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* HDFFV-11127 - force RTLD_LOCAL in dlopenAllen Byrne2020-08-121-0/+9
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* Brings HDFFV-11027 H5S_NO_CLASS fix to 1.10 from developDana Robinson2020-08-111-0/+16
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* Fixed typoBinh-Minh Ribler2020-08-041-1/+1
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* Fix HDFFV-11120 and HDFFV-11121 (CVE-2018-13870 and CVE-2018-13869)Binh-Minh Ribler2020-08-031-0/+11
| | | | | | | | | | | Description: When a buffer overflow occurred because a name length was corrupted and became very large, h5dump produced a segfault on one file and a memcpy parameter overlap on another file. This commit added checks that detect a read pass the end of the buffer to prevent these error conditions. Platforms tested: Linux/64 (jelly)
* Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2020-07-291-0/+14
|\ | | | | | | | | | | * commit '475120abfb493098e907fe40073260f48b35d15d': Supply the appropriate file pointer to H5T_patch_vlen_file() without H5F_VOL_OBJ from develop branch. Merge pull request #2693 in HDFFV/hdf5 from ~VCHOI/my_third_fork:bugfix/HDFFV-11080-heap-use-after-free-by-the-call to develop
| * Merge pull request #2693 in HDFFV/hdf5 from ↵Vailin Choi2020-07-211-0/+14
| | | | | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/HDFFV-11080-heap-use-after-free-by-the-call to develop * commit '3023b34272cc6ada84aebfa7441a6a55afa3621c': Update MANIFEST. Add new test to Cmake. Fix for jira issue HDFFV-11080: (1) Patch up the file pointer when reading attribute of variable length datatype (2) Test to verify the fix when doing multiple threads
* | Merge from dev of tools changesAllen Byrne2020-07-221-0/+38
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* CMake updates:Allen Byrne2020-07-152-0/+33
| | | | | | Add build folder as Include for generated files Add install option for copying Fortran mod files to include folder Add PRI defines to win32defs file Exclude mingw from extra flags
* Merge pull request #2679 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2020-07-071-1/+7
|\ | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'c0702f601eb4e0b4116a7ed02999746c20420cad': Change load path in libhdf5_java.dylib to unversioned libhdf5.dylib for junit tests on Macs. Merge pull request #2667 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop Merge pull request #2670 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
| * Merge pull request #2670 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2020-07-061-1/+7
| | | | | | | | | | * commit 'fc69de0e8ae30e80c1c3c542b156226a75444525': Lib files needed are now copied to a subdirectory in the java/test directory, and on Macs the loader path for libhdf5.xxxs.so is changed in the temporary copy of libhdf5_java.dylib. Fix for HDFFV-11063
* | Fix HDFFV-10591Binh-Minh Ribler2020-07-051-0/+12
|/ | | | | | | | | | | Description: h52gif produced a segfault when a buffer overflow occurred because the data size was corrupted and became very large. This commit added a check on the data size against the buffer size to prevent the segfault. It also added error reporting to h52gif to display an error message instead of silently exiting when the failure occurred. Platforms tested: Linux/64 (jelly)
* Removed trailing whitespace from source files.Dana Robinson2020-05-265-3087/+3087
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* Added a RELEASE.txt note for the 0-size dataset fix.Dana Robinson2020-05-201-0/+4
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* OESS-65 Fix packagingAllen Byrne2020-05-081-0/+1
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* Merged HDFFV-10792 parallel compression fix from develop.Dana Robinson2020-04-301-0/+14
| | | | This was a manual cherry pick.
* Correct cmake version in textAllen Byrne2020-04-271-2/+2
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* OESS-65 replace szip with aec szipAllen Byrne2020-04-273-1/+20
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* Snapshot version 1.10 release 7 (snap0)hdftest2020-04-261-1/+1
| | | | Update version to 1.10.7-1
* TRILAB-192 - merge changes from developAllen Byrne2020-04-071-3/+5
| | | | Single source, config files, for warnings for both autotools and CMake. Update CMake libraries, tools, tests to use correct flags.
* Update release note for CMake warningsAllen Byrne2020-04-031-0/+2
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* Correct extra flags and merge TRILAB-24Allen Byrne2020-04-011-0/+7
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* TRILAB-192 merging warnings changes from developAllen Byrne2020-03-301-0/+17
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2020-03-011-0/+7
|\ | | | | | | | | | | | | | | * commit '42106363903e7a7d4a0c2cd1b38aad9a54f2eeff': Fixed configure issue when building HDF5 with NAG Fortran 7.0. Fixed issue building HDF5 with NAG Fortran 7.0. revert type cast Merge pull request #2244 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/intel_warnings to develop
| * Fixed configure issue when building HDF5 with NAG Fortran 7.0.M. Scot Breitenfeld2020-02-281-0/+7
| | | | | | | | | | HDF5 now accounts for the addition of half-precision floating-point in NAG 7.0 with a KIND=16.
