| Commit message (Collapse) | Author | Age | Files | Lines |
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Bug fix
Description:
The MPI_File_set_size() routine on ASCI Red is not able to extend files
so that they are larger than 2GB.
Solution:
Add an extra macro which controls whether MPI_File_set_size() can handle
>2GB offsets or if our "older" way of reading a byte, then writing a byte at
the appropriate offset should be used.
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
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Code cleanup, etc.
Description:
Generalize Ray's datatype fixes to handle packing compound datatypes which
are the base type of an array or variable-length type, etc.
Also track "packedness" of a compound datatype from it's creation, instead
of only setting the 'packed' flag after the datatype was explicitly packed.
Updated docs to reflect that a compound datatype is allowed to grow (but
not shrink).
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
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Bug fix.
Description:
Correct bug where a file opened twice, once with read-write permission
and once with read-only permission would cause closing the file with the
read-only file ID to fail because it was trying to flush information out
of the file.
Solution:
Check the permissions on file IDs that are being closed and only flush
when the particular file ID was opened with write permission.
Platforms tested:
FreeBSD 4.9 (sleipnir)
too small to need h5committest
Misc. update:
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Bug fix
Description:
The VFL driver ID in a file's access proprty list wasn't being reference
counted correctly, causing the VFL driver to get prematurely closed after
several calls to "H5Pget_access_plist->H5Pclose".
Solution:
Increment VFL driver ID reference count when copy of file's access property
list is made in H5Pget_access_plist()
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
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Bug Fix and code cleanup
Description:
Correct error in H5T_detect_class that was causing nested compound datatypes
with to not detect the datatype class of fields correctly, which caused errors
with fill-values, variable-length datatypes and chunks later on.
Return the rank of the array datatype from H5Tget_array_dims(), like
H5Sget_dims().
Lots of cleanups to datatype code, to make the handling of arrays, compound
types, variable-length strings and sequences and enumerated types more
consistent and robust.
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
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Bug fix
Description:
When datasets are deleted from a file, they are removed from the sieve
buffer, but instead of invalidating only the part of the sieve buffer affected,
the sieve buffer code would throw away the entire sieve buffer, potentially
including other raw data in the buffer that hadn't been written to disk yet.
Solution:
Improve the sieve buffer clearing code to handle partial invalidations.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
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updated.
Description:
Solution:
Platforms tested:
Misc. update:
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Bug fix
Description:
H5Gget_objname_by_idx should allow NULL for the 'name' parameter, to allow
for querying for the name's length.
Solution:
Allow NULL for the 'name' parameter, the internal functions were already
ready to handle that case.
Clean up RM information about H5Gget_objname_by_idx and
H5Gget_objtype_by_idx also.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
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Update release notes with bugfix info.
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Bug fix
Description:
H5Gget_num_objs, H5Gget_objname_by_idx and H5Gget_objtype_by_idx were
only accepting a group ID, instead of a location ID, as our documentation for
them stated.
Solution:
Allow them to accept a location ID.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
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Bug fix
Description:
I/O on chunked datasets with a scalar dataspace for the memory dataspace
was not working correctly.
Solution:
Translate the scalar dataspace into a n-dimensional (where n is the number
of dimensions of the file's dataspace) dataspace of dimensions 1x1x1...
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest (modulo modi4 which is not working correctly)
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Bug fix
Description:
Linking and unlinking objects with multiple internal and/or trailing '/'s
was not handled well in the library.
Solution:
"Normalize" strings by removing trailing '/'s and collapsing multiple
internal '/'s down into just one '/' before operating on the name.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committested
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Bug fix
Description:
Allow a user block to be "inserted" in front of a file (probably by
writing a validly-sized userblock to a new file and then appending another
HDF5 file to the new file).
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committested
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Update readme
Description:
Noted that hobj_ref_t's and the objno field in the H5G_stat_t structure
can now be directly compared for equality by applications.
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Update docs
Description:
Updated release notes with recent changes.
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Add more contents related to szip
Fix other bugs
Description:
Describe where to find szip, how to turn off szip compression.
Solution:
Platforms tested:
Misc. update:
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Bug fix
Description:
I/O on chunked datasets with point selections was not working correctly.
Solution:
Re-wrote some parts of raw data I/O routines that build the selections for
each chunk to correctly handle point selections.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
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updated.
Description:
Solution:
Platforms tested:
Misc. update:
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Bug fix
Description:
Fix bug with combination of fill-values, chunked datasets and
variable-length strings.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
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Bug fix
Description:
When a non-default indexed storage B-tree internal 'K' value is set by the
user, the chunked datasets created in that file (until it is closed) use the
user's 'K' value and the data can be accessed correctly, but the 'K' value is
not stored in the file.
