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* HDFFV-10865 - merge from dev, HDFArray perf fix. (#234)Allen Byrne2020-12-291-1/+10
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* OESS-98 Update plugin build option (#172)Allen Byrne2020-12-151-37/+56
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* hdf5 1 10 release text (#111)Allen Byrne2020-11-235-1192/+4166
| | | | | | | * Merge changes from 1.12/dev * Add chkmanifest * Update release text files, mostly whitespace
* hdf5 1 10 merge changes from dev (#107)Allen Byrne2020-11-201-3/+0
| | | | | * Merge changes from 1.12/dev * Add chkmanifest
* Add doxygen framework for CMake and autotools (#90)Allen Byrne2020-11-202-0/+12
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* Correct TARGET variable and CMake config file locationAllen Byrne2020-11-122-0/+19
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* HDFFV-10868 add release noteAllen Byrne2020-11-051-1/+8
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* OESS-98 - add option to build plugin library with hdf5Allen Byrne2020-10-231-5/+5
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* URL and options correctionsAllen Byrne2020-10-191-1/+1
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* Add missing file referenceAllen Byrne2020-10-191-0/+1
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* OESS-98 add CMake option to build plugins project within hdf5Allen Byrne2020-10-163-9/+132
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* Merge from developAllen Byrne2020-10-071-2/+2
| | | | | | github updates bin scripts updates parser changes remove obsolete file
* Correct entries related to --enable-build-mode and --enable-profiling inLarry Knox2020-10-031-3/+6
| | | | | INSTALL file, update COPYING file, also removing obsolete SZIP paragraph from it.
* Merge of clang-format changes from developAllen Byrne2020-09-301-1/+8
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* Update so numbers for hdf5 1.10.7 release.Larry Knox2020-08-301-653/+85
| | | | | Remove RELEASE.txt entries through 1.10.7 release. Update Platforms supported and tested.
* HDFFV-11018 Add Fortran H5F_LIBVER_V*_F definitionsScot Breitenfeld2020-08-261-0/+11
| | | | | | | | | | | | | | | | | | | Added ------ New Definitions: INTEGER :: H5F_LIBVER_ERROR_F INTEGER :: H5F_LIBVER_NBOUNDS_F INTEGER :: H5F_LIBVER_V18_F INTEGER :: H5F_LIBVER_V110_F New API: h5pget_libver_bounds_f(fapl_id, low, high, hdferr) Removed: call to C wrapper h5pset_libver_bounds_c in h5pset_libver_bounds_f Updated Release notes.
* Update version to 1.8.0-1 for CMake test failure.Larry Knox2020-08-241-1/+1
| | | | | | | | | | | if (H5_VERS_SUBRELEASE) set (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}-${H5_VERS_SUBRELEASE}") else () if (${H5_VERS_SUBRELEASE} STREQUAL "") set (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}") else () set (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}-${H5_VERS_SUBRELEASE}") endif ()
* Brings the MPI datatype fixes from developDana Robinson2020-08-221-0/+6
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* Updated HDF5 1.10 support branch version number to 1.10.8-0Larry Knox2020-08-191-1/+1
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* Update RELEASE.txt to correct merge problems and text formatting.Larry Knox2020-08-191-23/+25
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* Update RELEASE.txt entry.Larry Knox2020-08-191-4/+7
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* Merge branch 'hdf5_1_10' of ↵Larry Knox2020-08-191-0/+7
|\ | | | | | | https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_10
| * Updated bug fix for HDFFV-11101Binh-Minh Ribler2020-08-181-0/+7
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* | Remove entries for HDF5 1.10.6 release.Larry Knox2020-08-191-212/+84
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* Merge pull request #2772 in HDFFV/hdf5 from ↵Larry Knox2020-08-181-0/+11
|\ | | | | | | | | | | | | | | ~BMRIBLER/hdf5_bmr:hdf5_bmr_HDFFV-10933_110 to hdf5_1_10 * commit '538bdb35ae932a1445f32a04e8173f8805d404f8': Updated for HDFFV-10933 Fixed HDFFV-10933
| * Updated for HDFFV-10933Binh-Minh Ribler2020-08-161-0/+11
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* | Merge pull request #2753 in HDFFV/hdf5 from ~EPOURMAL/hdf5_ep:develop to develoElena Pourmal2020-08-171-2/+6
| | | | | | | | | | Code was already merged to hdf5_1_10. Merging the RELESE.txt entry for HDFFV-10436.
* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2020-08-151-1/+124
|\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'c638d93f3e660ce669a36e50a02473aac126953d': Fixes missing chunk_info entry in CMake files Even more normalization with develop More normalizations with develop Misc normalizations with develop Normalization of perform directory with develop Brings monotonic timer changes from develop Brings Mirror VFD to 1.10 from develop Brings splitter VFD from develop Brings file locking changes from develop
| * | Brings Mirror VFD to 1.10 from developDana Robinson2020-08-141-0/+6
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| * | Brings splitter VFD from developDana Robinson2020-08-141-0/+8
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| * | Brings file locking changes from developDana Robinson2020-08-141-1/+110
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* | HDFFV-9984 Add merge/prune h5repack options for ext linksAllen Byrne2020-08-151-1/+10
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* SpellingAllen Byrne2020-08-131-3/+3
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* HDFFV-11127 - force RTLD_LOCAL in dlopenAllen Byrne2020-08-121-0/+9
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* Brings HDFFV-11027 H5S_NO_CLASS fix to 1.10 from developDana Robinson2020-08-111-0/+16
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* Fixed typoBinh-Minh Ribler2020-08-041-1/+1
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* Fix HDFFV-11120 and HDFFV-11121 (CVE-2018-13870 and CVE-2018-13869)Binh-Minh Ribler2020-08-031-0/+11
| | | | | | | | | | | Description: When a buffer overflow occurred because a name length was corrupted and became very large, h5dump produced a segfault on one file and a memcpy parameter overlap on another file. This commit added checks that detect a read pass the end of the buffer to prevent these error conditions. Platforms tested: Linux/64 (jelly)
* Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2020-07-291-0/+14
|\ | | | | | | | | | | * commit '475120abfb493098e907fe40073260f48b35d15d': Supply the appropriate file pointer to H5T_patch_vlen_file() without H5F_VOL_OBJ from develop branch. Merge pull request #2693 in HDFFV/hdf5 from ~VCHOI/my_third_fork:bugfix/HDFFV-11080-heap-use-after-free-by-the-call to develop
| * Merge pull request #2693 in HDFFV/hdf5 from ↵Vailin Choi2020-07-211-0/+14
| | | | | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/HDFFV-11080-heap-use-after-free-by-the-call to develop * commit '3023b34272cc6ada84aebfa7441a6a55afa3621c': Update MANIFEST. Add new test to Cmake. Fix for jira issue HDFFV-11080: (1) Patch up the file pointer when reading attribute of variable length datatype (2) Test to verify the fix when doing multiple threads
* | Merge from dev of tools changesAllen Byrne2020-07-221-0/+38
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* CMake updates:Allen Byrne2020-07-152-0/+33
| | | | | | Add build folder as Include for generated files Add install option for copying Fortran mod files to include folder Add PRI defines to win32defs file Exclude mingw from extra flags
* Merge pull request #2679 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2020-07-071-1/+7
|\ | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'c0702f601eb4e0b4116a7ed02999746c20420cad': Change load path in libhdf5_java.dylib to unversioned libhdf5.dylib for junit tests on Macs. Merge pull request #2667 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop Merge pull request #2670 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
| * Merge pull request #2670 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2020-07-061-1/+7
| | | | | | | | | | * commit 'fc69de0e8ae30e80c1c3c542b156226a75444525': Lib files needed are now copied to a subdirectory in the java/test directory, and on Macs the loader path for libhdf5.xxxs.so is changed in the temporary copy of libhdf5_java.dylib. Fix for HDFFV-11063
* | Fix HDFFV-10591Binh-Minh Ribler2020-07-051-0/+12
|/ | | | | | | | | | | Description: h52gif produced a segfault when a buffer overflow occurred because the data size was corrupted and became very large. This commit added a check on the data size against the buffer size to prevent the segfault. It also added error reporting to h52gif to display an error message instead of silently exiting when the failure occurred. Platforms tested: Linux/64 (jelly)
* Removed trailing whitespace from source files.Dana Robinson2020-05-265-3087/+3087
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* Added a RELEASE.txt note for the 0-size dataset fix.Dana Robinson2020-05-201-0/+4
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* OESS-65 Fix packagingAllen Byrne2020-05-081-0/+1
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* Merged HDFFV-10792 parallel compression fix from develop.Dana Robinson2020-04-301-0/+14
| | | | This was a manual cherry pick.
* Correct cmake version in textAllen Byrne2020-04-271-2/+2
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* OESS-65 replace szip with aec szipAllen Byrne2020-04-273-1/+20
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