* | Fix gif2h5 tool build on windowsAllen Byrne2020-02-281-5/+1
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* | Merge CMake and tools changes from developAllen Byrne2020-02-276-170/+184
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* update HDFFV-11029M. Scot Breitenfeld2020-02-181-1/+3
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* Merge from dev, sanitizer, fortran, warnings and tools idsAllen Byrne2020-02-111-2/+27
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* HDFFV-11014, fix the h5repack issue that misses a few attributes during the ↵Muqun Yang2020-02-101-0/+10
| | | | repacking. The flag that checks the object reference attribute is not updated properly. The fix is trivial. Just need to move the flag update line into the inner loop. Tested at Jelly. Also update the release.txt.
* Added new CMake options for testsAllen Byrne2020-01-191-0/+20
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* Update HISTORY-1_10.txt with RELEASE.txt from HDF5 1.10.6 release.Larry Knox2019-12-261-0/+583
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* Add missing noteAllen Byrne2019-12-191-0/+12
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* Update version for HDF5_1_10Larry Knox2019-12-111-1/+1
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* Latest date first in RELEASE.txtChris Hogan2019-12-101-6/+6
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* Update RELEASE.txt with performance improvementsChris Hogan2019-12-101-0/+6
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* Add fix of Jira 10934 to RELEASE.txtChris Hogan2019-12-091-0/+6
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* HDFFV-10962 add VS2019 supportAllen Byrne2019-11-184-33/+30
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* Snapshot version 1.10 release 6 (snap3)Larry Knox2019-11-121-1/+1
| | | | Update version to 1.10.6-snap4
* HDFFV-10408,10918 add noteAllen Byrne2019-10-021-4/+11
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2019-09-191-0/+11
|\ | | | | | | | | * commit 'fb05ff4c4a392d38a45e79fe461bc690dea6f325': Added MPICH_SKIP_MPICXX and OMPI_SKIP_CXX to H5public.h to avoid inadvertant linking to the deprecated MPI C++ wrappers. Fixes HDFFV-10893.
| * Merge pull request #1928 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:1_10_minor_pr ↵Dana Robinson2019-09-181-0/+11
| |\ | | | | | | | | | | | | | | | | | | to hdf5_1_10 * commit '71c80267ba0db1c1b439d39e4bd7c27b82510c92': Added MPICH_SKIP_MPICXX and OMPI_SKIP_CXX to H5public.h to avoid inadvertant linking to the deprecated MPI C++ wrappers. Fixes HDFFV-10893.
| | * Added MPICH_SKIP_MPICXX and OMPI_SKIP_CXX to H5public.h to avoid inadvertantDana Robinson2019-09-171-0/+11
| | | | | | | | | | | | linking to the deprecated MPI C++ wrappers. Fixes HDFFV-10893.
* | | HDFFV-10903 merge dev changes to 1.10Allen Byrne2019-09-182-3/+11
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* | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2019-09-181-1/+1
|\ \ \ | |/ / | | | | | | | | | * commit '2ca63e3890ebdaee7dc835e5d995ff03a182940f': Snapshot version 1.10 release 6 (snap2) Update version to 1.10.6-snap3
| * | Merge branch 'hdf5_1_10' of ↵hdftest2019-09-171-0/+22
| |\ \ | | |/ | | | | | | ssh://bitbucket.hdfgroup.org:7999/~hdftest/hdf5_hft into hdf5_1_10
| * | Snapshot version 1.10 release 6 (snap2)hdftest2019-09-171-1/+1
| | | | | | | | | | | | Update version to 1.10.6-snap3
* | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2019-09-171-0/+22
|\ \ \ | | |/ | |/| | | | | | | * commit '406890277cbe92be1d68721a6fa115441ab1a726': Fixed a bug where we incorrectly pass a lock struct to fcntl for file locking instead of a pointer. (HDFFV-10892)
| * | Fixed a bug where we incorrectly pass a lock struct to fcntlDana Robinson2019-09-161-0/+22
| |/ | | | | | | for file locking instead of a pointer. (HDFFV-10892)
* | Merge S3 code from develop to 1.10Allen Byrne2019-09-131-1/+24
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* Merge pull request #1892 in HDFFV/hdf5 from ↵Vailin Choi2019-08-261-0/+14
| | | | | | | ~VCHOI/my_third_fork:bugfix/HDFFV-10873-assertion-v-oh--nmesgs-failed to develop * commit '021919206df7764f951037ae76ccae006b2eea99': Fixed the assertion failure for HDFFV-10873.
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