However, once the file is closed and re-opened, the non-default 'K' value
is lost and the data in the chunked datasets will not be able to be accessed
correctly.
Solution:
Store the indexed storage B-tree internal 'K' value in the superblock.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
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Update install_windows.txt.
Description:
the description of using the allexample.dsw needs to be modified with
the addition of szip to HDF5 library.
Some typos are corrected.
Solution:
Platforms tested:
Misc. update:
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Bug fix
Description:
H5T_BKG_TEMP was accidentally removed from library code, but is used by
application's datatype conversion routines.
Solution:
Revert removal of H5T_BKG_TEMP.
Platforms tested:
h5committest
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Purpose: Maintenance after 1.6.0 release
Description: I cleaned the file. Please note that information about known
problems, config features, and tested platforms is there.
Please do not forget to modify those sections too!
Solution:
Platforms tested:
Misc. update:
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Update configuration
Description:
Now that we've split the tree (Yea!), change the main trunk back to debug
on and production off.
Also, change the version # to 1.7.0
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Updated some compiler information and the particular entry of
TFLOPS supports.
Description:
Solution:
Platforms tested:
Misc. update:
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Updated parallel installation instruction.
Description:
Solution:
Platforms tested:
Misc. update:
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Description: When make install prefix=NEW_DIR is used to specify
new location for the installed HDF5 library, h5redeploy
should be used to fix h5cc, etc. scripts. INSTALL file
suggested to fix scripts by hand.
Solution: Modified instructions to use h5redeploy.
Platforms tested: verbena
Misc. update:
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updated info for Code warrior (8.0 in W2000), renamed .NET to MSVC++.NET in Windows XP support
Description:
Solution:
Platforms tested:
Misc. update:
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Description: After talking to Barbara we decided to use
ftp://ftp.ncsa.uiuc.edu/HDF/HDF5/current/ location for
Intel and Cray Fortran source code patches.
Solution: Edited the file to point to new location.
Platforms tested:
Misc. update:
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Description: Added information about SZIP and few twicks here and there.
Solution:
Platforms tested:
Misc. update:
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update for release
Description:
Set the version information to 1.6.0-pre1 to get ready for
v1.6 release.
Platforms tested:
h5committested.
Misc. update:
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Purpose:
Insert new Release 1.6.0 "Supprted Configuration Features" table.
Platforms tested:
Not tested; viewed in vi.
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Purpose: Maintenance for the 1.6.0 release.
Description: I updated compilers information for Crays and added
h5fc and h5c++ to the new tools sections in REELASE.txt.
I added instructions for how to build HDF5 using Intel compilers
on Windows.
Solution:
Platforms tested:
Misc. update:
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Update
Description:
Reported that the PGI C++ compiler fails to compile the C++ tests
correctly...
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Update
Description:
Updated the MPE feature mention so that it says "--with-mpe" instead
of "--enable-mpe"
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Description: Bumped version number for 1.5.63 after creating a tar ball
for the next round of testing
Solution:
Platforms tested:
Misc. update:
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Update
Description:
HP-UX Fortran parallel works now.
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Update
Description:
Verified that Intel FOrtran works after much hacking...
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Update
Description:
Updated with newest information for Intel on Linux.
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Purpose: Maintenance
Description: Bumped the version number to 1.5.62 after creating
a tar ball for the fourth round of testing.
Solution: run bin/h5vers -s scipt on arabica
Platforms tested: N/A
Misc. update:
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Bump version # after another private snapshot for SAF team.
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Bump version # after creating private snapshot.
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Purpose: Maintenance for the third round of testing
Description: Increased the version number to 1.5.59 after creating
a tar ball for testing.
Solution:
Platforms tested:
Misc. update:
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Bump version number after making snapshot
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Bug fix
Description:
The dataset's modification time was getting set whenever raw data was
written with H5Dwrite. Unfortunately, this is a metadata change (which are
required to be performed collectively) and H5Dwrite may be called independently
from a parallel program, resulting in metadata cache corruption and/or program
hangs.
Solution:
Don't update the modification time when raw data it written. :-(
Platforms tested:
FreeBSD 4.8 (sleipnir) w/parallel
h5committest
Misc. update:
Noted in release notes and also sent to Frank for updating the docs.
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Code cleanup/new features.
Description:
Clean up whitespace & formatting.
Make the -S (simple) output display a dataset's modification time in UTC
rather than local timezone.
Display variable-length datatype information.
Simplified & enhanced bitfield datatype information displayed.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
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