix
Description:
Was not able to handle data size (file size) larger than 32bits.
Was using long, which is only 4 bytes big in SP, thus overflowing
into negative when trying to address 2GB or larger.
Solution:
Changed those variables involved in file size/offset calculation
to type off_t. (If a certain system/compiler has off_t defined
as 4 bytes, it can't write to file size larger than 2GB anyway.)
Note that the lseek of SP with -D_LARGE_FILE still fails for
offset larger than 2GB (works for 2GB). That has to be fixed
soon.
Platforms tested:
burrwhite (linux 2.4) and modi4 parallel.
|
|
|
|
|
|
|
| |
Added the calculation and printing (when debug >=3) of the
MPI_write/read statistics.
Platforms tested:
modi4
|
|
|
|
|
|
| |
Changed all API to use MPI_WTIME timer. Just to be consistent.
Platforms tested:
modi4
|
|
|
|
|
|
|
|
|
| |
Name Change
Description:
Changed the macro's name from "MILLISECOND" to "MICROSECOND" since,
as Quincey pointed out, that's what it is ;).
Platforms tested:
Linux
|
|
|
|
|
|
|
|
|
| |
Bug fix
Description:
The system timer forgot to add previous cummulated time.
Fixed.
Platforms tested:
modi4
|
|
|
|
|
|
|
|
|
|
| |
Code cleanup
Description:
Remove incorrect MPI_Barrier() call in data I/O loop.
Platforms tested:
IRIX64 6.5 (modi4)
|
|
|
|
|
|
|
|
|
|
| |
Bug fix, feature
Description:
Added code to time pure MPI_File_write_xxx and read_xxx routines.
Moved the setting of the timer_g to when timer is created (new)
and destroyed.
Platforms tested:
modi4pp
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Modification
Description:
Put some of the variables into the global space so that random
functions can access them. (The output and timer variables which
point to the output file and timer resp.)
Placed the debug level 4 prints into the timer module so that it's
easier to automatically put timer start/stop printfs for new timers
which are created.
Added timers for MPI Time calls (called HDF5_MPI_WRITE and
HDF5_MPI_READ).
Platforms tested:
Linux
|